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Updated on Jun 12, 2016

This page is a summary of all the Mutation Annotation Format (MAF) files available at TCGA through the Data Portal or FTP access, and is a step towards allowing the TCGA community to understand what MAF files exist. See TCGA MAF Dashboard for more information. The files in the Current section are those that are considered the most up to date. However, some MAF files are being maintained outside of the normal TCGA system, these are in the Not in database sections. The Old MAF files section represents a historical record of past MAF file submissions. In some cases, these files are obsolete and no longer supported and in others they have been superseded by later submissions. In addition to the MAF files available through the portal, there are MAF files associated with TCGA publications, these are available for download from the publication pages. Be aware that MAF files change on a regular basis, so this summary may differ from what you find. For a quick tutorial on the different ways to access MAF files, visit Accessing MAF Files.

Any files marked as "Controlled" in the Access Type column will require appropriate access privileges. See Access Tiers on the Data Portal for instructions on how to gain access to controlled data. Files marked as "Open" have no access restrictions.

The Tumor and Normal sample counts are the number of unique barcodes of each type found in that MAF file.

Tab-delimited versions of this page are saved as attachments

Current MAF Files

ACC: Adrenocortical carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf35:35Availableversion 2.4hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_Cont_curated.Level_2.1.0.0Protected05-DEC-13ce575dc4801b3016297119cc5fc6f775/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/acc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_Cont_curated.Level_2.1.0.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf90:90Availableversion 2.4hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_curated.Level_2.1.0.0Public05-DEC-132af7f17e683f4b2b35b5dcc45d13104f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_curated/mutations/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_curated.Level_2.1.0.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf
An_TCGA_ACC_External_capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf91:91Availableversion 2.4broad.mit.edu_ACC.IlluminaGA_DNASeq_curated.Level_2.1.0.0Public03-MAR-148960de8eaddf25b8256a23a4c7cd761f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_ACC.IlluminaGA_DNASeq_curated.Level_2.1.0.0/An_TCGA_ACC_External_capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf
ucsc.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf91:91Availableversion 2.4ucsc.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected10-MAR-1418f6285f611c2a3fb8bffcce3ee80b3c/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/acc/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf90:90Availableversion 2.4hgsc.bcm.edu_ACC.Mixed_DNASeq_curated.Level_2.1.1.0Public29-SEP-140851ed2831c86203b61dfd0f77d30737/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_ACC.Mixed_DNASeq_curated.Level_2.1.1.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf90:90Availableversion 2.4hgsc.bcm.edu_ACC.Mixed_DNASeq_Cont_curated.Level_2.1.1.0Protected29-SEP-1415c5b49a632020dcfd3a53fe64c35d10/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/acc/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_ACC.Mixed_DNASeq_Cont_curated.Level_2.1.1.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf91:91Availableversion 2.4hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_automated.Level_2.1.3.0Public29-SEP-15bb57693890416f2ff3cb3600826c0cfd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_automated.Level_2.1.3.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf91:91Availableversion 2.4hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.3.0Protected29-SEP-157fc2bdb23944ed9d4316af2015f891c4/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/acc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.3.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf
bcgsc.ca_ACC.IlluminaHiSeq_DNASeq.1.somatic.maf92:92Availableversion 2.4bcgsc.ca_ACC.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public27-APR-16acb7549304318d3b3d2d0a5466c47a16/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_ACC.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_ACC.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_ACC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf92:92Availableversion 2.4broad.mit.edu_ACC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public31-MAY-16c59b459f501da8fcf32eaa711619e81d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_ACC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_ACC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

BLCA: Bladder Urothelial Carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
BLCA-28-original.aggregated.tcga.somatic.maf28:28Availableversion 2.3broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.1.3.0Public09-JAN-13816f494b9caf23b944249651a7d2cded/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.1.3.0/BLCA-28-original.aggregated.tcga.somatic.maf
BLCA130_somatic_updated.aggregated.capture.tcga.uuid.curated.somatic.maf130:130Availableversion 2.4broad.mit.edu_BLCA.IlluminaGA_DNASeq_curated.Level_2.1.4.0Public21-APR-143c4584f577916f340e6c562d4a708a7e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq_curated.Level_2.1.4.0/BLCA130_somatic_updated.aggregated.capture.tcga.uuid.curated.somatic.maf
bcgsc.ca_BLCA.IlluminaHiSeq_DNASeq.1.somatic.maf405:404Availableversion 2.4bcgsc.ca_BLCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public23-APR-1521ad0a0738ae849c587abdf0c7704e99/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_BLCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_BLCA.IlluminaHiSeq_DNASeq.1.somatic.maf
bcgsc.ca_BLCA.IlluminaHiSeq_DNASeq.1.somatic.maf416:412Availableversion 2.4bcgsc.ca_BLCA.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public29-APR-16faef9c62ac5200ced887ecc21ca2714b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_BLCA.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_BLCA.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_BLCA_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf419:431Availableversion 2.4broad.mit.edu_BLCA.IlluminaGA_DNASeq_automated.Level_2.1.6.0Public27-MAY-16471bae2d300d8e766a89602fde87b224/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq_automated.Level_2.1.6.0/gsc_BLCA_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

BRCA: Breast invasive carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.3.0.somatic.maf776:801Availableversion 2.4genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.3.0Public24-JUN-135d6283c8e28f9c1e2ddaa55f4b773b88/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.3.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.3.0.somatic.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.1.1.0.curated.somatic.maf993:1032Availableversion 2.4genome.wustl.edu_BRCA.IlluminaGA_DNASeq_curated.Level_2.1.1.0Public06-FEB-14f823427c6ea3d520fb72379da8ba63dd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq_curated/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq_curated.Level_2.1.1.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.1.1.0.curated.somatic.maf
unc.edu_BRCA.Mixed_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf695:720Availableversion 2.4unc.edu_BRCA.Mixed_DNASeq_Cont_automated.Level_2.1.0.0Protected12-JUN-141cd306cab3d39921c465e2ea2e5e468d/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/brca/gsc/unc.edu/mixed_dnaseq_cont_automated/mutations_protected/unc.edu_BRCA.Mixed_DNASeq_Cont_automated.Level_2.1.0.0/unc.edu_BRCA.Mixed_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
genome.wustl.edu_BRCA.IlluminaHiSeq_DNASeq_automated.1.4.0.somatic.maf776:801Availableversion 2.4genome.wustl.edu_BRCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.4.0Public21-DEC-155d6283c8e28f9c1e2ddaa55f4b773b88/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_BRCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.4.0/genome.wustl.edu_BRCA.IlluminaHiSeq_DNASeq_automated.1.4.0.somatic.maf
gsc_BRCA_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf1092:1132Availableversion 2.4broad.mit.edu_BRCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public31-MAY-16b48a6f15d18fa60623dc6f2af14a9460/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_BRCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_BRCA_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_CESC_PAIR_Capture_All_Pairs.aggregated.capture.tcga.uuid.somatic.maf39:39Availableversion 2.3broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.4.0Public12-NOV-121b13e812e746b9149b15090b48d2de1e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.4.0/PR_TCGA_CESC_PAIR_Capture_All_Pairs.aggregated.capture.tcga.uuid.somatic.maf
bcgsc.ca_CESC.IlluminaHiSeq_DNASeq.1.somatic.maf199:198Availableversion 2.4bcgsc.ca_CESC.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public25-JUN-14c25bb0dbd47aead8aca1f70aa371cde0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_CESC.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_CESC.IlluminaHiSeq_DNASeq.1.somatic.maf
genome.wustl.edu_CESC.IlluminaGA_DNASeq_curated.Level_2.1.0.0.somatic.maf194:194Availableversion 2.4genome.wustl.edu_CESC.IlluminaGA_DNASeq_curated.Level_2.1.0.0Public18-AUG-14be5c5f59f91299f851a3e10eecce57d3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/genome.wustl.edu/illuminaga_dnaseq_curated/mutations/genome.wustl.edu_CESC.IlluminaGA_DNASeq_curated.Level_2.1.0.0/genome.wustl.edu_CESC.IlluminaGA_DNASeq_curated.Level_2.1.0.0.somatic.maf
ucsc.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.1.0.somatic.maf199:201Availableversion 2.4ucsc.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public05-SEP-14c03c6cbdd3b4debf8523cad737e678c6/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.1.0/ucsc.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.1.0.somatic.maf
ucsc.edu_CESC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf199:201Availableversion 2.4ucsc.edu_CESC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected05-SEP-14914f8a6559d32f6f9b79d14da2a3ed62/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/cesc/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_CESC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/ucsc.edu_CESC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf
genome.wustl.edu_CESC.IlluminaHiSeq_DNASeq_automated.1.3.0.somatic.maf192:192Availableversion 2.4genome.wustl.edu_CESC.IlluminaHiSeq_DNASeq_automated.Level_2.1.3.0Public13-JAN-16a302bcf4b77f9831febd022fe015770e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_CESC.IlluminaHiSeq_DNASeq_automated.Level_2.1.3.0/genome.wustl.edu_CESC.IlluminaHiSeq_DNASeq_automated.1.3.0.somatic.maf
gsc_CESC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf307:308Availableversion 2.4broad.mit.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.8.0Public26-MAY-16fdf1c2d248f8da7229e9f21bc95df96d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.8.0/gsc_CESC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

CHOL: Cholangiocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_CHOL.IlluminaHiSeq_DNASeq.1.somatic.maf36:36Availableversion 2.4bcgsc.ca_CHOL.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public10-DEC-1447268aa46006c53013466f740a3e1462/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/chol/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_CHOL.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_CHOL.IlluminaHiSeq_DNASeq.1.somatic.maf
ucsc.edu_CHOL.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf36:49Availableversion 2.4ucsc.edu_CHOL.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected23-DEC-14fafd9c0621da70c6c2160f1715ebd988/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/chol/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_CHOL.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_CHOL.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
ucsc.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf36:49Availableversion 2.4ucsc.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public23-DEC-14b44be3f2e6a994be766cc881a3143b2b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/chol/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq.1.somatic.maf36:36Availableversion 2.4hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public24-DEC-14ee6d4a3810593268b8038dfb13999ddd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/chol/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq.1.protected.maf36:36Availableversion 2.4hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected24-DEC-1458b52380bb079abefb34956a2932d318/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/chol/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq.1.protected.maf35:35Availableversion 2.4hgsc.bcm.edu_CHOL.Mixed_DNASeq_Cont_curated.Level_2.1.0.0Protected20-MAR-1571e6e6f172ea7eda40bcc271f401f168/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/chol/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_CHOL.Mixed_DNASeq_Cont_curated.Level_2.1.0.0/hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq.1.somatic.maf35:35Availableversion 2.4hgsc.bcm.edu_CHOL.Mixed_DNASeq_curated.Level_2.1.0.0Public20-MAR-158db4269d8aba6d8d397e2761e24e8e6e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/chol/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_CHOL.Mixed_DNASeq_curated.Level_2.1.0.0/hgsc.bcm.edu_CHOL.IlluminaGA_DNASeq.1.somatic.maf
bcgsc.ca_CHOL.IlluminaHiSeq_DNASeq.1.somatic.maf36:36Availableversion 2.4bcgsc.ca_CHOL.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public29-APR-164412d0eff1ffb27b0203bf3d740147f3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/chol/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_CHOL.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_CHOL.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_CHOL_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf36:49Availableversion 2.4broad.mit.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public31-MAY-169288f4c155d47f4cc090eee3312e09c2/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/chol/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.1.0/gsc_CHOL_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

COAD: Colon adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf220:221Availableversion 2.4hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.5.0Public18-JUN-13f29ee46da98b52ef822ac9bfac6df7bc/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.5.0/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.protected.maf182:182Availableversion 2.4hgsc.bcm.edu_COAD.IlluminaGA_DNASeq_Cont.Level_2.1.5.0Protected18-JUN-13959e4acad4b7b31e99d39c5e59b0f2f7/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/coad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont/mutations_protected/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq_Cont.Level_2.1.5.0/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf53:53Availableversion 2.4hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.7.0Public30-JUL-1301b6e9bae3a81836ffb039be8ca4ae2b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.7.0/hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf
gsc_COAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf423:454Availableversion 2.4broad.mit.edu_COAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public27-MAY-165feb43f91d1c6374721f0442d87a872e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_COAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_COAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

DLBC: Lymphoid Neoplasm Diffuse Large B-cell Lymphoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq.1.somatic.maf48:48Availableversion 2.4hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public29-SEP-15d9a9086ae669d0d403d544d540547d8c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/dlbc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq_automated.Level_2.1.1.0/hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq.1.protected.maf48:48Availableversion 2.4hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected29-SEP-15a1d507a393a89f4be491f8f103e6ce4d/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/dlbc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq.1.protected.maf
gsc_DLBC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf48:48Availableversion 2.4broad.mit.edu_DLBC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public31-MAY-164bb3c2d7c552fcd495daa0081882c5e7/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/dlbc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_DLBC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_DLBC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

ESCA: Esophageal carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_ESCA.IlluminaHiSeq_DNASeq.1.somatic.maf184:183Availableversion 2.4bcgsc.ca_ESCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public25-NOV-1452bdf5e059c4873edfc70b96d2318373/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/esca/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_ESCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_ESCA.IlluminaHiSeq_DNASeq.1.somatic.maf
ucsc.edu_ESCA.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf184:189Availableversion 2.4ucsc.edu_ESCA.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected03-DEC-144ed4f176197d521e189c27f05ce678af/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/esca/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_ESCA.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_ESCA.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
ucsc.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf184:189Availableversion 2.4ucsc.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public03-DEC-142af1a48c657f2c24edf92095ef706e7b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/esca/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
hgsc.bcm.edu_ESCA.IlluminaGA_DNASeq.1.protected.maf183:183Availableversion 2.4hgsc.bcm.edu_ESCA.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected09-DEC-1418b6899e1f109635b31cc2fca775915e/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/esca/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_ESCA.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_ESCA.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_ESCA.IlluminaGA_DNASeq.1.somatic.maf183:183Availableversion 2.4hgsc.bcm.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public09-DEC-14dfef4bf7b748b4877c36fd911577b793/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/esca/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_ESCA.IlluminaGA_DNASeq.1.somatic.maf
genome.wustl.edu_ESCA.IlluminaHiSeq_DNASeq_automated.1.1.0.somatic.maf185:185Availableversion 2.4genome.wustl.edu_ESCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0Public28-SEP-159676eb185183425c1ca70bc8d04cace7/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/esca/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_ESCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0/genome.wustl.edu_ESCA.IlluminaHiSeq_DNASeq_automated.1.1.0.somatic.maf
bcgsc.ca_ESCA.IlluminaHiSeq_DNASeq.1.somatic.maf185:184Availableversion 2.4bcgsc.ca_ESCA.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public03-MAY-167503567836edcadd79d35ee7c7505f25/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/esca/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_ESCA.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_ESCA.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_ESCA_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf185:190Availableversion 2.4broad.mit.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public31-MAY-16f3e1eb5f102527f91192896fb8910e37/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/esca/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.1.0/gsc_ESCA_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

FPPP: FFPE Pilot Phase II

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_FPPP.IlluminaGA_DNASeq.1.somatic.maf89:52Availableversion 2.4hgsc.bcm.edu_FPPP.Mixed_DNASeq_automated.Level_2.1.0.0Public13-JAN-15bf10359af08853b78d6b9c3d58b6d850/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/fppp/gsc/hgsc.bcm.edu/mixed_dnaseq_automated/mutations/hgsc.bcm.edu_FPPP.Mixed_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_FPPP.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_FPPP.IlluminaGA_DNASeq.1.protected.maf89:52Availableversion 2.4hgsc.bcm.edu_FPPP.Mixed_DNASeq_Cont_automated.Level_2.1.0.0Protected13-JAN-156e4dfc8542750a308779919ec631fd01/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/fppp/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_FPPP.Mixed_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_FPPP.IlluminaGA_DNASeq.1.protected.maf

