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Experiments Available for Download

Experiment IDExperiment TitleAssay TypeOrganism
abate-00279Activator protein-1 transcription factors are associated with progression and recurrence of prostate cancerGene ExpressionMus musculus
alber-00221Assembly of microarrays for genome-wide measurement of DNA copy numberaCGHHomo sapiens
amund-00328Integrating global gene expression and radiation survival parameters across the 60 cell lines of the National Cancer Institute Anticancer Drug Screen.Gene ExpressionHomo sapiens
arono-00162Identification of large-scale embryonic and oncogenic transcriptional modules in human colon cancer using mouse models comparisonsGene ExpressionMus musculus
augen-00260A Gene Expression Profile That Defines Colon Cell Maturation In VitroGene ExpressionHomo sapiens
bakal-00023Vessie_affy_celGene ExpressionHomo sapiens
balma-00281Genetic architecture of mouse skin inflammation and tumor susceptibilityGene ExpressionMus musculus
becic-00229Gene expression analysis of prostate cancersGene ExpressionHomo sapiens
becic-00235Gene expression alterations in prostate cancer predicting tumor aggression and preceding development of malignancyGene ExpressionHomo sapiens
beer-00153Gene-expression profiles predict survival of patients with lung adenocarcinomaGene ExpressionHomo sapiens
beer-00225A Genomic Strategy to Refine Prognosis in Early-Stage Non Small-Cell Lung CancerGene ExpressionHomo sapiens
bonda-00136Molecular basis of age associated cytokine dysregulation in LPS stimulated macrophagesGene ExpressionMus musculus
bowle-00223A catalytic antioxidant (AEOL 10150) attenuates expression of inflammatory genes in strokeGene ExpressionMus musculus
brown-00173Molecular portraits of human breast tumoursGene ExpressionHomo sapiens
carpt-00469Copy Number and Targeted Mutational Analysis Reveals Novel Somatic Events in Metastatic Prostate TumorsaCGHHomo sapiens
cho-00156Gene Expression in Ovarian Cancer Reflects Both Morphology and Biological BehaviorGene ExpressionHomo sapiens
cress-00222Identification of novel E2F1-regulated genes by microarrayGene ExpressionMus musculus
dobbi-00100Interlaboratory comparability study of cancer gene expression analysis using oligonucleotide microarrays.Gene ExpressionHomo sapiens
EXP-485TCGA Analysis of Gene Expression for Ovarian Serous Cystadenocarcinoma Using Affymetrix HT_HG-U133AGene ExpressionHomo sapiens
EXP-517TCGA Ovarian: BCGC Ovary Serous Cystadenocarcinoma using Affymetrix HuEx-1_0-st-v2 array (lbl, Level 3)ExonHomo sapiens
EXP-520Gene Expression Profiles Predictive of Outcome and Age in Infant Acute Lymphoblastic Leukemia: a Children’s Oncology Group StudyGene ExpressionHomo sapiens
EXP-550TCGA (READ):  Analysis of DNA Methylation for rectal adenocarcinoma (READ) Using Illumina Infinium Human DNA Methylation 27 platform (HumanMethylation27)(jhu-usc)MethylationHomo sapiens
EXP-574TCGA(Kirc):Gene Expression Analysis of TCGA samples using Agilent Expression 244K microarrays(UNC)Gene ExpressionHomo sapiens
EXP-576TCGA (LUAD): Gene Expression Analysis of TCGA samples using Agilent Expression 244K microarrays. (UNC)Gene ExpressionHomo sapiens
EXP-578Gene Expression Profiles of Pediatric B-Precursor High-Risk Acute Lymphoblastic Leukemia (COG Study AALL0232 - Cohort 1).Gene ExpressionHomo sapiens
EXP-592TCGA (LUSC): Analysis of Gene Expression for Non Small Cell Lung Cancer, Squamous Cell Carcinoma Using Affymetrix HT_HG-U133A (Broad)Gene ExpressionHomo sapiens
EXP-597I-SPY1 Trial DataGene ExpressionHomo sapiens
EXP-598TCGA (LUSC): Analysis of DNA Methylation for LUSC using Illumina Infinium HumanMethylation450 platform (jhu-usc)MethylationHomo sapiens
EXP-608TCGA (Laml): Analysis of RNA Expression Array Data for Acute Myeloid Leukemia Using Affymetrix HG-U133 Plus 2.0(WUSTL)Gene ExpressionHomo sapiens