GBM: Glioblastoma multiforme

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_GBM.ABI.1.somatic.maf155:146Availableunknownhgsc.bcm.edu_GBM.ABI.1.24.0Public19-NOV-089b050305e009b32c87f9eeedc895c4af/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.24.0/hgsc.bcm.edu_GBM.ABI.1.somatic.maf
broad.mit.edu_GBM.ABI.1.somatic.maf149:148Availableunknownbroad.mit.edu_GBM.ABI.1.32.0Public29-APR-09f7045abf7783a301e04b8b45032ad4ca/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.32.0/broad.mit.edu_GBM.ABI.1.somatic.maf
genome.wustl.edu_GBM.ABI.53.somatic.maf158:158Availableunknowngenome.wustl.edu_GBM.ABI.53.12.0Public16-JUN-09c7272b7f019390b4391a005e1f28f36b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.12.0/genome.wustl.edu_GBM.ABI.53.somatic.maf
step4_gbm_liftover.aggregated.capture.tcga.uuid.maf2.4.migrated.somatic.maf291:291Availableversion 2.3broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.100.1.0Public27-JUN-133de36db3e402eaa855c346d0ec5f7b6e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.100.1.0/step4_gbm_liftover.aggregated.capture.tcga.uuid.maf2.4.migrated.somatic.maf
ucsc.edu_GBM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf316:316Availableversion 2.4ucsc.edu_GBM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected18-JUN-15571516c4c5f32253d0178e96d9a7e446/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_GBM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/ucsc.edu_GBM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf
ucsc.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.1.0.somatic.maf315:315Availableversion 2.4ucsc.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public18-JUN-1548d92130577efbefe6f5b39ec368dd00/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.1.0/ucsc.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.1.0.somatic.maf
mdanderson.org_GBM.IlluminaGA_DNASeq.Level_2.1.somatic.maf302:302Availableversion 2.4.1mdanderson.org_GBM.Mixed_DNASeq_automated.Level_2.1.1.0Public03-SEP-15a9b5394e6336cad6bbb7b89935f819d9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/mdanderson.org/mixed_dnaseq_automated/mutations/mdanderson.org_GBM.Mixed_DNASeq_automated.Level_2.1.1.0/mdanderson.org_GBM.IlluminaGA_DNASeq.Level_2.1.somatic.maf
mdanderson.org_GBM.IlluminaGA_DNASeq.Level_2.1.6.somatic.maf316:316Availableversion 2.4mdanderson.org_GBM.IlluminaGA_DNASeq.Level_2.1.6.0Public03-SEP-1520049fd6097b5e6bed750a65e356320e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/mdanderson.org/illuminaga_dnaseq/mutations/mdanderson.org_GBM.IlluminaGA_DNASeq.Level_2.1.6.0/mdanderson.org_GBM.IlluminaGA_DNASeq.Level_2.1.6.somatic.maf
bcgsc.ca_GBM.IlluminaHiSeq_DNASeq.1.somatic.maf406:396Availableversion 2.4bcgsc.ca_GBM.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-161e42c4a6a485644d5e0d8b8d20c26900/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_GBM.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_GBM.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_GBM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf498:487Availableversion 2.4broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public27-MAY-164471dae1ea739f9a5e758e9d8907ff7b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_GBM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

HNSC: Head and Neck squamous cell carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_HNSC_PAIR_Capture_TP-NT_TP-NB.aggregated.capture.tcga.uuid.somatic.maf306:364Availableversion 2.3broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.1.0.0Public12-OCT-1290c3511c08006f651117e369e5a3c243/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.1.0.0/PR_TCGA_HNSC_PAIR_Capture_TP-NT_TP-NB.aggregated.capture.tcga.uuid.somatic.maf
bcgsc.ca_HNSC.IlluminaHiSeq_DNASeq.1.somatic.maf512:510Availableversion 2.4bcgsc.ca_HNSC.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public13-APR-1521d7f9b93ae750a7b08acf9579c8b744/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_HNSC.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_HNSC.IlluminaHiSeq_DNASeq.1.somatic.maf
HNSC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf512:569Availableversion 2.4broad.mit.edu_HNSC.IlluminaGA_DNASeq_automated.Level_2.1.6.0Public04-SEP-15cdd2dada980121995b06099672f550ab/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_HNSC.IlluminaGA_DNASeq_automated.Level_2.1.6.0/HNSC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf
pair_set_279_freeze_Mar262013.aggregated.capture.tcga.uuid.curated.somatic.maf279:279Availableversion 2.4broad.mit.edu_HNSC.IlluminaGA_DNASeq_curated.Level_2.1.6.0Public06-OCT-15f5d442f5740b52fd378c1c9fc38a8763/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_HNSC.IlluminaGA_DNASeq_curated.Level_2.1.6.0/pair_set_279_freeze_Mar262013.aggregated.capture.tcga.uuid.curated.somatic.maf
bcgsc.ca_HNSC.IlluminaHiSeq_DNASeq.1.somatic.maf512:510Availableversion 2.4bcgsc.ca_HNSC.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public03-MAY-1679714dd26fe48b4296c3ea6977c85d05/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_HNSC.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_HNSC.IlluminaHiSeq_DNASeq.1.somatic.maf

KICH: Kidney Chromophobe

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
BCM-KICH-TCGA.broad_calls.aggregated.capture.tcga.uuid.somatic.maf66:66Availableversion 2.4broad.mit.edu_KICH.IlluminaGA_DNASeq.Level_2.1.0.0Public03-SEP-135c5cb0f9e0b65f045892ce02d514eca0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KICH.IlluminaGA_DNASeq.Level_2.1.0.0/BCM-KICH-TCGA.broad_calls.aggregated.capture.tcga.uuid.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.mitochondria.1.somatic.maf36:36Availableversion 2.4hgsc.bcm.edu_KICH.Mixed_DNASeq_curated.Level_2.1.1.0Public07-OCT-1455bcc036869792204352b9be3ace07d8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_KICH.Mixed_DNASeq_curated.Level_2.1.1.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.mitochondria.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf66:66Availableversion 2.4hgsc.bcm.edu_KICH.Mixed_DNASeq_curated.Level_2.1.1.0Public07-OCT-14aeb06b199e6269e5acd8252516c20c12/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_KICH.Mixed_DNASeq_curated.Level_2.1.1.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf66:66Availableversion 2.4hgsc.bcm.edu_KICH.Mixed_DNASeq_Cont_curated.Level_2.1.1.0Protected07-OCT-148f5be5b4f26829dc9405947daf0d541f/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kich/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_KICH.Mixed_DNASeq_Cont_curated.Level_2.1.1.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.mitochondria.1.protected.maf53:53Availableversion 2.4hgsc.bcm.edu_KICH.Mixed_DNASeq_Cont_curated.Level_2.1.1.0Protected07-OCT-144ed557d306528bef6c1cbf138a36e07b/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kich/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_KICH.Mixed_DNASeq_Cont_curated.Level_2.1.1.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.mitochondria.1.protected.maf
bcgsc.ca_KICH.IlluminaHiSeq_DNASeq.1.somatic.maf66:66Availableversion 2.4bcgsc.ca_KICH.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public04-MAR-1523b65ca8fb46dcdab06faf62e37cb11f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_KICH.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_KICH.IlluminaHiSeq_DNASeq.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf66:66Availableversion 2.4hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public29-SEP-15fb2776537d76b7a0358cabf332fba84d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_automated.Level_2.1.4.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf66:66Availableversion 2.4hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont_automated.Level_2.1.4.0Protected29-SEP-15608d5bb68525e651e5e848f8346d17a0/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont_automated.Level_2.1.4.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf
bcgsc.ca_KICH.IlluminaHiSeq_DNASeq.1.somatic.maf66:66Availableversion 2.4bcgsc.ca_KICH.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-16ae8ceac0d03f015b2cdfee1dadfb44da/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_KICH.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_KICH.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_KICH_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf66:66Availableversion 2.4broad.mit.edu_KICH.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public01-JUN-1621c875da0e5a4acd7cb491d54594aa7a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_KICH.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_KICH_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

KIRC: Kidney renal clear cell carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_KIRC.Mixed_DNASeq.1.protected.maf419:419Availableversion 2.4hgsc.bcm.edu_KIRC.Mixed_DNASeq_Cont.Level_2.1.2.0Protected08-NOV-1378bcaf41978b973caff6ce5840217433/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirc/gsc/hgsc.bcm.edu/mixed_dnaseq_cont/mutations_protected/hgsc.bcm.edu_KIRC.Mixed_DNASeq_Cont.Level_2.1.2.0/hgsc.bcm.edu_KIRC.Mixed_DNASeq.1.protected.maf
hgsc.bcm.edu_KIRC.Mixed_DNASeq.1.somatic.maf491:490Availableversion 2.4hgsc.bcm.edu_KIRC.Mixed_DNASeq.Level_2.1.2.0Public08-NOV-1359a2c6e62d405f2ec7115f87b71bbd34/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/hgsc.bcm.edu/mixed_dnaseq/mutations/hgsc.bcm.edu_KIRC.Mixed_DNASeq.Level_2.1.2.0/hgsc.bcm.edu_KIRC.Mixed_DNASeq.1.somatic.maf
hgsc.bcm.edu_KIRC.IlluminaGA_DNASeq.1.somatic.maf349:349Availableversion 2.4hgsc.bcm.edu_KIRC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public05-JAN-16a0fb892adda1b8100bbd67ea0432b898/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_KIRC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_KIRC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KIRC.IlluminaGA_DNASeq.1.protected.maf349:349Availableversion 2.4hgsc.bcm.edu_KIRC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected05-JAN-168ca4116065fe74635b99107c193190a0/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_KIRC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_KIRC.IlluminaGA_DNASeq.1.protected.maf
gsc_KIRC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf417:431Availableversion 2.4broad.mit.edu_KIRC.IlluminaGA_DNASeq_automated.Level_2.1.6.0Public27-MAY-16442a562a194c992a915c32c2934b1eee/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq_automated.Level_2.1.6.0/gsc_KIRC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

KIRP: Kidney renal papillary cell carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_KIRP_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf115:125Availableversion 2.4broad.mit.edu_KIRP.IlluminaGA_DNASeq.Level_2.0.3.0Public15-JUL-13eeaedd03fcd15abecd3fb3347742ef4b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRP.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_KIRP_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
An_TCGA_KIRP_MultiCenterCalling_capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf171:190Availableversion 2.4broad.mit.edu_KIRP.IlluminaGA_DNASeq_curated.Level_2.1.1.0Public10-FEB-147a7e7afd58a81fb2d9c074aed5e30835/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_KIRP.IlluminaGA_DNASeq_curated.Level_2.1.1.0/An_TCGA_KIRP_MultiCenterCalling_capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf168:168Availableversion 2.4hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq_curated.Level_2.1.0.0Public24-FEB-14f7623df4ce815e6f1142cfdbc300edb4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/hgsc.bcm.edu/illuminaga_dnaseq_curated/mutations/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq_curated.Level_2.1.0.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf31:31Availableversion 2.4hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq_Cont_curated.Level_2.1.0.0Protected24-FEB-1419387d2417ca09638dcabe1c5cd2abea/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirp/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq_Cont_curated.Level_2.1.0.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf
ucsc.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0.protected.maf171:190Availableversion 2.4ucsc.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0Protected09-SEP-148e460286f266c9a244621b3f5b61774e/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirp/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0/ucsc.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0.protected.maf
ucsc.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.2.0.somatic.maf171:190Availableversion 2.4ucsc.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public09-SEP-14a88696ee08dd89281e2ec9e87e58e262/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.2.0/ucsc.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.2.0.somatic.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf161:161Availableversion 2.4hgsc.bcm.edu_KIRP.Mixed_DNASeq_Cont_curated.Level_2.1.3.0Protected02-OCT-140d54c5f8ae4645f17508a41b9a2c371c/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirp/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_KIRP.Mixed_DNASeq_Cont_curated.Level_2.1.3.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf161:161Availableversion 2.4hgsc.bcm.edu_KIRP.Mixed_DNASeq_curated.Level_2.1.3.0Public02-OCT-143ddcaf0557a6fb8b8e553a950991b263/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_KIRP.Mixed_DNASeq_curated.Level_2.1.3.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf282:282Availableversion 2.4hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected20-OCT-15d878f1d5fae55fe257774ac59f2a7280/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirp/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf282:282Availableversion 2.4hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public20-OCT-153e069d1dc542491061a3ee1f1ad3b12a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf
gsc_KIRP_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf293:319Availableversion 2.4broad.mit.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.6.0Public31-MAY-160d072268c8f64409453f199b16de0ea3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.6.0/gsc_KIRP_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

LAML: Acute Myeloid Leukemia

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0.somatic.maf197:197Availableversion 2.4genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.16.0Public02-DEC-13ab6c720a25fbf438a78133a0011469ec/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.16.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0.somatic.maf
genome.wustl.edu_LAML.IlluminaHiSeq_DNASeq_automated.1.1.0.somatic.maf197:197Availableversion 2.4genome.wustl.edu_LAML.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0Public14-DEC-15ab6c720a25fbf438a78133a0011469ec/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_LAML.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0/genome.wustl.edu_LAML.IlluminaHiSeq_DNASeq_automated.1.1.0.somatic.maf
bcgsc.ca_LAML.IlluminaHiSeq_DNASeq.1.somatic.maf128:128Availableversion 2.4bcgsc.ca_LAML.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-166f63a22ea58312133e5194df0e2526e1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_LAML.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_LAML.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_LAML_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf151:151Availableversion 2.4broad.mit.edu_LAML.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public31-MAY-16d1ee37b7bcf0b20e545b87eec0c909f6/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LAML.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_LAML_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

LGG: Brain Lower Grade Glioma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf220:220Availableversion 2.4broad.mit.edu_LGG.IlluminaGA_DNASeq.Level_2.0.3.0Public16-JUL-1324efbeb5137d634e7876be19b470c242/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
hgsc.bcm.edu_LGG.IlluminaGA_DNASeq.1.somatic.maf289:289Availableversion 2.4hgsc.bcm.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public10-DEC-1371d9b28366b1dd5eab869b8ddcae8a49/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_LGG.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_LGG.IlluminaGA_DNASeq.1.protected.maf30:30Availableversion 2.4hgsc.bcm.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected10-DEC-138d2562558c975c3e054b9ee1026d527f/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lgg/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_LGG.IlluminaGA_DNASeq.1.protected.maf
LGG_FINAL_ANALYSIS.aggregated.capture.tcga.uuid.curated.somatic.maf286:286Availableversion 2.4broad.mit.edu_LGG.IlluminaGA_DNASeq_curated.Level_2.1.4.0Public05-JAN-1523e38e6dfb40f25fe8e6d5233dade590/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq_curated.Level_2.1.4.0/LGG_FINAL_ANALYSIS.aggregated.capture.tcga.uuid.curated.somatic.maf
ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.4.0.somatic.maf516:516Availableversion 2.4ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public18-JUN-15a16741f8ba0aec7f46bda4b7db810e14/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.4.0/ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.4.0.somatic.maf
ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.4.0.protected.maf516:516Availableversion 2.4ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.4.0Protected18-JUN-1567261bb52ee3ffdd0eee8b9fcb6e6e28/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lgg/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.4.0/ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.4.0.protected.maf
mdanderson.org_LGG.IlluminaGA_DNASeq.Level_2.1.somatic.maf507:507Availableversion 2.4.1mdanderson.org_LGG.Mixed_DNASeq_automated.Level_2.1.1.0Public03-SEP-153a76dcb6521c8e43b2020c09c5c6c2cd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/mdanderson.org/mixed_dnaseq_automated/mutations/mdanderson.org_LGG.Mixed_DNASeq_automated.Level_2.1.1.0/mdanderson.org_LGG.IlluminaGA_DNASeq.Level_2.1.somatic.maf
mdanderson.org_LGG.IlluminaGA_DNASeq.Level_2.1.6.somatic.maf516:516Availableversion 2.4mdanderson.org_LGG.IlluminaGA_DNASeq.Level_2.1.6.0Public03-SEP-15eeadec91ee669d7d1070b2035a801fb3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/mdanderson.org/illuminaga_dnaseq/mutations/mdanderson.org_LGG.IlluminaGA_DNASeq.Level_2.1.6.0/mdanderson.org_LGG.IlluminaGA_DNASeq.Level_2.1.6.somatic.maf
LGG_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf533:516Availableversion 2.4broad.mit.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.6.0Public04-JAN-16a47c5cb84436069da8d3b2c52419d3b8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.6.0/LGG_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf
bcgsc.ca_LGG.IlluminaHiSeq_DNASeq.1.somatic.maf533:516Availableversion 2.4bcgsc.ca_LGG.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-16adfd4e3070f5a75c14dda32d3a959a0a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_LGG.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_LGG.IlluminaHiSeq_DNASeq.1.somatic.maf

LIHC: Liver hepatocellular carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_LIHC.IlluminaHiSeq_DNASeq.1.somatic.maf202:202Availableversion 2.4bcgsc.ca_LIHC.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public09-MAY-14869a433c3927e1bc6d1d80ed257f976e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_LIHC.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_LIHC.IlluminaHiSeq_DNASeq.1.somatic.maf
hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.somatic.maf198:198Availableversion 2.4hgsc.bcm.edu_LIHC.Mixed_DNASeq_curated.Level_2.1.2.0Public09-SEP-14b8d47374da88802fb8d1bd904d88df8f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_LIHC.Mixed_DNASeq_curated.Level_2.1.2.0/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.protected.maf198:198Availableversion 2.4hgsc.bcm.edu_LIHC.Mixed_DNASeq_Cont_curated.Level_2.1.2.0Protected09-SEP-141538666d9acc0bb04073eaa43d0de6b2/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lihc/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_LIHC.Mixed_DNASeq_Cont_curated.Level_2.1.2.0/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.protected.maf
ucsc.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.1.0.somatic.maf202:236Availableversion 2.4ucsc.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public09-SEP-14ab0b00c6cd81f333250e27c6f88e3ca8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.1.0/ucsc.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.1.0.somatic.maf
ucsc.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf202:236Availableversion 2.4ucsc.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected09-SEP-14157347534e9cf1215aebac27d2536ff0/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lihc/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/ucsc.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf
hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.somatic.maf373:373Availableversion 2.4hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public07-OCT-158abf315525e8762004b82a5d4759850d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.2.0/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.protected.maf373:373Availableversion 2.4hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0Protected07-OCT-1518ec25770cff9fa43aff0789eb3429a3/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lihc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.protected.maf
bcgsc.ca_LIHC.IlluminaHiSeq_DNASeq.1.somatic.maf378:375Availableversion 2.4bcgsc.ca_LIHC.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public27-APR-167b2d69161a45f9e0d39264ffff586133/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_LIHC.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_LIHC.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_LIHC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf377:410Availableversion 2.4broad.mit.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public02-JUN-16754c06cb4b4c5f2ec3ccf357c8494e9a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.1.0/gsc_LIHC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