EXP-615TCGA(Lusc): Characterization of Tumor Samples by Array based Comparative Genome Hybridization on Agilent Human Genome CGH 415K Platform (Harvard)aCGHHomo sapiens
EXP-618TCGA (Lusc): Gene Expression Analysis of TCGA Lung Squamous samples using AgilentG4502A_07_3 (UNC)Gene ExpressionHomo sapiens
EXP-620TCGA (Coad): Analysis of DNA Methylation for COAD using Illumina Infinium HumanMethylation450 platform (Jhu-usc)MethylationHomo sapiens
EXP-621TCGA (Coad): Gene Expression Analysis of TCGA Colon samples using Agilent Expression 244K microarrays. (UNC)Gene ExpressionHomo sapiens
fine-00037Rembrandt_GeneExpressionGene ExpressionHomo sapiens
gabri-00003TCGA Analysis of RNA Expression for Glioblastoma MultiformeGene ExpressionHomo sapiens
geral-00117Comprehensive gene expression analysis of prostate cancer reveals distinct transcriptional programs associated with metastatic diseaseGene ExpressionHomo sapiens
geral-00143An estrogen receptor-negative breast cancer subset characterized by a hormonally regulated transcriptional program and response to androgenGene ExpressionHomo sapiens
golub-00095Diffuse large B-cell lymphoma outcome predictionGene ExpressionHomo sapiens
golub-00142Gene expression correlates of clinical prostate cancer behaviorGene ExpressionHomo sapiens
golub-00236Multiclass cancer diagnosis using tumor gene expression signaturesGene ExpressionHomo sapiens
golub-00299Chemosensitivity prediction by transcriptional profilingGene ExpressionHomo sapiens
golub-00327Sanger cell line Affymetrix gene expression projectGene ExpressionHomo sapiens
golub-00392Gefitinib (Iressa) induces myeloid differentiation of acute myeloid leukemiaGene ExpressionHomo sapiens
golub-00460Prediction of central nervous system embryonal tumour outcome based on gene expressionGene ExpressionHomo sapiens
gray-00215A collection of breast cancer cell lines for the study of functionally distinct cancer subtypesGene ExpressionHomo sapiens
gray-00248Genomic and transcriptional aberrations linked to breast cancer pathophysiologiesGene ExpressionHomo sapiens
gray-00283Copy number aberrations in mouse breast tumors reveal loci and genes important in tumorigenic RTK signalingaCGHMus musculus
gray-00298Genomic and transcriptional aberrations linked to breast cancer pathophysiologies - Genome Copy Number (Scanning and OncoBAC)aCGHHomo sapiens
green-00001Alterations in Gene Expression Profiles during Prostate Cancer ProgressionGene ExpressionMus musculus
green-000302-methoxyestradiol (2ME2) induces mammary gland differentiation through amphiregulin-EGFR mediated signalingGene ExpressionMus musculus
green-00155Global expression profiling identifies signatures of tumor virulence in MMTV-PyMT-transgenic miceGene ExpressionMus musculus
green-00160Initiating oncogenic event determines gene-expression patterns of human breast cancer modelsGene ExpressionMus musculus
green-00276Integrated SV40 T/t-antigen Cancer Signature in Aggressive Breast, Prostate and Lung Carcinomas with Poor PrognosisGene ExpressionMus musculus
hanas-00078Distinctive molecular profiles of high-grade and low-grade gliomas based on oligonucleotide microarray analysisGene ExpressionHomo sapiens
harri-00137Predictors of Resistance to Preoperative Trastuzumab and Vinorelbine for HER2-Positive Early Breast CancerGene ExpressionHomo sapiens
hermi-00423SDRF Sources IssueGene ExpressionMus musculus
hoffm-00161Measure the temporal and spatial expression levels(part 2)Gene ExpressionMus musculus
hoffm-00220Changes in Gene Expression Profiles in Developing B Cells of Murine Bone MarrowGene ExpressionMus musculus
huang-00340Changes in Gene expression during the development and progression of mammary tumors in MMTV-Wnt-1 and MMTV-Neu TG miceGene ExpressionMus musculus
hunte-00454The origins of breast cancer prognostic gene expression profilesGene ExpressionMus musculus
jacks-00113Murine KRASLA lung cancer gene expressionGene ExpressionMus musculus
jacob-00182