LUAD: Lung adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_LUAD_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf538:583Availableversion 2.4broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.4.0Public16-JUL-13fd7a7ba47df205795946a501c11208cb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/luad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.4.0/PR_TCGA_LUAD_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
AN_TCGA_LUAD_PAIR_capture_freeze_FINAL_230.aggregated.capture.tcga.uuid.curated.somatic.maf230:230Availableversion 2.4broad.mit.edu_LUAD.IlluminaGA_DNASeq_curated.Level_2.1.6.0Public25-NOV-1482873d928fd40677e8ef0de26ae8c63c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/luad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_LUAD.IlluminaGA_DNASeq_curated.Level_2.1.6.0/AN_TCGA_LUAD_PAIR_capture_freeze_FINAL_230.aggregated.capture.tcga.uuid.curated.somatic.maf
gsc_LUAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf630:657Availableversion 2.4broad.mit.edu_LUAD.IlluminaGA_DNASeq_automated.Level_2.1.7.0Public01-JUN-165ff4071221cf3b8527393672d4ee90c5/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/luad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LUAD.IlluminaGA_DNASeq_automated.Level_2.1.7.0/gsc_LUAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

LUSC: Lung squamous cell carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
step4_LUSC_Paper_v8.aggregated.tcga.maf2.4.migrated.somatic.maf178:178Availableversion 2.3broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.100.1.0Public27-JUN-131a49acfb045eb3e56be19e6a97e587dc/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.100.1.0/step4_LUSC_Paper_v8.aggregated.tcga.maf2.4.migrated.somatic.maf
unc.edu_LUSC.Mixed_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf176:176Availableversion 2.4unc.edu_LUSC.Mixed_DNASeq_Cont_automated.Level_2.1.0.0Protected12-JUN-1413065acb06616e6d98f54155420d718e/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lusc/gsc/unc.edu/mixed_dnaseq_cont_automated/mutations_protected/unc.edu_LUSC.Mixed_DNASeq_Cont_automated.Level_2.1.0.0/unc.edu_LUSC.Mixed_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
bcgsc.ca_LUSC.IlluminaHiSeq_DNASeq.1.somatic.maf497:497Availableversion 2.4bcgsc.ca_LUSC.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-160b842f46c8a64588625e73b88148155f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_LUSC.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_LUSC.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_LUSC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf548:581Availableversion 2.4broad.mit.edu_LUSC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public26-MAY-164e1ea018368bb0526534488f266fa9a7/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_LUSC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

MESO: Mesothelioma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_MESO.IlluminaHiSeq_DNASeq.1.somatic.maf83:83Availableversion 2.4bcgsc.ca_MESO.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public12-AUG-154406983e06278573c8cdd4d509f55e0a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/meso/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_MESO.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_MESO.IlluminaHiSeq_DNASeq.1.somatic.maf
sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_automated.Level_2.1.2.0.somatic.maf83:83Availableversion 2.4sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_automated.Level_2.1.2.0Public09-OCT-15ad5493904503bfa001f79507ced142e4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/meso/gsc/sanger.ac.uk/illuminahiseq_dnaseq_automated/mutations/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_automated.Level_2.1.2.0/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_automated.Level_2.1.2.0.somatic.maf
sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_Cont_automated.Level_2.1.2.0.protected.maf83:83Availableversion 2.4sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_Cont_automated.Level_2.1.2.0Protected12-OCT-15ec45ad905480e500134f020c54c65f19/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/meso/gsc/sanger.ac.uk/illuminahiseq_dnaseq_cont_automated/mutations_protected/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_Cont_automated.Level_2.1.2.0/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_Cont_automated.Level_2.1.2.0.protected.maf
MESO_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf83:83Availableversion 2.4broad.mit.edu_MESO.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public22-FEB-16a385c26254307f0a09a061acae60afc5/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/meso/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_MESO.IlluminaGA_DNASeq_automated.Level_2.1.0.0/MESO_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

OV: Ovarian serous cystadenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
broad.mit.edu_OV.ABI.2.somatic.maf23:23Availableunknownbroad.mit.edu_OV.ABI.2.4.0Public29-APR-096599d214f618e102653af8dfe5a78f94/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/abi/tracerel/broad.mit.edu_OV.ABI.2.4.0/broad.mit.edu_OV.ABI.2.somatic.maf
hgsc.bcm.edu_OV.ABI.1.somatic.maf22:22Availableunknownhgsc.bcm.edu_OV.ABI.1.2.0Public21-MAY-09a7f87329b70f219c8ed4592350775dac/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_OV.ABI.1.2.0/hgsc.bcm.edu_OV.ABI.1.somatic.maf
genome.wustl.edu_OV.ABI.26.0.0.somatic.maf23:23Availableunknowngenome.wustl.edu_OV.ABI.26.0.0Public11-DEC-09fafbaeaec4060f1df90d35b8ecc726a4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_OV.ABI.26.0.0/genome.wustl.edu_OV.ABI.26.0.0.somatic.maf
genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.0.0.somatic.maf142:142Availableversion 2.3genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.1.0Public09-OCT-120c631c534ece85903f8fe198bde9a26f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.1.0/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.0.0.somatic.maf
genome.wustl.edu_OV.IlluminaGA_DNASeq.1.3.somatic.maf88:88Availableversion 2.4genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.3.0Public24-JUN-1311f71bc7c6fe568913b5a140a1793070/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.3.0/genome.wustl.edu_OV.IlluminaGA_DNASeq.1.3.somatic.maf
step4_ov_liftover.aggregated.capture.tcga.uuid.maf2.4.migrated.somatic.maf142:142Availableversion 2.3broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.100.1.0Public27-JUN-135812b6ea88c8005e85cfbf747581f71f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.100.1.0/step4_ov_liftover.aggregated.capture.tcga.uuid.maf2.4.migrated.somatic.maf
hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf91:91Availableversion 2.4hgsc.bcm.edu_OV.SOLiD_DNASeq_curated.Level_2.1.7.0Public28-JUL-144feca0fb9fb9dddbcd04d76f6ee886c5/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/hgsc.bcm.edu/solid_dnaseq_curated/mutations/hgsc.bcm.edu_OV.SOLiD_DNASeq_curated.Level_2.1.7.0/hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf
genome.wustl.edu_OV.IlluminaHiSeq_DNASeq_automated.1.1.0.somatic.maf88:88Availableversion 2.4genome.wustl.edu_OV.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0Public15-DEC-1511f71bc7c6fe568913b5a140a1793070/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_OV.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0/genome.wustl.edu_OV.IlluminaHiSeq_DNASeq_automated.1.1.0.somatic.maf
bcgsc.ca_OV.IlluminaHiSeq_DNASeq.1.somatic.maf243:243Availableversion 2.4bcgsc.ca_OV.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-1656f2aab8ca1f4a6d2ebae1ba41b49a88/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_OV.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_OV.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_OV_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf458:466Availableversion 2.4broad.mit.edu_OV.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public31-MAY-1628936352780c44ed3909cbff417f1a5d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_OV_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

PAAD: Pancreatic adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf57:59Availableversion 2.4broad.mit.edu_PAAD.IlluminaGA_DNASeq.Level_2.0.3.0Public16-JUL-134eebfbb373ab492fd0ebe2f77e1c1b31/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq.1.somatic.maf147:146Availableversion 2.4bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0Public24-MAR-153ca7b56889b6d993e4866c6c994777fb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0/bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq.1.somatic.maf
hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq.1.somatic.maf147:146Availableversion 2.4hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public27-MAR-151b2cf21bb389a1f0c6baa30c611c41cc/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.1.0/hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq.1.protected.maf147:146Availableversion 2.4hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected27-MAR-15ac69f0c16e33c30b473661d2fc1eab54/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/paad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq.1.protected.maf
ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.2.0.somatic.maf172:177Availableversion 2.4ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public31-MAR-15a196b27aa2160903f768b4450f36b00b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.2.0/ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.2.0.somatic.maf
ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0.protected.maf174:179Availableversion 2.4ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0Protected31-MAR-15941606e665913c4d2f22f3647f443c7c/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/paad/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0/ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0.protected.maf
PAAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf185:189Availableversion 2.4broad.mit.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.10.0Public27-NOV-15f5c622fdf218713231a707c3a4e957b1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.10.0/PAAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf
freeze3.aggregated.capture.tcga.uuid.curated.somatic.maf150:150Availableversion 2.4broad.mit.edu_PAAD.IlluminaGA_DNASeq_curated.Level_2.1.7.0Public25-JAN-1637885947e777e844e0003f68fc777399/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq_curated.Level_2.1.7.0/freeze3.aggregated.capture.tcga.uuid.curated.somatic.maf
bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq.1.somatic.maf185:184Availableversion 2.4bcgsc.ca_PAAD.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public06-MAY-16cfcbbfe58340723b184ab56fb9073b48/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_PAAD.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq.1.somatic.maf

PCPG: Pheochromocytoma and Paraganglioma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_PCPG.IlluminaHiSeq_DNASeq.1.somatic.maf184:179Availableversion 2.4bcgsc.ca_PCPG.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public18-JUL-142262ca05f5923381bef0169b62f9b98a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/pcpg/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_PCPG.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_PCPG.IlluminaHiSeq_DNASeq.1.somatic.maf
hgsc.bcm.edu_PCPG.IlluminaGA_DNASeq.1.somatic.maf184:182Availableversion 2.4hgsc.bcm.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public23-JUL-14789cf45d8ca230b8cb7d3467c940399a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/pcpg/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_PCPG.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_PCPG.IlluminaGA_DNASeq.1.protected.maf15:14Availableversion 2.4hgsc.bcm.edu_PCPG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected23-JUL-147473b0497ef384f05db3b5a60da87308/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/pcpg/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_PCPG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_PCPG.IlluminaGA_DNASeq.1.protected.maf
ucsc.edu_PCPG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf184:182Availableversion 2.4ucsc.edu_PCPG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected25-JUL-1473766fc57ad9d7697ac73993721acffa/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/pcpg/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_PCPG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_PCPG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
ucsc.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf184:182Availableversion 2.4ucsc.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public25-JUL-14723258533b4b45d3008b1dfc74b73a5e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/pcpg/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
PCPG_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf184:182Availableversion 2.4broad.mit.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.3.0Public02-SEP-155a061b6ef12acbe9aaf2eb0f913593d2/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/pcpg/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.3.0/PCPG_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf
bcgsc.ca_PCPG.IlluminaHiSeq_DNASeq.1.somatic.maf184:179Availableversion 2.4bcgsc.ca_PCPG.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public03-MAY-16e40048aae75d77766bae29349351b346/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/pcpg/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_PCPG.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_PCPG.IlluminaHiSeq_DNASeq.1.somatic.maf

PRAD: Prostate adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_PRAD.IlluminaGA_DNASeq.1.somatic.maf263:259Availableversion 2.4hgsc.bcm.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public08-JAN-149008c2cca6ad337e712fcda47de6c47b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_PRAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_PRAD.IlluminaGA_DNASeq.1.protected.maf25:25Availableversion 2.4hgsc.bcm.edu_PRAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected08-JAN-14f11ebcffb1837b1028eb510292247ddd/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/prad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_PRAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_PRAD.IlluminaGA_DNASeq.1.protected.maf
PRAD_Capture_All_Pairs_QCPASS_v6_Nikki_Nov_25.aggregated.capture.tcga.uuid.curated.somatic.maf332:332Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_curated.Level_2.1.11.0Public28-OCT-15465fd94e7ba20c30c7d54823b33f016a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq_curated.Level_2.1.11.0/PRAD_Capture_All_Pairs_QCPASS_v6_Nikki_Nov_25.aggregated.capture.tcga.uuid.curated.somatic.maf
bcgsc.ca_PRAD.IlluminaHiSeq_DNASeq.1.somatic.maf499:498Availableversion 2.4bcgsc.ca_PRAD.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-16e51b1b5918cac62d8f397074bd827deb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_PRAD.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_PRAD.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_PRAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf503:546Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.7.0Public31-MAY-1665ffb3b7a4632d2b1ad9af4fdf910dc3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.7.0/gsc_PRAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

READ: Rectum adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.protected.maf1:1Availableversion 2.4hgsc.bcm.edu_READ.SOLiD_DNASeq_Cont.Level_2.1.7.0Protected30-JUL-13e3d33b9f24ca0c4bf1270750671b55dc/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq_cont/mutations_protected/hgsc.bcm.edu_READ.SOLiD_DNASeq_Cont.Level_2.1.7.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.protected.maf
hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf81:81Availableversion 2.4hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.6.0Public18-JUN-130728b040ad5dd2ea9668561716d12791/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.6.0/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.protected.maf64:64Availableversion 2.4hgsc.bcm.edu_READ.IlluminaGA_DNASeq_Cont.Level_2.1.6.0Protected18-JUN-13de3cdf2a6f200a31e606d3247db48ec7/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/read/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont/mutations_protected/hgsc.bcm.edu_READ.IlluminaGA_DNASeq_Cont.Level_2.1.6.0/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf35:35Availableversion 2.4hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.7.0Public30-JUL-1384d237db5eb2ec06134024f4d9284d60/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.7.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf
gsc_READ_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf157:161Availableversion 2.4broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public01-JUN-16b2fa03f499ad6e2a50bb2d34d28d55f4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_READ.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_READ_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

SARC: Sarcoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_SARC.IlluminaHiSeq_DNASeq.1.somatic.maf259:255Availableversion 2.4bcgsc.ca_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public03-FEB-1574a10d00d164b697fcd95a165dde8742/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_SARC.IlluminaHiSeq_DNASeq.1.somatic.maf
ucsc.edu_SARC.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf259:259Availableversion 2.4ucsc.edu_SARC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public12-FEB-15f68f9a2195a2f31e179ada4c8d54ae50/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_SARC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_SARC.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
ucsc.edu_SARC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf259:259Availableversion 2.4ucsc.edu_SARC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected12-FEB-15fadbf064776b4f3a2dcbd46f3c1b5c49/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/sarc/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_SARC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_SARC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.1.5.0.somatic.maf247:247Availableversion 2.4genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.5.0Public08-MAR-16f48a44abdbbd615585611f9fc30b43ba/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.5.0/genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.1.5.0.somatic.maf
bcgsc.ca_SARC.IlluminaHiSeq_DNASeq.1.somatic.maf259:255Availableversion 2.4bcgsc.ca_SARC.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-165fb37d9624a0e3190a18f4679ab7be77/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_SARC.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_SARC.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_SARC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf259:259Availableversion 2.4broad.mit.edu_SARC.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public01-JUN-166f9b0ae6355451bf33fd6312e0a7db95/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_SARC.IlluminaGA_DNASeq_automated.Level_2.1.1.0/gsc_SARC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

SKCM: Skin Cutaneous Melanoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
skcm_clean_pairs.aggregated.capture.tcga.uuid.somatic.maf346:345Availableversion 2.4broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.5.0Public13-OCT-13a2afad3719c3507170a718b0fa5138f9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.5.0/skcm_clean_pairs.aggregated.capture.tcga.uuid.somatic.maf
hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq.1.somatic.maf344:344Availableversion 2.4hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public17-APR-1438167b6da899ebd0bbf4d3cefbb4e378/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq_automated.Level_2.1.2.0/hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq.1.protected.maf57:57Availableversion 2.4hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0Protected17-APR-147f0ab688deb949a00b0ac8fe33749d54/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/skcm/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0/hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq.1.protected.maf
ucsc.edu_SKCM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf346:345Availableversion 2.4ucsc.edu_SKCM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected17-APR-14208d3eba0d446f23af97417f26773dba/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/skcm/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_SKCM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/ucsc.edu_SKCM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf
SKCM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf472:472Availableversion 2.4broad.mit.edu_SKCM.IlluminaGA_DNASeq_automated.Level_2.1.5.0Public05-JAN-1672c0514fb9e89f27ad363ae72a25708d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq_automated.Level_2.1.5.0/SKCM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

STAD: Stomach adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.somatic.maf279:315Availableversion 2.4broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.0.4.0Public15-JUL-1377fdad4d53619dc133d05e32d68aab65/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.0.4.0/PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.somatic.maf
QCv5_blacklist_Pass.aggregated.capture.tcga.uuid.curated.somatic.maf289:289Availableversion 2.4broad.mit.edu_STAD.IlluminaGA_DNASeq_curated.Level_2.1.3.0Public13-FEB-14ef02d98be7388051e5fe3a98e1520777/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq_curated.Level_2.1.3.0/QCv5_blacklist_Pass.aggregated.capture.tcga.uuid.curated.somatic.maf
hgsc.bcm.edu_STAD.IlluminaGA_DNASeq.1.protected.maf46:46Availableversion 2.4hgsc.bcm.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected15-APR-14f452d21d44d128f8e085f30d607e35cd/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/stad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_STAD.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_STAD.IlluminaGA_DNASeq.1.somatic.maf288:288Availableversion 2.4hgsc.bcm.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public15-APR-14fc0ac65f519e92d25841950e4154e867/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_STAD.IlluminaGA_DNASeq.1.somatic.maf
ucsc.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf289:327Availableversion 2.4ucsc.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected16-APR-148687678937e8209a6ca4a267818de1c4/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/stad/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
bcgsc.ca_STAD.IlluminaHiSeq_DNASeq.1.somatic.maf91:91Availableversion 2.4bcgsc.ca_STAD.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public25-NOV-14282c3436e4654a36e2f56b8951751eb4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_STAD.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_STAD.IlluminaHiSeq_DNASeq.1.somatic.maf
ucsc.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.2.0.0.protected.maf91:92Availableversion 2.4ucsc.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.2.0.0Protected03-DEC-14a032cdcaa284a7b33355df1b64f4d3dc/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/stad/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.2.0.0/ucsc.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.2.0.0.protected.maf
ucsc.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.2.0.0.somatic.maf91:92Availableversion 2.4ucsc.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.2.0.0Public03-DEC-14e0b8c01b20300157839334adca0984fb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.2.0.0/ucsc.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.2.0.0.somatic.maf
hgsc.bcm.edu_STAD.IlluminaGA_DNASeq.1.somatic.maf91:91Availableversion 2.4hgsc.bcm.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.2.0.0Public08-DEC-14ec8265c286db73650d1f8df5e5d8d8da/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.2.0.0/hgsc.bcm.edu_STAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_STAD.IlluminaGA_DNASeq.1.protected.maf91:91Availableversion 2.4hgsc.bcm.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.2.0.0Protected08-DEC-147caa90101c7352dcbadca688feb42843/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/stad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_STAD.IlluminaGA_DNASeq_Cont_automated.Level_2.2.0.0/hgsc.bcm.edu_STAD.IlluminaGA_DNASeq.1.protected.maf
genome.wustl.edu_STAD.IlluminaHiSeq_DNASeq_automated.1.3.0.somatic.maf395:395Availableversion 2.4genome.wustl.edu_STAD.IlluminaHiSeq_DNASeq_automated.Level_2.1.3.0Public24-SEP-158617daef2ca0a2380c0af7c50457e9a6/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_STAD.IlluminaHiSeq_DNASeq_automated.Level_2.1.3.0/genome.wustl.edu_STAD.IlluminaHiSeq_DNASeq_automated.1.3.0.somatic.maf
bcgsc.ca_STAD.IlluminaHiSeq_DNASeq.1.somatic.maf441:441Availableversion 2.4bcgsc.ca_STAD.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public02-MAY-16463feb5ae936f8c91999139805c412f9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_STAD.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_STAD.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_STAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf441:483Availableversion 2.4broad.mit.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.1.7.0Public26-MAY-161af33ee9816c500b03100ea00ac20d90/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.1.7.0/gsc_STAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

TGCT: Testicular Germ Cell Tumors

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_TGCT.IlluminaHiSeq_DNASeq.1.somatic.maf156:150Availableversion 2.4bcgsc.ca_TGCT.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public09-JAN-15a45ec319311f9fb577b67beb5bbeccd1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/tgct/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_TGCT.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_TGCT.IlluminaHiSeq_DNASeq.1.somatic.maf
ucsc.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf156:150Availableversion 2.4ucsc.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public20-JAN-1581c4b66488f2afc79e5aedb13cf434d3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/tgct/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
ucsc.edu_TGCT.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf156:150Availableversion 2.4ucsc.edu_TGCT.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected20-JAN-15190db4e99e4518e1d5d80174e9af540d/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/tgct/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_TGCT.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_TGCT.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq.1.somatic.maf156:150Availableversion 2.4hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public28-JAN-1587bd2fb1801dfd52deef6ce625eb7450/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/tgct/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq.1.protected.maf156:150Availableversion 2.4hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected28-JAN-15b61b8fd642440e3ddfa4c1d837c8383a/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/tgct/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq.1.somatic.maf155:149Availableversion 2.4hgsc.bcm.edu_TGCT.Mixed_DNASeq_curated.Level_2.1.0.0Public16-MAR-1519073e0848820c0becf005e3212828ca/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/tgct/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_TGCT.Mixed_DNASeq_curated.Level_2.1.0.0/hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq.1.protected.maf155:149Availableversion 2.4hgsc.bcm.edu_TGCT.Mixed_DNASeq_Cont_curated.Level_2.1.0.0Protected16-MAR-15950df1d9300e1d0f32c8f130d29c22e5/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/tgct/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_TGCT.Mixed_DNASeq_Cont_curated.Level_2.1.0.0/hgsc.bcm.edu_TGCT.IlluminaGA_DNASeq.1.protected.maf
bcgsc.ca_TGCT.IlluminaHiSeq_DNASeq.1.somatic.maf156:150Availableversion 2.4bcgsc.ca_TGCT.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public03-MAY-161ab9fdcec12ada892f654d6d140f94aa/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/tgct/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_TGCT.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_TGCT.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_TGCT_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf156:150Availableversion 2.4broad.mit.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public02-JUN-16d2345f25ddeb62608edc2d20e5694100/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/tgct/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.1.0/gsc_TGCT_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

THCA: Thyroid carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_THCA.IlluminaGA_DNASeq.1.protected.maf4:4Availableversion 2.4hgsc.bcm.edu_THCA.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected23-NOV-13f1b3c3d5e1349fd54312e89835fb1b1a/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/thca/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_THCA.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/hgsc.bcm.edu_THCA.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_THCA.IlluminaGA_DNASeq.1.somatic.maf406:403Availableversion 2.4hgsc.bcm.edu_THCA.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public23-NOV-1365ef1fc5a4a5066fdb8905f1855fdfad/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_THCA.IlluminaGA_DNASeq_automated.Level_2.1.1.0/hgsc.bcm.edu_THCA.IlluminaGA_DNASeq.1.somatic.maf
AN_TCGA_THCA_PAIR_Capture_ALLQC_14Aug2013_429.aggregated.capture.tcga.uuid.somatic.maf405:425Availableversion 2.4broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.5.0Public17-OCT-133edf75d78bed78876a12808ab710ca01/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.5.0/AN_TCGA_THCA_PAIR_Capture_ALLQC_14Aug2013_429.aggregated.capture.tcga.uuid.somatic.maf
bcgsc.ca_THCA.IlluminaHiSeq_DNASeq.1.somatic.maf435:430Availableversion 2.4bcgsc.ca_THCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public08-MAY-15db6ba364a5afdfb27dd3f07882f547f9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_THCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_THCA.IlluminaHiSeq_DNASeq.1.somatic.maf
THCA_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf504:526Availableversion 2.4broad.mit.edu_THCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public27-NOV-153670cab64ac5680cb3aae1b5bd14e470/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0/THCA_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf
bcgsc.ca_THCA.IlluminaHiSeq_DNASeq.1.somatic.maf504:496Availableversion 2.4bcgsc.ca_THCA.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public29-APR-1654aee145692d1fbf4bc33ad4d4f93b1c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_THCA.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_THCA.IlluminaHiSeq_DNASeq.1.somatic.maf

THYM: Thymoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_THYM.IlluminaHiSeq_DNASeq.1.somatic.maf123:123Availableversion 2.4bcgsc.ca_THYM.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public23-FEB-15d7fc6202aad1ed19d258ace0b3da0d89/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thym/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_THYM.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_THYM.IlluminaHiSeq_DNASeq.1.somatic.maf
ucsc.edu_THYM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf123:125Availableversion 2.4ucsc.edu_THYM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected04-MAR-15c070cf9772091204a088b76a4e61ed00/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/thym/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_THYM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_THYM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
hgsc.bcm.edu_THYM.IlluminaGA_DNASeq.1.somatic.maf121:123Availableversion 2.4hgsc.bcm.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public06-MAR-155dc47fb415d31d217ae52dd2ed15326d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thym/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_THYM.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_THYM.IlluminaGA_DNASeq.1.protected.maf121:123Availableversion 2.4hgsc.bcm.edu_THYM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected06-MAR-152185259ad2a639850f447027b7ebc185/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/thym/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_THYM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_THYM.IlluminaGA_DNASeq.1.protected.maf
ucsc.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf123:125Availableversion 2.4ucsc.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public04-MAR-156a38ec279351197da08ce5ce5b3d22cd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thym/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
genome.wustl.edu_THYM.IlluminaGA_DNASeq_curated.Level_2.1.1.0.somatic.maf123:123Availableversion 2.4genome.wustl.edu_THYM.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0Public14-JAN-16f5172b67ae045ee0171598faf4bd8dd7/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thym/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_THYM.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0/genome.wustl.edu_THYM.IlluminaGA_DNASeq_curated.Level_2.1.1.0.somatic.maf
bcgsc.ca_THYM.IlluminaHiSeq_DNASeq.1.somatic.maf123:123Availableversion 2.4bcgsc.ca_THYM.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public03-MAY-16de0f9ec34a7aef3be07d555964556b23/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thym/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_THYM.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_THYM.IlluminaHiSeq_DNASeq.1.somatic.maf
gsc_THYM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf123:125Availableversion 2.4broad.mit.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public31-MAY-16f9383f45f30189406dc307c0f9e3c79b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thym/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.1.0/gsc_THYM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

UCEC: Uterine Corpus Endometrial Carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
step4_An_UCEC_194.aggregated.tcga.maf2.4.migrated.somatic.maf194:194Availableversion 2.3broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.100.1.0Public27-JUN-1318c2b658dd2a76509bac679bef0b45fd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.100.1.0/step4_An_UCEC_194.aggregated.tcga.maf2.4.migrated.somatic.maf
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.7.somatic.maf248:248Availableversion 2.4genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.7.0Public02-JUL-13dd28fc297e773dd72d23ef5d9385e117/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.7.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.7.somatic.maf
genome.wustl.edu_UCEC.IlluminaHiSeq_DNASeq_automated.1.8.0.somatic.maf248:248Availableversion 2.4genome.wustl.edu_UCEC.IlluminaHiSeq_DNASeq_automated.Level_2.1.8.0Public14-DEC-15dd28fc297e773dd72d23ef5d9385e117/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_UCEC.IlluminaHiSeq_DNASeq_automated.Level_2.1.8.0/genome.wustl.edu_UCEC.IlluminaHiSeq_DNASeq_automated.1.8.0.somatic.maf
gsc_UCEC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf545:557Availableversion 2.4broad.mit.edu_UCEC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public02-JUN-16d592eaaf895caa9f1c3eb637aaecdcf3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_UCEC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/gsc_UCEC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

UCS: Uterine Carcinosarcoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
ucsc.edu_UCS.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf57:57Availableversion 2.4ucsc.edu_UCS.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected16-MAR-148fdeeac52d7b54d2db26a01c5c760baa/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/ucs/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_UCS.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_UCS.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
hgsc.bcm.edu_UCS.IlluminaGA_DNASeq.1.somatic.maf57:57Availableversion 2.4hgsc.bcm.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public24-MAR-14bfcabd0f2617d4bf04e3fbf7679588d5/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_UCS.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_UCS.IlluminaGA_DNASeq.1.protected.maf2:2Availableversion 2.4hgsc.bcm.edu_UCS.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected24-MAR-145c494749f08dcc6bc613ecf62e64c5fe/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/ucs/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_UCS.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_UCS.IlluminaGA_DNASeq.1.protected.maf
bcgsc.ca_UCS.IlluminaHiSeq_DNASeq.1.somatic.maf57:57Availableversion 2.4bcgsc.ca_UCS.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public07-MAY-15acfa7cca16cd17f734296cd4dabf9692/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_UCS.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_UCS.IlluminaHiSeq_DNASeq.1.somatic.maf
UCS_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf57:57Availableversion 2.4broad.mit.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.3.0Public02-SEP-1514ac95d16b58bc3a6fd95ad9716566d2/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.3.0/UCS_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_UCS_PAIR_Capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf57:57Availableversion 2.4broad.mit.edu_UCS.IlluminaGA_DNASeq_curated.Level_2.1.12.0Public27-JAN-16920602d11712f8fe1ea921e937a491f7/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_UCS.IlluminaGA_DNASeq_curated.Level_2.1.12.0/PR_TCGA_UCS_PAIR_Capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf
bcgsc.ca_UCS.IlluminaHiSeq_DNASeq.1.somatic.maf57:57Availableversion 2.4bcgsc.ca_UCS.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public29-APR-16f55c5ad150e084d59a6bf57a136708a2/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_UCS.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_UCS.IlluminaHiSeq_DNASeq.1.somatic.maf

UVM: Uveal Melanoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
bcgsc.ca_UVM.IlluminaHiSeq_DNASeq.1.somatic.maf80:80Availableversion 2.4bcgsc.ca_UVM.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public24-OCT-14ce79aa8309017d349f7a5e73de16e181/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/uvm/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_UVM.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_UVM.IlluminaHiSeq_DNASeq.1.somatic.maf
hgsc.bcm.edu_UVM.IlluminaGA_DNASeq.1.somatic.maf80:80Availableversion 2.4hgsc.bcm.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public28-OCT-141eadf49ad95d9dda23b954d17ff6096f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/uvm/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_UVM.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_UVM.IlluminaGA_DNASeq.1.protected.maf80:80Availableversion 2.4hgsc.bcm.edu_UVM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected28-OCT-149af975d73c924e0fa1ec8d7c9a27da9c/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/uvm/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_UVM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_UVM.IlluminaGA_DNASeq.1.protected.maf
ucsc.edu_UVM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf80:80Availableversion 2.4ucsc.edu_UVM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected28-OCT-14a243a86714b0110f727d37037782cc71/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/uvm/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_UVM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_UVM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
ucsc.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf80:80Availableversion 2.4ucsc.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public28-OCT-1454d9e9cd74115f0d0f01b1346b830075/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/uvm/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
UVM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf80:80Availableversion 2.4broad.mit.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public01-SEP-15607ba3026a9682abbbf8930f6156f895/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/uvm/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.2.0/UVM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_UVM_PAIR_Capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf80:80Availableversion 2.4broad.mit.edu_UVM.IlluminaGA_DNASeq_curated.Level_2.1.0.0Public06-OCT-15395723d5b8946a5f7a0d43df746ba099/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/uvm/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_UVM.IlluminaGA_DNASeq_curated.Level_2.1.0.0/PR_TCGA_UVM_PAIR_Capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf
bcgsc.ca_UVM.IlluminaHiSeq_DNASeq.1.somatic.maf80:80Availableversion 2.4bcgsc.ca_UVM.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public29-APR-16e88a521b9ef44f01ebc08b0750c308ec/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/uvm/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_UVM.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_UVM.IlluminaHiSeq_DNASeq.1.somatic.maf

Obsolete MAF Files

ACC: Adrenocortical carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf91:91Availableversion 2.4hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public04-MAR-140151e811859eaa7eda85f504ffe91dc9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_automated.Level_2.1.1.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf47:47Availableversion 2.4hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected04-MAR-14b53f8b4b7e74f4aac4101371641edf47/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/acc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf91:91Availableversion 2.4hgsc.bcm.edu_ACC.Mixed_DNASeq_Cont_curated.Level_2.1.0.0Protected04-APR-143f7ae765b3c9753598653b23070bdc6f/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/acc/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_ACC.Mixed_DNASeq_Cont_curated.Level_2.1.0.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf91:91Availableversion 2.4hgsc.bcm.edu_ACC.Mixed_DNASeq_curated.Level_2.1.0.0Public04-APR-14fa33dd00f30978fd2267d6c308ee4648/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_ACC.Mixed_DNASeq_curated.Level_2.1.0.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf91:91Availableversion 2.4hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public14-AUG-153427ada0f81dc5044aefd3e0fa0e7d50/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/acc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_automated.Level_2.1.2.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf91:91Availableversion 2.4hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0Protected14-AUG-157cb4113716b2cfbeedc0d95991816309/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/acc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0/hgsc.bcm.edu_ACC.IlluminaGA_DNASeq.1.protected.maf

BLCA: Bladder Urothelial Carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_BLCA_Capture.final_analysis.clean.maf29:29Availableversion 2.2 broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.0.0.0Public24-JAN-1274f58c60a37a6e3e650856a8d4efb6fe/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.0.0.0/PR_TCGA_BLCA_Capture.final_analysis.clean.maf
BLCA-28-original.aggregated.tcga.somatic.mafn/aAvailableN/Abroad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.1.1.0Public03-APR-124e7e1937c08ab059b50df193b76ec412/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.1.1.0/BLCA-28-original.aggregated.tcga.somatic.maf
BLCA-28-original.aggregated.tcga.somatic.maf28:28Availableversion 2.3broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.1.2.0Public08-AUG-12037abbe04ba7ac03a7257cbdd82f8fa0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.1.2.0/BLCA-28-original.aggregated.tcga.somatic.maf
PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf99:105Availableversion 2.3broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.0.1.0Public06-DEC-1233db98ae39111f8cb5b4b115165356a3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf136:145Availableversion 2.3broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.0.2.0Public27-MAR-13dd846e7240ff5ba72397412fff3b3f3c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf159:167DCCT-1275version 2.4broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.0.3.0Public15-JUL-13d3eb70b940fbec38a934bb6d41a1fb95/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
BLCA130_somatic_updated.aggregated.capture.tcga.uuid.curated.somatic.maf130:130Availableversion 2.4broad.mit.edu_BLCA.IlluminaGA_DNASeq_curated.Level_2.1.3.0Public14-FEB-14bc25a3db8faa9064d7155f74362d34e8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq_curated.Level_2.1.3.0/BLCA130_somatic_updated.aggregated.capture.tcga.uuid.curated.somatic.maf
PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS_v5.aggregated.capture.tcga.uuid.automated.somatic.maf238:253Availableversion 2.4broad.mit.edu_BLCA.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public22-MAR-146ca44d26f09c9800e0cb5242cfea29fd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq_automated.Level_2.1.4.0/PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS_v5.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS_v6.aggregated.capture.tcga.uuid.automated.somatic.maf396:411Availableversion 2.4broad.mit.edu_BLCA.IlluminaGA_DNASeq_automated.Level_2.1.5.0Public31-MAR-1505d8985686dd2f6cde0c9bfdb31a9265/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/blca/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_BLCA.IlluminaGA_DNASeq_automated.Level_2.1.5.0/PR_TCGA_BLCA_PAIR_Capture_All_Pairs_QCPASS_v6.aggregated.capture.tcga.uuid.automated.somatic.maf

BRCA: Breast invasive carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.0.0.maf107:109Availableversion 2.2genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.0.0Public22-JUL-11e327dee92aa9b78c23ec08322c3ed9e8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.0.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.0.0.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.somatic.mafn/aAvailableN/Agenome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.0.0Public21-SEP-110f39884e6b6283236bb1006bceedbb5a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.0.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.somatic.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.1.0.somatic.mafn/aAvailableN/Agenome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.1.0Public01-NOV-11d7f085c42f5d0ff1577cfdc878a7e0ea/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.1.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.1.0.somatic.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.2.0.somatic.maf510:546Availableversion 2.3genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.2.0Public03-AUG-1211741e0ccca4f72d568efc123543e01f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.2.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.2.0.somatic.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.1.0.somatic.maf776:801Availableversion 2.3genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.1.0Public08-AUG-12f4fc902af48f4ea67323da5d727a0020/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.1.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.1.0.somatic.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.0.0.maf107:109DCCT-1275version 2.3genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.1.0Public09-OCT-121d662b8319e3a2672db293b15252ed4f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.1.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.0.0.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.1.0.somatic.maf776:801Availableversion 2.3genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.2.0Public09-OCT-12ffa233efe6085306bff0ffdef0d0736e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.2.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.5.1.0.somatic.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.2.0.somatic.maf510:546DCCT-1275version 2.3genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.3.0Public11-OCT-12dbc316c2f817dfc4284df434a5d152c8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.3.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.3.2.0.somatic.maf
genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.1.0.0.curated.somatic.maf993:1032Availableversion 2.4genome.wustl.edu_BRCA.IlluminaGA_DNASeq_curated.Level_2.1.0.0Public02-JAN-1450efc8d8bc768b79f62250f677f87025/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminaga_dnaseq_curated/mutations/genome.wustl.edu_BRCA.IlluminaGA_DNASeq_curated.Level_2.1.0.0/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.1.0.0.curated.somatic.maf
genome.wustl.edu_BRCA.IlluminaHiSeq_DNASeq_automated.1.0.0.somatic.maf776:801Availableversion 2.4genome.wustl.edu_BRCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public16-DEC-155d6283c8e28f9c1e2ddaa55f4b773b88/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/brca/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_BRCA.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/genome.wustl.edu_BRCA.IlluminaHiSeq_DNASeq_automated.1.0.0.somatic.maf

CESC: Cervical squamous cell carcinoma and endocervical adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
An_TCGA_CESC_Capture_36.aggregated.tcga.somatic.mafn/aAvailableN/Abroad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.0.0Public05-MAR-127fc317caada0491cd9e80bbb6400dd05/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.0.0/An_TCGA_CESC_Capture_36.aggregated.tcga.somatic.maf
An_TCGA_CESC_Capture_36.aggregated.tcga.somatic.maf36:36Availableversion 2.3broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.1.0Public08-AUG-12a5f7545b050268fcdf7683e8f26d59b0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.1.0/An_TCGA_CESC_Capture_36.aggregated.tcga.somatic.maf
An_TCGA_CESC_Capture_36.aggregated.tcga.somatic.maf36:36Availableversion 2.3broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.2.0Public19-OCT-122261747c2d8fd56944183070a4013287/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.2.0/An_TCGA_CESC_Capture_36.aggregated.tcga.somatic.maf
An_TCGA_CESC_Capture_36.aggregated.tcga.somatic.maf36:36Availableversion 2.3broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.3.0Public05-NOV-122261747c2d8fd56944183070a4013287/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.1.3.0/An_TCGA_CESC_Capture_36.aggregated.tcga.somatic.maf
PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf39:39Availableversion 2.3broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.0.1.0Public28-NOV-1250394d9bca4872e07a9dc10bb2221cbb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf40:40Availableversion 2.3broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.0.2.0Public27-MAR-130422e7b9be78aa6d7a649f11090f120c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf40:40Availableversion 2.4broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.0.3.0Public18-JUN-13d17c019bd91ec7083c2b678eac3efb0f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf40:40DCCT-1275version 2.4broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.0.5.0Public16-JUL-13522bd0522b1ee4df5f1f1e2871d4fe9b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq.Level_2.0.5.0/PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf40:40Availableversion 2.4broad.mit.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.6.0Public22-MAR-1413219ca8faa4aaf3568576ac30c563ea/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.6.0/PR_TCGA_CESC_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf
ucsc.edu_CESC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf199:201Availableversion 2.4ucsc.edu_CESC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected24-JUN-147c0ef256834171525a7521bd27934138/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/cesc/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_CESC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_CESC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
ucsc.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.mafn/aTCGA-2249N/Aucsc.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public24-JUN-144f225903ad3e51a9fc95f72866cc10ab/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_CESC.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
genome.wustl.edu_CESC.IlluminaHiSeq_DNASeq_automated.1.2.0.somatic.maf192:192Availableversion 2.4genome.wustl.edu_CESC.IlluminaHiSeq_DNASeq_automated.Level_2.1.2.0Public04-DEC-15fb85383e5f2a8beec23515a704621a5d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/cesc/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_CESC.IlluminaHiSeq_DNASeq_automated.Level_2.1.2.0/genome.wustl.edu_CESC.IlluminaHiSeq_DNASeq_automated.1.2.0.somatic.maf

CHOL: Cholangiocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
CHOL_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf36:49Availableversion 2.4broad.mit.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public19-DEC-140aa2864fc08b6a12a164b77d49765e59/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/chol/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_CHOL.IlluminaGA_DNASeq_automated.Level_2.1.0.0/CHOL_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

COAD: Colon adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.mafn/aAvailableN/Ahgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.0.0Public17-NOV-119a10dd53bf0b131ad8437d6da12fadb0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.0.0/hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.mafn/aAvailableN/Ahgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.0.0Public17-NOV-1187a05ded55c014d5cff81ed4cb89717f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.0.0/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf53:53Availableversion 2.3hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.1.0Public08-AUG-12c0106d6f96585617f95e8cdd61cd794d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.1.0/hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf102:102Availableversion 2.3hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.1.0Public08-AUG-12595f4c124cd24df5c91a1a0325ec4738/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.1.0/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf214:214Availableversion 2.3hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.3.0Public09-JAN-13c0333eebd4fadea249acdd7334b3fb63/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.3.0/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf214:214Availableversion 2.3hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.2.0Public09-OCT-12c0333eebd4fadea249acdd7334b3fb63/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.2.0/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf53:53Availableversion 2.3hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.2.0Public10-OCT-1235d3d4fcc399b0ef97cd76dd564e09c0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.2.0/hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf53:53Availableversion 2.3hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.3.0Public09-JAN-1335d3d4fcc399b0ef97cd76dd564e09c0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.3.0/hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf53:53Availableversion 2.3hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.4.0Public14-MAR-137e97bc803951045576ff8c5479d84be4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.4.0/hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf53:53Availableversion 2.3hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.5.0Public25-MAR-137e97bc803951045576ff8c5479d84be4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.5.0/hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf220:221Availableversion 2.3hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.4.0Public18-APR-13adb65259de592b979d9134dcceb6a8bd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.Level_2.1.4.0/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.protected.maf182:182Availableversion 2.3hgsc.bcm.edu_COAD.IlluminaGA_DNASeq_Cont.Level_2.1.4.0Protected18-APR-1324accf5b0e048cc9872ce2c04b064cca/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/coad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont/mutations_protected/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq_Cont.Level_2.1.4.0/hgsc.bcm.edu_COAD.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf53:53Availableversion 2.4hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.6.0Public18-JUN-138ed409b9a55317061cad346338663023/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/coad/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_COAD.SOLiD_DNASeq.Level_2.1.6.0/hgsc.bcm.edu_COAD.SOLiD_DNASeq.1.somatic.maf

DLBC: Lymphoid Neoplasm Diffuse Large B-cell Lymphoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq.1.somatic.maf48:48Availableversion 2.4hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public11-AUG-159e4e7a1b2c19ff80f2c47e39ea721250/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/dlbc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq.1.protected.maf48:48Availableversion 2.4hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected11-AUG-1592b0940a26ac27dfc370009cf1aaac3d/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/dlbc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_DLBC.IlluminaGA_DNASeq.1.protected.maf
bcgsc.ca_DLBC.IlluminaHiSeq_DNASeq.1.somatic.mafn/aDCCT-1519N/Abcgsc.ca_DLBC.Multicenter_mutation_calling_MC3.Level_2.1.0.0Public29-APR-161058958ef5a346cccf863bbf2e5f679a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/dlbc/gsc/bcgsc.ca/multicenter_mutation_calling_mc3/mutations/bcgsc.ca_DLBC.Multicenter_mutation_calling_MC3.Level_2.1.0.0/bcgsc.ca_DLBC.IlluminaHiSeq_DNASeq.1.somatic.maf

ESCA: Esophageal carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
An_TCGA_ESCA_External_capture_All_Pairs.aggregated.capture.tcga.uuid.automated.somatic.maf184:189Availableversion 2.4broad.mit.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public05-DEC-141f3d13d650025279156e35e472c7e4a9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/esca/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_ESCA.IlluminaGA_DNASeq_automated.Level_2.1.0.0/An_TCGA_ESCA_External_capture_All_Pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

GBM: Glioblastoma multiforme

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.2.0Protected19-NOV-07Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.2.0/broad.mit.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.2.0Protected21-NOV-07Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.2.0/hgsc.bcm.edu_GBM.ABI.2.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.3.0Protected26-NOV-07Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.3.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.4.0Protected08-JAN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.4.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.0.0Protected04-FEB-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.0.0/genome.wustl.edu_GBM.ABI.53.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.6.0Protected14-FEB-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.6.0/hgsc.bcm.edu_GBM.ABI.2.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.5.0Protected15-FEB-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.5.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.1.0Protected21-FEB-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.1.0/genome.wustl.edu_GBM.ABI.53.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.7.0Protected21-FEB-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.7.0/hgsc.bcm.edu_GBM.ABI.2.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.6.0Protected26-FEB-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.6.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.7.0Protected27-FEB-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.7.0/broad.mit.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.8.0Protected28-FEB-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.8.0/hgsc.bcm.edu_GBM.ABI.2.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.9.0Protected03-MAR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.9.0/hgsc.bcm.edu_GBM.ABI.2.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.8.0Protected07-MAR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.8.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.2.0Protected08-MAR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.2.0/genome.wustl.edu_GBM.ABI.53.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.10.0Protected10-MAR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.10.0/hgsc.bcm.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.2.0.0Protected10-MAR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.2.0.0/hgsc.bcm.edu_GBM.ABI.2.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.9.0Protected10-MAR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.9.0/broad.mit.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.13.0Protected13-MAR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.13.0/hgsc.bcm.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.2.3.0Protected13-MAR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.2.3.0/hgsc.bcm.edu_GBM.ABI.2.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.10.0Protected16-APR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.10.0/broad.mit.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.2.4.0Protected22-APR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.2.4.0/hgsc.bcm.edu_GBM.ABI.2.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.14.0Protected22-APR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.14.0/hgsc.bcm.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.11.0Protected23-APR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.11.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.3.0Protected29-APR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.3.0/genome.wustl.edu_GBM.ABI.53.maf
genome.wustl.edu_GBM.ABI.53.4.0.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.4.0Protected29-APR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.4.0/genome.wustl.edu_GBM.ABI.53.4.0.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.15.0Protected30-APR-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.15.0/hgsc.bcm.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.12.0Protected01-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.12.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.13.0Protected01-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.13.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.14.0Protected07-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.14.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.5.0Protected07-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.5.0/genome.wustl.edu_GBM.ABI.53.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.2.5.0Protected09-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.2.5.0/hgsc.bcm.edu_GBM.ABI.2.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.16.0Protected09-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.16.0/hgsc.bcm.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.15.0Protected16-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.15.0/broad.mit.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.2.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.2.6.0Protected19-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.2.6.0/hgsc.bcm.edu_GBM.ABI.2.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.17.0Protected19-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.17.0/hgsc.bcm.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.18.0Protected20-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.18.0/hgsc.bcm.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.16.0Protected28-MAY-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.16.0/broad.mit.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.2.somatic.maf83:75Availableunknownhgsc.bcm.edu_GBM.ABI.2.7.0Public02-JUN-08893e4b91fefb227b9c26a25a69d57bae/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.2.7.0/hgsc.bcm.edu_GBM.ABI.2.somatic.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.6.0Protected02-JUN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.6.0/genome.wustl.edu_GBM.ABI.53.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.19.0Protected02-JUN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.19.0/hgsc.bcm.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.17.0Protected04-JUN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.17.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.7.0Protected04-JUN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.7.0/genome.wustl.edu_GBM.ABI.53.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.18.0Protected11-JUN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.18.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.19.0Protected18-JUN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.19.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.8.0Protected19-JUN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.8.0/genome.wustl.edu_GBM.ABI.53.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.20.0Protected25-JUN-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.20.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.21.0Protected02-JUL-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.21.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.22.0Protected09-JUL-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.22.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.23.0Protected16-JUL-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.23.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.24.0Protected19-JUL-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.24.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.25.0Protected13-AUG-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.25.0/broad.mit.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.26.0Protected15-AUG-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.26.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.9.0Protected15-AUG-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.9.0/genome.wustl.edu_GBM.ABI.53.maf
genome.wustl.edu_GBM.ABI.319.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.319.0.0Protected08-SEP-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.319.0.0/genome.wustl.edu_GBM.ABI.319.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.27.0Protected10-SEP-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.27.0/broad.mit.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.20.0Protected02-OCT-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.20.0/hgsc.bcm.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.28.0Protected22-OCT-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.28.0/broad.mit.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.10.0Protected01-NOV-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.10.0/genome.wustl.edu_GBM.ABI.53.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.29.0Protected04-NOV-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.29.0/broad.mit.edu_GBM.ABI.1.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.23.0Protected13-NOV-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.23.0/hgsc.bcm.edu_GBM.ABI.1.maf
genome.wustl.edu_GBM.ABI.53.mafn/aObsoleteN/Agenome.wustl.edu_GBM.ABI.53.11.0Protected21-NOV-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/genome.wustl.edu/abi/tracerel/genome.wustl.edu_GBM.ABI.53.11.0/genome.wustl.edu_GBM.ABI.53.maf
hgsc.bcm.edu_GBM.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_GBM.ABI.1.26.0Protected08-DEC-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_GBM.ABI.1.26.0/hgsc.bcm.edu_GBM.ABI.1.maf
broad.mit.edu_GBM.ABI.1.mafn/aObsoleteN/Abroad.mit.edu_GBM.ABI.1.31.0Protected27-APR-09Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_GBM.ABI.1.31.0/broad.mit.edu_GBM.ABI.1.maf
gbm_liftover.aggregated.capture.tcga.uuid.somatic.maf291:291DCCT-1275version 2.3broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.1.0Public27-FEB-131ee5e9b937ef29b1b3ccc0f6b454f886/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.1.0/gbm_liftover.aggregated.capture.tcga.uuid.somatic.maf
step4_gbm_liftover.aggregated.capture.tcga.uuid.maf2.4.migrated.somatic.maf291:291Availableversion 2.3broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.100.0.0Public21-JUN-13e5c7d5161d0793b85cd7cfeeb2ad8221/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.100.0.0/step4_gbm_liftover.aggregated.capture.tcga.uuid.maf2.4.migrated.somatic.maf
ucsc.edu_GBM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf290:290Availableversion 2.4ucsc.edu_GBM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected01-MAY-15cb07114e95008157da5b20692b825232/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/gbm/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_GBM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_GBM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
ucsc.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf289:289Availableversion 2.4ucsc.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public01-MAY-15ed7a734db3e5225a6a0f7478f0181c10/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/gbm/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf

HNSC: Head and Neck squamous cell carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_HNSC_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf277:333Availableversion 2.3broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.0.1.0Public06-DEC-12ab75a4c83424ee02e19befa5e1cd6448/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_HNSC_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_HNSC_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf319:378DCCT-1275version 2.3broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.0.2.0Public27-MAR-137ae6bcc40efa81b40c355b2e70add124/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_HNSC_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_HNSC_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf509:567Availableversion 2.4broad.mit.edu_HNSC.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public26-MAR-14f84d00b8905b900143125f10c587a11a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_HNSC.IlluminaGA_DNASeq_automated.Level_2.1.4.0/PR_TCGA_HNSC_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf
pair_set_279_freeze_Mar262013.aggregated.capture.tcga.uuid.curated.somatic.maf279:279Availableversion 2.4broad.mit.edu_HNSC.IlluminaGA_DNASeq_curated.Level_2.1.5.0Public09-JAN-152f88489506d6a2c68cace24046e30bd1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/hnsc/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_HNSC.IlluminaGA_DNASeq_curated.Level_2.1.5.0/pair_set_279_freeze_Mar262013.aggregated.capture.tcga.uuid.curated.somatic.maf

KICH: Kidney Chromophobe

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf65:65Availableversion 2.3hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.Level_2.1.0.0Public15-MAR-13591c5b7e699ea7761daa932e409ebda3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.Level_2.1.0.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf65:65Availableversion 2.3hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.Level_2.1.1.0Public23-APR-13591c5b7e699ea7761daa932e409ebda3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.Level_2.1.1.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf30:30Availableversion 2.3hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont.Level_2.1.0.0Protected20-MAR-1339f652bc91426bad169552c4964c89fc/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont/mutations_protected/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont.Level_2.1.0.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf65:65Availableversion 2.3hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont.Level_2.1.1.0Protected23-APR-13b53c3c8fba79e488acce541c3c1479f9/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont/mutations_protected/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont.Level_2.1.1.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf65:65TCGA-2678 replacedversion 2.4hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.Level_2.1.2.0Public18-JUN-135e2bd17e7e52ecbc1c900328009287a0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.Level_2.1.2.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf65:65TCGA-2678 replacedversion 2.4hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont.Level_2.1.2.0Protected18-JUN-138676202e1b64721c8d09463510bcc66e/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont/mutations_protected/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont.Level_2.1.2.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf64:64Availableversion 2.4hgsc.bcm.edu_KICH.Mixed_DNASeq_Cont_curated.Level_2.1.0.0Protected15-NOV-13128858f2aad2376a1e69c29ceb742ae1/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kich/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_KICH.Mixed_DNASeq_Cont_curated.Level_2.1.0.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf66:66Availableversion 2.4hgsc.bcm.edu_KICH.Mixed_DNASeq_curated.Level_2.1.0.0Public15-NOV-134283d127c8c3fcd2057de4f2b884820f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_KICH.Mixed_DNASeq_curated.Level_2.1.0.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf66:66Availableversion 2.4hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_automated.Level_2.1.3.0Public11-AUG-158d5776ebdd859855ed5123edd7a8f5ba/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_automated.Level_2.1.3.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf66:66Availableversion 2.4hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont_automated.Level_2.1.3.0Protected11-AUG-15527bb53c0b5ebd4cade3f036d5b22e23/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kich/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq_Cont_automated.Level_2.1.3.0/hgsc.bcm.edu_KICH.IlluminaGA_DNASeq.1.protected.maf

KIRC: Kidney renal clear cell carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
An_KIRC_Freeze_1.4_Broad_184_Capture.release.cleaned.mafn/aAvailableN/Abroad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.0.0Public20-JAN-125fffb3773e26e658787c1681183e1497/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.0.0/An_KIRC_Freeze_1.4_Broad_184_Capture.release.cleaned.maf
An_KIRC_Freeze_1.4_Broad_184_Capture.release.cleaned.maf185:185Availableversion 2.2 broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.1.0Public30-JAN-1256efcf7242b5cf80dfc54a0e450c48a8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.1.0/An_KIRC_Freeze_1.4_Broad_184_Capture.release.cleaned.maf
BI_and_BCM_1.4.aggregated.tcga.somatic.mafn/aAvailableN/Abroad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.1.0Public05-APR-1264186113a217758fc6622f8b83232d33/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.1.0/BI_and_BCM_1.4.aggregated.tcga.somatic.maf
BI_and_BCM_1.4.aggregated.tcga.somatic.maf297:297Availableversion 2.3broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.2.0Public08-AUG-120ee5cb7003aec265f525902863266d9b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.2.0/BI_and_BCM_1.4.aggregated.tcga.somatic.maf
BI_and_BCM_1.4.aggregated.tcga.somatic.maf297:297Availableversion 2.3broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.3.0Public19-OCT-121c0e0542c7c7ff010496982104370101/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.3.0/BI_and_BCM_1.4.aggregated.tcga.somatic.maf
BI_and_BCM_1.4.aggregated.tcga.somatic.maf297:297Availableversion 2.3broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.4.0Public05-NOV-121c0e0542c7c7ff010496982104370101/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.4.0/BI_and_BCM_1.4.aggregated.tcga.somatic.maf
BI_and_BCM_1.4.aggregated.tcga.somatic.maf297:297QUAL-408version 2.3broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.5.0Public15-JUL-131c0e0542c7c7ff010496982104370101/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.1.5.0/BI_and_BCM_1.4.aggregated.tcga.somatic.maf
PR_TCGA_KIRC_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf234:233Availableversion 2.3broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.3.0Public06-DEC-1219253be66260fbd0b4578cf479470cca/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_KIRC_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
hgsc.bcm.edu_KIRC.Mixed_DNASeq.1.protected.maf419:419Availableversion 2.4hgsc.bcm.edu_KIRC.Mixed_DNASeq_Cont.Level_2.1.1.0Protected18-JUN-1378bcaf41978b973caff6ce5840217433/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirc/gsc/hgsc.bcm.edu/mixed_dnaseq_cont/mutations_protected/hgsc.bcm.edu_KIRC.Mixed_DNASeq_Cont.Level_2.1.1.0/hgsc.bcm.edu_KIRC.Mixed_DNASeq.1.protected.maf
hgsc.bcm.edu_KIRC.Mixed_DNASeq.1.somatic.maf491:490Availableversion 2.4hgsc.bcm.edu_KIRC.Mixed_DNASeq.Level_2.1.1.0Public18-JUN-1359a2c6e62d405f2ec7115f87b71bbd34/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/hgsc.bcm.edu/mixed_dnaseq/mutations/hgsc.bcm.edu_KIRC.Mixed_DNASeq.Level_2.1.1.0/hgsc.bcm.edu_KIRC.Mixed_DNASeq.1.somatic.maf
An_KIRC_Freeze_1.4_Broad_184_Capture.release.cleaned.maf184:184Availableversion 2.3broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.2.0Public23-OCT-12365acde3b63d339820ad3fcd8fe7a35e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.2.0/An_KIRC_Freeze_1.4_Broad_184_Capture.release.cleaned.maf
PR_TCGA_KIRC_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf238:236DCCT-1275version 2.4broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.4.0Public16-JUL-1364172ca8fc9863e46a266f34cdba3aeb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.0.4.0/PR_TCGA_KIRC_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_KIRC_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.automated.somatic.maf235:235Availableversion 2.4broad.mit.edu_KIRC.IlluminaGA_DNASeq_automated.Level_2.1.5.0Public15-APR-14d0f4703a282f6ea41fcdfef355ba12aa/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_KIRC.IlluminaGA_DNASeq_automated.Level_2.1.5.0/PR_TCGA_KIRC_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.automated.somatic.maf

KIRP: Kidney renal papillary cell carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_KIRP_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf103:109Availableversion 2.3broad.mit.edu_KIRP.IlluminaGA_DNASeq.Level_2.0.1.0Public06-DEC-12ba09cc530e3bccfd54941d96339b6914/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRP.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_KIRP_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_KIRP_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf114:123Availableversion 2.3broad.mit.edu_KIRP.IlluminaGA_DNASeq.Level_2.0.2.0Public27-MAR-1319396348250b426192fb40936e383135/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_KIRP.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_KIRP_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
ucsc.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf171:190Availableversion 2.4ucsc.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected21-FEB-1426b8d3ffa3d61e628b4c00fc2a0cd260/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirp/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/ucsc.edu_KIRP.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf
PR_TCGA_KIRP_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf116:126Availableversion 2.4broad.mit.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public26-MAR-1450c2ed1b01a086b00715ba11ebcfadeb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_KIRP.IlluminaGA_DNASeq_automated.Level_2.1.4.0/PR_TCGA_KIRP_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf168:168Availableversion 2.4hgsc.bcm.edu_KIRP.Mixed_DNASeq_Cont_curated.Level_2.1.0.0Protected15-APR-149ca016989f99d08353b7805453fb6038/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirp/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_KIRP.Mixed_DNASeq_Cont_curated.Level_2.1.0.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf168:168Availableversion 2.4hgsc.bcm.edu_KIRP.Mixed_DNASeq_curated.Level_2.1.0.0Public15-APR-140b79fec69458a4924081737503071512/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_KIRP.Mixed_DNASeq_curated.Level_2.1.0.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf132:132Availableversion 2.4hgsc.bcm.edu_KIRP.Mixed_DNASeq_Cont_curated.Level_2.1.1.0Protected18-AUG-1426731132f1fbea3f590f63069aa02b5b/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirp/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_KIRP.Mixed_DNASeq_Cont_curated.Level_2.1.1.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.mafn/aAvailableN/Ahgsc.bcm.edu_KIRP.Mixed_DNASeq_curated.Level_2.1.1.0Public18-AUG-14e706fb022f27092b45e3803f49176ab7/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_KIRP.Mixed_DNASeq_curated.Level_2.1.1.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf161:161Availableversion 2.4hgsc.bcm.edu_KIRP.Mixed_DNASeq_Cont_curated.Level_2.1.2.0Protected15-SEP-145872bc1b729174c93d17fc21dd7c86ed/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/kirp/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_KIRP.Mixed_DNASeq_Cont_curated.Level_2.1.2.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf161:161Availableversion 2.4hgsc.bcm.edu_KIRP.Mixed_DNASeq_curated.Level_2.1.2.0Public15-SEP-14f63c691f146f934ffb364b56937e7940/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/kirp/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_KIRP.Mixed_DNASeq_curated.Level_2.1.2.0/hgsc.bcm.edu_KIRP.IlluminaGA_DNASeq.1.somatic.maf

LAML: Acute Myeloid Leukemia

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
genome.wustl.edu_LAML.IlluminaGA_DNASeq.preliminary.1.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.1.0.0Public27-JUL-11bb979f5ca6ce2856f3edc9c9b6b587a4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.1.0.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.preliminary.1.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.2.0.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.2.0Public16-NOV-11ab656c661864724639153c66ab344f06/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.2.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.2.0.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.8.0.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.8.0Public02-OCT-1258b2aaa201251b2c84397eb84b07f7a2/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.8.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.8.0.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.9.0.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.9.0Public10-OCT-12395d1fce5435f51aac4bb72dce627ec1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.9.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.9.0.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.9.0.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.10.0Public05-NOV-12395d1fce5435f51aac4bb72dce627ec1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.10.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.9.0.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.preliminary.1.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.1.2.0Public24-OCT-123ea2dc27ec8a154827869caf8e53d9a6/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.1.2.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.preliminary.1.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.11.0.somatic.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.11.0Public02-JAN-1340e737d705b4f607524ae39d63b219ca/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.11.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.11.0.somatic.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.12.0.somatic.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.12.0Public15-FEB-13bfdf2473b6f28cc40588218e1ac1c33c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.12.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.12.0.somatic.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0.somatic.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0Public01-MAY-130df4340ebee4ab4bf8829ecc9031f791/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0.somatic.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0.somatic.mafn/aTCGA-1751-removedN/Agenome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.14.0Public24-JUN-13ab6c720a25fbf438a78133a0011469ec/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.14.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0.somatic.maf
genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0.somatic.maf142:142Availableversion 2.4genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.15.0Public29-OCT-13a5e8c926c9759f8c0cf02063e7718341/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/laml/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.15.0/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.13.0.somatic.maf

LGG: Brain Lower Grade Glioma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf170:170Availableversion 2.3broad.mit.edu_LGG.IlluminaGA_DNASeq.Level_2.0.1.0Public28-NOV-125ec00ad63329519d51e7934711f0dc64/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf217:217Availableversion 2.3broad.mit.edu_LGG.IlluminaGA_DNASeq.Level_2.0.2.0Public27-MAR-13b803a1e7efa81742fa2dacb2776038e5/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
TCGA_FREEZE_FINAL_ULTRAMUT_REMOVED.aggregated.capture.tcga.uuid.curated.somatic.maf289:289Availableversion 2.4broad.mit.edu_LGG.IlluminaGA_DNASeq_curated.Level_2.1.2.0Public03-JAN-14910cf0f1f338f8441c22a512a280e81f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq_curated.Level_2.1.2.0/TCGA_FREEZE_FINAL_ULTRAMUT_REMOVED.aggregated.capture.tcga.uuid.curated.somatic.maf
ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf289:289Availableversion 2.4ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected25-FEB-146b9b943f65edc65773385c98ac20761d/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lgg/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf
PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS_v6.aggregated.capture.tcga.uuid.automated.somatic.maf468:462Availableversion 2.4broad.mit.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public09-APR-149d2a6810075e80039972112ca18c7aa2/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.4.0/PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS_v6.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS_v7.aggregated.capture.tcga.uuid.automated.somatic.maf530:513Availableversion 2.4broad.mit.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.5.0Public15-DEC-14337f09e49d2b454214461b07d844369f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.5.0/PR_TCGA_LGG_PAIR_Capture_All_Pairs_QCPASS_v7.aggregated.capture.tcga.uuid.automated.somatic.maf
LGG_FINAL_ANALYSIS.aggregated.capture.tcga.uuid.curated.somatic.maf286:286Availableversion 2.4broad.mit.edu_LGG.IlluminaGA_DNASeq_curated.Level_2.1.3.0Public24-DEC-1423e38e6dfb40f25fe8e6d5233dade590/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_LGG.IlluminaGA_DNASeq_curated.Level_2.1.3.0/LGG_FINAL_ANALYSIS.aggregated.capture.tcga.uuid.curated.somatic.maf
ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.2.0.somatic.maf508:508Availableversion 2.4ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public28-APR-158e7a95407aabb77a41d796106ac943b5/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.2.0/ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.2.0.somatic.maf
ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0.protected.maf508:508Availableversion 2.4ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0Protected28-APR-157f10d1c7812e6b3f282f3c6aa3f91133/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lgg/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0/ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.2.0.protected.maf
ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.3.0.somatic.maf513:513Availableversion 2.4ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.3.0Public02-JUN-15607ab281a500e0fca5d990dd9bbd158b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lgg/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.3.0/ucsc.edu_LGG.IlluminaGA_DNASeq_automated.Level_2.1.3.0.somatic.maf
ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.3.0.protected.maf513:513Availableversion 2.4ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.3.0Protected02-JUN-15861775aed6b9ea2ed00f569be0789078/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lgg/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.3.0/ucsc.edu_LGG.IlluminaGA_DNASeq_Cont_automated.Level_2.1.3.0.protected.maf

LIHC: Liver hepatocellular carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
ucsc.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf202:236Availableversion 2.4ucsc.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected13-MAY-146e17355888efbe9da4348fb1dec9e05a/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lihc/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
An_TCGA_LIHC_External_capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf202:236Availableversion 2.4broad.mit.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public12-MAY-143c5bfcb3a64cec9aa2bc85266c09583f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/An_TCGA_LIHC_External_capture_All_Pairs.aggregated.capture.tcga.uuid.curated.somatic.maf
hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.somatic.maf202:202Availableversion 2.4hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public20-MAY-1498b5de3c83ec1a24f3a8547f73b8272c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.protected.maf79:79Availableversion 2.4hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected23-MAY-14edcb43f3cd62bf62a48239cc65abd1e7/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lihc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_LIHC.Mixed_DNASeq.1.protected.maf202:202Availableversion 2.4hgsc.bcm.edu_LIHC.Mixed_DNASeq_Cont_curated.Level_2.1.0.0Protected18-JUN-1498e0bbaa1006f499abd9c13e2810cf01/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lihc/gsc/hgsc.bcm.edu/mixed_dnaseq_cont_curated/mutations_protected/hgsc.bcm.edu_LIHC.Mixed_DNASeq_Cont_curated.Level_2.1.0.0/hgsc.bcm.edu_LIHC.Mixed_DNASeq.1.protected.maf
hgsc.bcm.edu_LIHC.Mixed_DNASeq.1.somatic.mafn/aInvalidN/Ahgsc.bcm.edu_LIHC.Mixed_DNASeq_curated.Level_2.1.0.0Public18-JUN-14a25d57a943d8a9e0c2d25f38dede16d9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/hgsc.bcm.edu/mixed_dnaseq_curated/mutations/hgsc.bcm.edu_LIHC.Mixed_DNASeq_curated.Level_2.1.0.0/hgsc.bcm.edu_LIHC.Mixed_DNASeq.1.somatic.maf
hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.somatic.maf198:198Availableversion 2.4hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public09-SEP-14f80add637bd32aa22ef5d00c8f90c7e6/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lihc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_automated.Level_2.1.1.0/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.protected.maf198:198Availableversion 2.4hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected09-SEP-14e8ec8a09be2c594ebc1655276418c532/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/lihc/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/hgsc.bcm.edu_LIHC.IlluminaGA_DNASeq.1.protected.maf

LUAD: Lung adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
LUAD.exome.cleaned.somatic.maf249:272Availableversion 2.3 broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.0.0Public08-AUG-12fdba7b2e3dc7785042a76ff395fddb94/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/luad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.0.0/LUAD.exome.cleaned.somatic.maf
PR_TCGA_LUAD_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf401:441Availableversion 2.3broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.3.0Public06-DEC-1288e23a3ab2cb053764fe8ec294afa9f1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/luad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_LUAD_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
LUAD.exome.cleaned.somatic.maf249:272Availableversion 2.3broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.1.0Public22-OCT-12edd9830d7aca6f30051639631ccc4470/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/luad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.1.0/LUAD.exome.cleaned.somatic.maf
LUAD.exome.cleaned.somatic.maf249:272Availableversion 2.3broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.2.0Public05-NOV-12edd9830d7aca6f30051639631ccc4470/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/luad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.0.2.0/LUAD.exome.cleaned.somatic.maf
PR_TCGA_LUAD_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf561:606Availableversion 2.4broad.mit.edu_LUAD.IlluminaGA_DNASeq_automated.Level_2.1.5.0Public22-MAR-14ced241ccb33157ca7e6467c880f31396/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/luad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_LUAD.IlluminaGA_DNASeq_automated.Level_2.1.5.0/PR_TCGA_LUAD_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf

LUSC: Lung squamous cell carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
LUSC_Paper_v8.final_analysis_set.12_13_11.CpG_Filtered.cleaned.maf179:179Availableversion 2.2 broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.0.0.0Public20-JAN-12599966524e4195d17ba3d1b47be5bb81/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.0.0.0/LUSC_Paper_v8.final_analysis_set.12_13_11.CpG_Filtered.cleaned.maf
LUSC_Paper_v8.aggregated.tcga.somatic.mafn/aAvailableN/Abroad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.1.0Public03-APR-12561f30bc8eb8bd676bd4d85e68f4f3c2/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.1.0/LUSC_Paper_v8.aggregated.tcga.somatic.maf
LUSC_Paper_v8.aggregated.tcga.somatic.maf178:178Availableversion 2.3broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.2.0Public08-AUG-1251349e402fc934f1ea0364ad4ca220e8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.2.0/LUSC_Paper_v8.aggregated.tcga.somatic.maf
LUSC_Paper_v8.aggregated.tcga.somatic.maf178:178Availableversion 2.3broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.3.0Public19-OCT-12a77f0045ee8341c4fd852a8ce0d0ab09/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.3.0/LUSC_Paper_v8.aggregated.tcga.somatic.maf
LUSC_Paper_v8.aggregated.tcga.somatic.maf178:178Availableversion 2.3broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.4.0Public05-NOV-12a77f0045ee8341c4fd852a8ce0d0ab09/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.4.0/LUSC_Paper_v8.aggregated.tcga.somatic.maf
LUSC_Paper_v8.aggregated.tcga.somatic.maf178:178DCCT-1275version 2.3broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.5.0Public15-JUL-13a77f0045ee8341c4fd852a8ce0d0ab09/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.1.5.0/LUSC_Paper_v8.aggregated.tcga.somatic.maf
step4_LUSC_Paper_v8.aggregated.tcga.maf2.4.migrated.somatic.maf178:178Availableversion 2.3broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.100.0.0Public21-JUN-138ed102de3ae0dc4cd2ce62157607b0d0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/lusc/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.100.0.0/step4_LUSC_Paper_v8.aggregated.tcga.maf2.4.migrated.somatic.maf

MESO: Mesothelioma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq.Level_2.1.0.0.somatic.maf83:83Availableversion 2.4sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq.Level_2.1.0.0Public28-AUG-15d3d8d83409b2faa01fab1a98829fbea1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/meso/gsc/sanger.ac.uk/illuminahiseq_dnaseq/mutations/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq.Level_2.1.0.0/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq.Level_2.1.0.0.somatic.maf
sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq.Level_2.1.1.0.somatic.maf83:83Availableversion 2.4sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq.Level_2.1.1.0Public02-SEP-15228bd19951622b8ffd732a5be5afe2a8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/meso/gsc/sanger.ac.uk/illuminahiseq_dnaseq/mutations/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq.Level_2.1.1.0/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq.Level_2.1.1.0.somatic.maf
sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_Cont.Level_2.1.1.0.protected.maf83:83Availableversion 2.4sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_Cont.Level_2.1.1.0Protected02-SEP-15c047bb5c713ebbaf5a6bbcd9ffc7328a/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/meso/gsc/sanger.ac.uk/illuminahiseq_dnaseq_cont/mutations_protected/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_Cont.Level_2.1.1.0/sanger.ac.uk_MESO.IlluminaHiSeq_DNASeq_Cont.Level_2.1.1.0.protected.maf

OV: Ovarian serous cystadenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
broad.mit.edu_OV.ABI.2.mafn/aObsoleteN/Abroad.mit.edu_OV.ABI.2.0.0Protected29-OCT-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/ov/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_OV.ABI.2.0.0/broad.mit.edu_OV.ABI.2.maf
hgsc.bcm.edu_OV.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_OV.ABI.1.0.0Protected26-NOV-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/ov/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_OV.ABI.1.0.0/hgsc.bcm.edu_OV.ABI.1.maf
hgsc.bcm.edu_OV.ABI.1.mafn/aObsoleteN/Ahgsc.bcm.edu_OV.ABI.1.1.0Protected03-DEC-08Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/ov/gsc/hgsc.bcm.edu/abi/tracerel/hgsc.bcm.edu_OV.ABI.1.1.0/hgsc.bcm.edu_OV.ABI.1.maf
broad.mit.edu_OV.ABI.2.mafn/aObsoleteN/Abroad.mit.edu_OV.ABI.2.3.0Protected16-APR-09Unknown/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/ov/cgcc/broad.mit.edu/abi/tracerel/broad.mit.edu_OV.ABI.2.3.0/broad.mit.edu_OV.ABI.2.maf
hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.mafn/aAvailableN/Ahgsc.bcm.edu_OV.SOLiD_DNASeq.Level_2.1.3.0Public16-NOV-1036d2599178bc66fdd7df22d6f4d7deda/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_OV.SOLiD_DNASeq.Level_2.1.3.0/hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf
broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.somatic.mafn/aAvailableN/Abroad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.0.0Public19-NOV-10704a0619c5167f3cdd34586e44345d15/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.0.0/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.somatic.maf
broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.somatic.maf142:142Availableversion 2.3broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.1.0Public08-AUG-120dab55f1f5e3c1b70fff7622692cd45c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.1.0/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.somatic.maf
genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.0.0.somatic.maf142:142Availableversion 2.3genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.0.0Public08-AUG-12e87cc236af9226d7304ed69dff24a803/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.0.0/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.0.0.somatic.maf
genome.wustl.edu_OV.IlluminaGA_DNASeq.1.somatic.maf88:88Availableversion 2.3genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.1.0Public08-AUG-12ccd1f67a4be5d44088f70e57b8243434/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.1.0/genome.wustl.edu_OV.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf91:91Availableversion 2.3hgsc.bcm.edu_OV.SOLiD_DNASeq.Level_2.1.4.0Public08-AUG-125c78da802a20b50517af1842cc273e52/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_OV.SOLiD_DNASeq.Level_2.1.4.0/hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf
genome.wustl.edu_OV.IlluminaGA_DNASeq.1.somatic.maf88:88Availableversion 2.3genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.2.0Public09-OCT-12ca750906ae2b1fb21946a2be48c3143b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.2.0/genome.wustl.edu_OV.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf91:91Availableversion 2.3hgsc.bcm.edu_OV.SOLiD_DNASeq.Level_2.1.5.0Public10-OCT-12a87e3b5e0c33763de29905a1a663296a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_OV.SOLiD_DNASeq.Level_2.1.5.0/hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf
ov_liftover.aggregated.capture.tcga.uuid.somatic.maf142:142Availableversion 2.3broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.0.0Public25-FEB-130058fa3b632ee189d77a78161d6175da/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.0.0/ov_liftover.aggregated.capture.tcga.uuid.somatic.maf
ov_liftover.aggregated.capture.tcga.uuid.somatic.maf142:142DCCT-1275version 2.3broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.2.0Public21-MAR-13663009aa8e2430572e8989fd3ee52bd8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.2.0/ov_liftover.aggregated.capture.tcga.uuid.somatic.maf
hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf91:91Availableversion 2.4hgsc.bcm.edu_OV.SOLiD_DNASeq.Level_2.1.6.0Public18-JUN-1300a15bd07a74273b6079e31c33e8674a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_OV.SOLiD_DNASeq.Level_2.1.6.0/hgsc.bcm.edu_OV.SOLiD_DNASeq.1.somatic.maf
step4_ov_liftover.aggregated.capture.tcga.uuid.maf2.4.migrated.somatic.maf142:142Availableversion 2.3broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.100.0.0Public20-JUN-1385a9a121e43da1ad7c593de1a62fb017/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.100.0.0/step4_ov_liftover.aggregated.capture.tcga.uuid.maf2.4.migrated.somatic.maf
broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.somatic.maf142:142Availableversion 2.3broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.2.0Public22-OCT-120d71eaab5be42d3ee79722617dea9529/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.2.0/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.somatic.maf
broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.somatic.maf142:142TCGA-1178version 2.3broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.3.0Public05-NOV-120d71eaab5be42d3ee79722617dea9529/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.3.0/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.7.somatic.maf
ov_liftover.aggregated.capture.tcga.uuid.somatic.maf142:142Availableversion 2.3broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.1.0Public07-MAR-134622811588ac2fb2025beb6b6558171f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ov/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.1.0/ov_liftover.aggregated.capture.tcga.uuid.somatic.maf

PAAD: Pancreatic adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.mafn/aTCGA-1304-not-latestN/Abroad.mit.edu_PAAD.IlluminaGA_DNASeq.Level_2.0.1.0Public28-NOV-1247d920ed0a5f586bdcee5d61b71b704e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.mafn/aTCGA-1304-latestN/Abroad.mit.edu_PAAD.IlluminaGA_DNASeq.Level_2.0.2.0Public22-MAR-135bf83088ebbdd870ca22ff88b258a8d8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf91:95Availableversion 2.4broad.mit.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public11-MAR-14789f73836b676046df5149c05945c482/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.4.0/PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf
bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq.1.somatic.maf131:131Availableversion 2.4bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0Public19-AUG-1409fb622112cbb516aea9b24d3c3e806c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/bcgsc.ca/illuminahiseq_dnaseq_automated/mutations/bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq_automated.Level_2.1.0.0/bcgsc.ca_PAAD.IlluminaHiSeq_DNASeq.1.somatic.maf
hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq.1.protected.maf113:113Availableversion 2.4hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected20-AUG-14e9fb3d4df6c0b592ba642dafb7b2e79e/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/paad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq.1.somatic.maf131:131Availableversion 2.4hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public20-AUG-14798f2c919eb8698991c77ff0bfb71b53/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0/hgsc.bcm.edu_PAAD.IlluminaGA_DNASeq.1.somatic.maf
ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf131:137Availableversion 2.4ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0Protected26-AUG-147e55b8493c911c073f423a75ec87fa91/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/paad/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0/ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.0.0.protected.maf
ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf131:137Availableversion 2.4ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public26-AUG-14485c060f4c6cd14c96fe2f82b7735b64/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0/ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.0.0.somatic.maf
ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.1.0.somatic.maf129:135Availableversion 2.4ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public09-SEP-1444b5640f6cc0aa01255c108053cba232/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/ucsc.edu/illuminaga_dnaseq_automated/mutations/ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.1.0/ucsc.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.1.0.somatic.maf
ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf131:137Availableversion 2.4ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected09-SEP-14b20313c7240063e794db94b1d87ec2c0/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/paad/gsc/ucsc.edu/illuminaga_dnaseq_cont_automated/mutations_protected/ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/ucsc.edu_PAAD.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0.protected.maf
PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS_v5.aggregated.capture.tcga.uuid.automated.somatic.maf144:149Availableversion 2.4broad.mit.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.5.0Public12-SEP-1412f9a39a021c64ec7ea657f926a8b4fd/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.5.0/PR_TCGA_PAAD_PAIR_Capture_All_Pairs_QCPASS_v5.aggregated.capture.tcga.uuid.automated.somatic.maf
All_Samples_In_Freeze.aggregated.capture.tcga.uuid.curated.somatic.maf123:123Availableversion 2.4broad.mit.edu_PAAD.IlluminaGA_DNASeq_curated.Level_2.1.2.0Public05-DEC-14f29cacb89c78f75ad626c5ac00d77abb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq_curated.Level_2.1.2.0/All_Samples_In_Freeze.aggregated.capture.tcga.uuid.curated.somatic.maf
freeze2.aggregated.capture.tcga.uuid.curated.somatic.maf146:146Availableversion 2.4broad.mit.edu_PAAD.IlluminaGA_DNASeq_curated.Level_2.1.3.0Public06-MAR-1597bdfba4b10d79efb91a54f135fec749/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq_curated.Level_2.1.3.0/freeze2.aggregated.capture.tcga.uuid.curated.somatic.maf
PAAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf147:146Availableversion 2.4broad.mit.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.9.0Public23-JUN-15cc276439128d4c75b26fbd12b852b842/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/paad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PAAD.IlluminaGA_DNASeq_automated.Level_2.1.9.0/PAAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

PCPG: Pheochromocytoma and Paraganglioma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_PCPG_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf183:181Availableversion 2.4broad.mit.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public27-JUN-1428a26779708de17e55ce13fdf9a29e9f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/pcpg/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.0.0/PR_TCGA_PCPG_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_PCPG_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf183:181Availableversion 2.4broad.mit.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public23-JUL-1428a26779708de17e55ce13fdf9a29e9f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/pcpg/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.1.0/PR_TCGA_PCPG_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_PCPG_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf183:181Availableversion 2.4broad.mit.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public12-SEP-1428a26779708de17e55ce13fdf9a29e9f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/pcpg/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PCPG.IlluminaGA_DNASeq_automated.Level_2.1.2.0/PR_TCGA_PCPG_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf

PRAD: Prostate adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR-TCGA-Analysis_set.aggregated.tcga.somatic.maf83:83Availableversion 2.3broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.1.0.0Public08-AUG-125ef958eb96188743e1685b4b3ea9f15d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.1.0.0/PR-TCGA-Analysis_set.aggregated.tcga.somatic.maf
PR-TCGA-Analysis_set.aggregated.tcga.somatic.maf83:83Availableversion 2.3broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.1.1.0Public19-OCT-12c96298465dae89b2f41308262b3d6999/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.1.1.0/PR-TCGA-Analysis_set.aggregated.tcga.somatic.maf
PR-TCGA-Analysis_set.aggregated.tcga.somatic.maf83:83Availableversion 2.3broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.1.2.0Public05-NOV-12c96298465dae89b2f41308262b3d6999/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.1.2.0/PR-TCGA-Analysis_set.aggregated.tcga.somatic.maf
PR-TCGA-Analysis_set.aggregated.tcga.somatic.maf83:83QUAL-408version 2.3broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.1.3.0Public15-JUL-13c96298465dae89b2f41308262b3d6999/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.1.3.0/PR-TCGA-Analysis_set.aggregated.tcga.somatic.maf
PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf148:183Availableversion 2.3broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.0.1.0Public06-DEC-12974e67596b8b4a2271e99dd1c36f3ac3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf171:216Availableversion 2.3broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.0.2.0Public27-MAR-13124929a8657f3573497e8d40ae30b501/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
PRAD_Capture_Unique_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.curated.somatic.maf251:251Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_curated.Level_2.1.2.0Public18-NOV-13f85fc6b235697f350b0606fc7a378219/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq_curated.Level_2.1.2.0/PRAD_Capture_Unique_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.curated.somatic.maf
PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v4_curated.aggregated.wgs.tcga.uuid.curated.protected.maf20:20Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_Cont_curated.Level_2.1.3.0Protected04-MAR-14f652f444b36fc614f94c4965af6c3b7e/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_cont_curated/mutations_protected/broad.mit.edu_PRAD.IlluminaGA_DNASeq_Cont_curated.Level_2.1.3.0/PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v4_curated.aggregated.wgs.tcga.uuid.curated.protected.maf
PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf188:233DCCT-1275version 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.0.3.0Public17-JUL-13f1cd2b41bfec0d040da2bad34f12a3d2/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v4_curated.aggregated.capture.tcga.uuid.curated.somatic.maf245:288Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_curated.Level_2.1.3.0Public04-MAR-14a3bd01897b2dcce924338ca382edc5f9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq_curated.Level_2.1.3.0/PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v4_curated.aggregated.capture.tcga.uuid.curated.somatic.maf
PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.curated.somatic.maf261:309Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_curated.Level_2.1.4.0Public14-MAR-14a0551ad00bb1f216bdeaef3c4aafed92/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq_curated.Level_2.1.4.0/PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.curated.somatic.maf
PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v5.aggregated.capture.tcga.uuid.automated.somatic.maf300:348Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public22-MAR-1410e6f8dc4f758ca46919a85e8ff35cf0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.4.0/PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v5.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v6.aggregated.capture.tcga.uuid.automated.somatic.maf425:473Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.5.0Public05-DEC-14c9ad2faf25bff3ca5ffeb2f7ffe8f433/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.5.0/PR_TCGA_PRAD_PAIR_Capture_All_Pairs_QCPASS_v6.aggregated.capture.tcga.uuid.automated.somatic.maf
PRAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf499:546Availableversion 2.4broad.mit.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.6.0Public27-NOV-158314f1aefa84fd3f9461c9b5cfc4544f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/prad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_PRAD.IlluminaGA_DNASeq_automated.Level_2.1.6.0/PRAD_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

READ: Rectum adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.mafn/aAvailableN/Ahgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.0.0Public17-NOV-117510ef32d65fcaf4bb2c86d89c76ab08/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.0.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.mafn/aAvailableN/Ahgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.1.0Public03-FEB-12ac360ab4a58967856725add770935245/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.1.0/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf35:35Availableversion 2.3hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.1.0Public08-AUG-12b5fe9448ad495a30688459d5b85f404b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.1.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf38:38Availableversion 2.3hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.2.0Public08-AUG-12f9ebc047eef8f33b6f1ce6725c7d17a1/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.2.0/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf53:53Availableversion 2.3hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.3.0Public09-OCT-12fc08dc07ecc2a7de4edfaa7a4c23b100/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.3.0/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf53:53Availableversion 2.3hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.4.0Public09-JAN-13fc08dc07ecc2a7de4edfaa7a4c23b100/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.4.0/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf35:35Availableversion 2.3hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.4.0Public14-MAR-130ef9d4211a71ec4cf400144b41b5478f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.4.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf35:35Availableversion 2.3hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.5.0Public25-MAR-130ef9d4211a71ec4cf400144b41b5478f/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.5.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.protected.maf1:1Availableversion 2.3hgsc.bcm.edu_READ.SOLiD_DNASeq_Cont.Level_2.1.4.0Protected20-MAR-132ebc882454471dc99f5cf2e5ca2e9cef/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq_cont/mutations_protected/hgsc.bcm.edu_READ.SOLiD_DNASeq_Cont.Level_2.1.4.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.protected.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.protected.maf1:1Availableversion 2.3hgsc.bcm.edu_READ.SOLiD_DNASeq_Cont.Level_2.1.5.0Protected25-MAR-132ebc882454471dc99f5cf2e5ca2e9cef/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq_cont/mutations_protected/hgsc.bcm.edu_READ.SOLiD_DNASeq_Cont.Level_2.1.5.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.protected.maf
hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf81:81Availableversion 2.3hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.5.0Public18-APR-13c7f3b9cdabdea1e4c8df81c1d0c92891/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/illuminaga_dnaseq/mutations/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.Level_2.1.5.0/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.protected.maf64:64Availableversion 2.3hgsc.bcm.edu_READ.IlluminaGA_DNASeq_Cont.Level_2.1.5.0Protected18-APR-1347d395c7e09db90f834864f5f7ad8c79/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/read/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont/mutations_protected/hgsc.bcm.edu_READ.IlluminaGA_DNASeq_Cont.Level_2.1.5.0/hgsc.bcm.edu_READ.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.protected.maf1:1Availableversion 2.4hgsc.bcm.edu_READ.SOLiD_DNASeq_Cont.Level_2.1.6.0Protected18-JUN-13e3d33b9f24ca0c4bf1270750671b55dc/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq_cont/mutations_protected/hgsc.bcm.edu_READ.SOLiD_DNASeq_Cont.Level_2.1.6.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.protected.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf35:35Availableversion 2.4hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.6.0Public18-JUN-134489f78e962fc59f9634efb2922dc8b5/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.6.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf35:35Availableversion 2.3hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.2.0Public16-OCT-124647a72739535202046dd0645b8bcf78/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.2.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf
hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf35:35Availableversion 2.3hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.3.0Public09-JAN-134647a72739535202046dd0645b8bcf78/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/read/gsc/hgsc.bcm.edu/solid_dnaseq/mutations/hgsc.bcm.edu_READ.SOLiD_DNASeq.Level_2.1.3.0/hgsc.bcm.edu_READ.SOLiD_DNASeq.1.somatic.maf

SARC: Sarcoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
SARC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf259:259Availableversion 2.4broad.mit.edu_SARC.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public11-FEB-157aa3dc0a55fa64a119b469a598607175/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_SARC.IlluminaGA_DNASeq_automated.Level_2.1.0.0/SARC_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf
genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.1.1.0.somatic.maf247:247Availableversion 2.4genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0Public15-MAY-155f2a45a4679ee7f51bff49515f291e91/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.1.0/genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.1.1.0.somatic.maf
genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.1.3.0.somatic.maf254:252Availableversion 2.4genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.3.0Public08-OCT-155b811c2b73c161c31d5bcfcbd06985c9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.3.0/genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.1.3.0.somatic.maf
genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.1.4.0.somatic.maf247:247Availableversion 2.4genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.4.0Public27-JAN-16516dda870df4b047076fa96d97dfd310/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/sarc/gsc/genome.wustl.edu/illuminahiseq_dnaseq_automated/mutations/genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.Level_2.1.4.0/genome.wustl.edu_SARC.IlluminaHiSeq_DNASeq_automated.1.4.0.somatic.maf

SKCM: Skin Cutaneous Melanoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_SKCM_Capture.aggregated.capture.tcga.uuid.somatic.maf221:219Availableversion 2.3broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.0.0Public24-SEP-12633fb5f909e9bb6a8b5c734e93e3da8b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.0.0/PR_TCGA_SKCM_Capture.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_SKCM_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf253:251Availableversion 2.3broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.0.1.0Public28-NOV-12879968df4477cefa6bef84ee2e4d60ac/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_SKCM_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_SKCM_PAIR_Capture_All_Pairs.aggregated.capture.tcga.uuid.somatic.maf255:253Availableversion 2.3broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.2.0Public17-DEC-12006ca644ae4955dd24a8058f9149fe87/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.2.0/PR_TCGA_SKCM_PAIR_Capture_All_Pairs.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_SKCM_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf271:270Availableversion 2.3broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.0.2.0Public27-MAR-13aba503e491d0131e9fd721b7a78c4cf0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_SKCM_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
TCGA_SKCM_266_PAIR.aggregated.capture.tcga.uuid.somatic.maf266:264Availableversion 2.3broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.3.0Public03-MAY-13f7ac3867332af690434d21da82d309c3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.3.0/TCGA_SKCM_266_PAIR.aggregated.capture.tcga.uuid.somatic.maf
skcm_clean_pairs.aggregated.capture.tcga.uuid.somatic.maf297:296Availableversion 2.4broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.4.0Public02-OCT-13d80be542f8cfa921d3d05d18f0f1ac02/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.1.4.0/skcm_clean_pairs.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_SKCM_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf298:297DCCT-1275version 2.4broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.0.3.0Public16-JUL-13578a970025ecff4489bf8ccd2f5d6a91/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq.Level_2.0.3.0/PR_TCGA_SKCM_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_SKCM_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf369:369Availableversion 2.4broad.mit.edu_SKCM.IlluminaGA_DNASeq_automated.Level_2.1.4.0Public22-MAR-149902325e61936e2b5683dd5c70c0657b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_SKCM.IlluminaGA_DNASeq_automated.Level_2.1.4.0/PR_TCGA_SKCM_PAIR_Capture_All_Pairs_QCPASS_v4.aggregated.capture.tcga.uuid.automated.somatic.maf
hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq.1.protected.maf57:57Availableversion 2.4hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0Protected23-NOV-137f0ab688deb949a00b0ac8fe33749d54/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/skcm/gsc/hgsc.bcm.edu/illuminaga_dnaseq_cont_automated/mutations_protected/hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq_Cont_automated.Level_2.1.1.0/hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq.1.protected.maf
hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq.1.somatic.maf344:344Availableversion 2.4hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public23-NOV-13c697be73ec9e12c1fa0ba7a92f4b98b0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/skcm/gsc/hgsc.bcm.edu/illuminaga_dnaseq_automated/mutations/hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq_automated.Level_2.1.1.0/hgsc.bcm.edu_SKCM.IlluminaGA_DNASeq.1.somatic.maf

STAD: Stomach adenocarcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_STAD_Capture.aggregated.tcga.mafn/aInvalidN/Abroad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.1.0.0Protected05-MAR-1209d0bb5b0504bb865e2a66641f8a1d9f/dccfiles_prod/tcgafiles/distro_ftpusers/tcga4yeo/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.1.0.0/PR_TCGA_STAD_Capture.aggregated.tcga.maf
PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf173:199Availableversion 2.3broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.0.0.0Public06-DEC-12dc71fc3057a1d5759285d2020a8627af/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.0.0.0/PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf240:270Availableversion 2.3broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.0.1.0Public27-MAR-13b2e93e0dd6f61cacdee5c285c2d0945a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf264:296Availableversion 2.3broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.0.2.0Public30-APR-1307158e15ddb6adb166866558b3b77d0b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS_v3.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS_v5.aggregated.capture.tcga.uuid.automated.somatic.maf372:413Availableversion 2.4broad.mit.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.1.5.0Public27-MAR-146ca345c5c0d228ba6edbab2ba18e11c3/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.1.5.0/PR_TCGA_STAD_PAIR_Capture_All_Pairs_QCPASS_v5.aggregated.capture.tcga.uuid.automated.somatic.maf
An_TCGA_STAD_External_capture_All_Pairs.aggregated.capture.tcga.uuid.automated.somatic.maf91:92Availableversion 2.4broad.mit.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.1.6.0Public05-DEC-148b766130598d587839b13f7834dc2c5e/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/stad/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_STAD.IlluminaGA_DNASeq_automated.Level_2.1.6.0/An_TCGA_STAD_External_capture_All_Pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

TGCT: Testicular Germ Cell Tumors

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
TGCT_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf156:150Availableversion 2.4broad.mit.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public13-JAN-15830814479efb64bf0b5ce3a6ce9e6b5c/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/tgct/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_TGCT.IlluminaGA_DNASeq_automated.Level_2.1.0.0/TGCT_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

THCA: Thyroid carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
AN_TCGA_THCA_PAIR_Capture_08Oct2012.aggregated.capture.tcga.uuid.somatic.maf324:324Availableversion 2.3broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.0.0Public10-OCT-12803e67111649e6b5b9f8d3726ffaeed5/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.0.0/AN_TCGA_THCA_PAIR_Capture_08Oct2012.aggregated.capture.tcga.uuid.somatic.maf
AN_TCGA_THCA_PAIR_Capture_13Oct2012.aggregated.capture.tcga.uuid.somatic.maf323:323Availableversion 2.3broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.1.0Public12-NOV-12a84f953a54978226afb6ad37d8284431/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.1.0/AN_TCGA_THCA_PAIR_Capture_13Oct2012.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_THCA_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf307:322Availableversion 2.3broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.0.1.0Public28-NOV-12f7fe710b9ba59ee2891b9d48bd7b4455/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.0.1.0/PR_TCGA_THCA_PAIR_Capture_All_Pairs_QCPASS.aggregated.capture.tcga.uuid.somatic.maf
PR_TCGA_THCA_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf366:382DCCT-1275version 2.3broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.0.2.0Public27-MAR-1350dc74644d1ce1d2ce9be18b9834dde9/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.0.2.0/PR_TCGA_THCA_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.somatic.maf
AN_TCGA_THCA_PAIR_Capture_ALLQC_01Jun2013_430.aggregated.capture.tcga.uuid.somatic.maf406:426Availableversion 2.4broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.2.0Public18-JUN-13253fe2a5da6ec54a6abf2837cb6f6d60/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.2.0/AN_TCGA_THCA_PAIR_Capture_ALLQC_01Jun2013_430.aggregated.capture.tcga.uuid.somatic.maf
AN_TCGA_THCA_PAIR_Capture_ALLQC_01Jun2013_430.aggregated.capture.tcga.uuid.somatic.maf406:426Availableversion 2.4broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.3.0Public25-JUN-1370721b507feb5f3382584bb445dc71ff/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.3.0/AN_TCGA_THCA_PAIR_Capture_ALLQC_01Jun2013_430.aggregated.capture.tcga.uuid.somatic.maf
AN_TCGA_THCA_PAIR_Capture_ALLQC_14Aug2013_429.aggregated.capture.tcga.uuid.somatic.maf405:425Availableversion 2.4broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.4.0Public19-SEP-133edf75d78bed78876a12808ab710ca01/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thca/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_THCA.IlluminaGA_DNASeq.Level_2.1.4.0/AN_TCGA_THCA_PAIR_Capture_ALLQC_14Aug2013_429.aggregated.capture.tcga.uuid.somatic.maf

THYM: Thymoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
THYM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf123:125Availableversion 2.4broad.mit.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public06-MAR-15bdfe67787727a162a5ca2758dab8f246/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/thym/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_THYM.IlluminaGA_DNASeq_automated.Level_2.1.0.0/THYM_pairs.aggregated.capture.tcga.uuid.automated.somatic.maf

UCEC: Uterine Corpus Endometrial Carcinoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.hypermutated.somatic.mafn/aAvailableN/Agenome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.0.0Public28-OCT-11e9970eaa1bd8c6e4609cafd05dfb9341/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.0.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.hypermutated.somatic.maf
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.mafn/aAvailableN/Agenome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.0.0Public28-OCT-116d0c70d81abeff30f7a69c98ce122dd0/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.0.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.mafn/aAvailableN/Agenome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.1.0Public17-JAN-12640915b1f40e15d1c279eb6dd9b44e31/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.1.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.mafn/aAvailableN/Agenome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.2.0Public22-MAR-121457f967afbbfe3b37e4cbaa4955bac4/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.2.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf248:248Availableversion 2.2genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.3.0Public18-APR-12332e3256c19f5a27d853bd57e86d71bb/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.3.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf248:248Availableversion 2.3genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.4.0Public24-OCT-12f5fc23abcf049e06ab614c9ab3ce947b/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.4.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf
An_UCEC_194.aggregated.tcga.somatic.maf194:194Availableversion 2.3broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.0.0Public08-AUG-127dd627a91e2325f32bcf54a1e26bd091/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.0.0/An_UCEC_194.aggregated.tcga.somatic.maf
An_UCEC_194.aggregated.tcga.somatic.maf194:194Availableversion 2.3broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.1.0Public19-OCT-12bf76fe7dd827919958e55543471c177a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.1.0/An_UCEC_194.aggregated.tcga.somatic.maf
An_UCEC_194.aggregated.tcga.somatic.maf194:194Availableversion 2.3broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.2.0Public05-NOV-12bf76fe7dd827919958e55543471c177a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.2.0/An_UCEC_194.aggregated.tcga.somatic.maf
An_UCEC_194.aggregated.tcga.somatic.maf194:194DCCT-1275version 2.3broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.3.0Public15-JUL-13bf76fe7dd827919958e55543471c177a/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.3.0/An_UCEC_194.aggregated.tcga.somatic.maf
step4_An_UCEC_194.aggregated.tcga.maf2.4.migrated.somatic.maf194:194Availableversion 2.3broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.100.0.0Public21-JUN-13d1239a9369a5e388c3b26eabba355cca/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/broad.mit.edu/illuminaga_dnaseq/mutations/broad.mit.edu_UCEC.IlluminaGA_DNASeq.Level_2.100.0.0/step4_An_UCEC_194.aggregated.tcga.maf2.4.migrated.somatic.maf
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.6.somatic.maf248:248Availableversion 2.3genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.6.0Public24-JUN-1388a250fb1bcf352a6a74026436a0c7d8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.6.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.6.somatic.maf
genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf248:248Availableversion 2.3genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.5.0Public18-MAR-1388a250fb1bcf352a6a74026436a0c7d8/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucec/gsc/genome.wustl.edu/illuminaga_dnaseq/mutations/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.5.0/genome.wustl.edu_UCEC.IlluminaGA_DNASeq.Level_2.1.somatic.maf

UCS: Uterine Carcinosarcoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
AN_TCGA_UCS_PAIR_Capture_56.aggregated.capture.tcga.uuid.curated.somatic.maf56:56Availableversion 2.4broad.mit.edu_UCS.IlluminaGA_DNASeq_curated.Level_2.1.0.0Public07-JAN-149e783ba7397db856c0d50e45c3031bff/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/broad.mit.edu/illuminaga_dnaseq_curated/mutations/broad.mit.edu_UCS.IlluminaGA_DNASeq_curated.Level_2.1.0.0/AN_TCGA_UCS_PAIR_Capture_56.aggregated.capture.tcga.uuid.curated.somatic.maf
PR_TCGA_UCS_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf57:57Availableversion 2.4broad.mit.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.0.0Public11-MAR-14a357468ffbeacc184a0c4932c3b2d395/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.0.0/PR_TCGA_UCS_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_UCS_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.automated.somatic.maf57:57Availableversion 2.4broad.mit.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public03-DEC-14e2775effe32fbc9a0ed919130dd6ab2d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.1.0/PR_TCGA_UCS_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.automated.somatic.maf
PR_TCGA_UCS_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.automated.somatic.maf57:57Availableversion 2.4broad.mit.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.2.0Public15-DEC-14e2775effe32fbc9a0ed919130dd6ab2d/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/ucs/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_UCS.IlluminaGA_DNASeq_automated.Level_2.1.2.0/PR_TCGA_UCS_PAIR_Capture_All_Pairs_QCPASS_v2.aggregated.capture.tcga.uuid.automated.somatic.maf

UVM: Uveal Melanoma

MAF File NameTumor Samples:Normal SamplesDeploy StatusMAF VersionArchive NameProtection StatusDeploy DateMD5Deploy Location
PR_TCGA_UVM_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf80:80Availableversion 2.4broad.mit.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.1.0Public27-OCT-146adba3391c638f0b6691b57dc82d72ff/dccfiles_prod/tcgafiles/distro_ftpusers/anonymous/tumor/uvm/gsc/broad.mit.edu/illuminaga_dnaseq_automated/mutations/broad.mit.edu_UVM.IlluminaGA_DNASeq_automated.Level_2.1.1.0/PR_TCGA_UVM_PAIR_Capture_All_Pairs_QCPASS_v1.aggregated.capture.tcga.uuid.automated.somatic.maf

File System Only MAF Files

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