Gene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study

GEO

Gene ExpressionHomo sapiens
kim-00171Patched Heterozygous Mouse Rhabdomyosarcomas Overexpress Spp1 and Matrix MetalloproteinasesGene ExpressionMus musculus
krahe-00060Expression profiling reveals fundamental biological differences in acute myeloid leukemiaGene ExpressionHomo sapiens
kuche-00038TCGA Characterization of Tumor Samples by Array based Comparative Genome Hybridization on Agilent Human Genome CGH 244A PlatformaCGHHomo sapiens
kuche-00093TCGA Characterization of Tumor Samples by Array based Comparative Genome Hybridization on Agilent Human Genome CGH 244A Platform-OvarianaCGHHomo sapiens
kuche-00282Genetic mechanisms in Apc-mediated mammary tumorigenesisGene ExpressionMus musculus
kuppe-00390Broad: Lesional gene expression profiling in cutaneous T-cell lymphoma reveals natural clusters associated with disease outcomeGene ExpressionHomo sapiens
laird-00051TCGA Analysis of DNA Methylation for GBM Using Illumina Golden Gate BeadArray platformMethylationHomo sapiens
laird-00098TCGA Analysis of DNA Methylation for GBM Using Illumina Golden Gate BeadArray platform (IlluminaDNAMethylation_OMA003_CPI)MethylationHomo sapiens
laird-00224TCGA Ovarian: Analysis of DNA Methylation for Ovarian Using Illumina Infinium Human DNA Methylation 27 platform (HumanMethylation27) (USC)MethylationHomo sapiens
landi-00077EAGLE ProjectGene ExpressionHomo sapiens
lau-00174 Expression profiles of osteosarcoma that can predict response to chemotherapyGene ExpressionHomo sapiens
lau-00212Expression profiles of osteosarcoma that can predict response to chemotherapyGene ExpressionHomo sapiens
lavar-00109Differential expression of genes characterize neuroblastic tumours with distinct ploidy status.Gene ExpressionHomo sapiens
lavar-00111SPECIFIC GENE EXPRESSION PROFILES ASSOCIATED WITH INFANT DISSEMINATED NEUROBLASTOMAGene ExpressionHomo sapiens
liu-00193PK Oncogenes ExpressionGene ExpressionHomo sapiens
liu-00251TCGA Analysis of RNA Expression for Glioblastoma MultiformeGene ExpressionHomo sapiens
liu-00258Gene expression profiles of BRCA1-linked, BRCA2-linked, and sporadic ovarian cancersGene ExpressionHomo sapiens
louis-00379Gene Expression-based Classification of Malignant Gliomas Correlates Better with Survival than Histological ClassificationGene ExpressionHomo sapiens
merco-00121In silico dissection of cell-type-associated patterns of gene expression in prostate cancerGene ExpressionHomo sapiens
meyer-00114TCGA Analysis of Gene Expression for Ovarian Serous Cystadenocarcinoma Using Affymetrix HT_HG-U133AGene ExpressionHomo sapiens
meyer-00180TCGA GBM: Analysis of Gene Expression for Glioblastoma Multiforme Using Affymetrix HT_HG-U133A (Broad)Gene ExpressionHomo sapiens
meyer-00191Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclassesGene ExpressionHomo sapiens
mille-00271Uppsala cohortGene ExpressionHomo sapiens
nelso-00262 Gene expression profiling of gliomas strongly predicts survivalGene ExpressionHomo sapiens
nevil-00068Secretory Activation in Wildetype Mice from Preg12 to Lac9Gene ExpressionMus musculus
notte-00422

Molecular Dissection of Colon Cancer

GEO

Gene ExpressionHomo sapiens
orkin-00383Identification of distinct molecular phenotypes in acute megakaryoblastic leukemia by gene expression profilingGene ExpressionHomo sapiens
paakk-00303Transcription profiling of human pulp and odontoblasts reponse to TGF-beta1Gene ExpressionHomo sapiens
reich-00151Evolutionary conservation of otd/Otx2 transcription factor action: a genome-wide microarray analysis in DrosophilaGene ExpressionDrosophila melanogaster
rosen-00146NWU - Multiple myeloma glucocortoid resistanceGene ExpressionHomo sapiens
rosen-00293 Identification of tumor-initiating cells in a p53-null mouse model of breast cancerGene ExpressionMus musculus
showe-00150Wistar_Showe_Gaffney_Head-Neck-U133AGene ExpressionHomo sapiens
showe-00157Gene expression signature predicts lymphatic metastasis in squamous cell carcinoma of the oral cavityGene ExpressionHomo sapiens
shtey-00351for Matt EldridgeGene ExpressionHomo sapiens
smith-00014Expression profiling of acute lymphoblastic leukemia.Gene ExpressionHomo sapiens
socci-00046TCGA(GBM): Analysis of Copy Number for GBM Using Agilent Human Genome CGH Microarray Kit 244K (MSKCC)aCGHHomo sapiens
socci-00214TCGA Analysis of Copy Number for OV Using Agilent Human Genome CGH Microarray Kit 244KaCGHHomo sapiens
sohn-00358GS-DASLGene ExpressionHomo sapiens
staud-00261The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphomaGene ExpressionHomo sapiens
stegm-00394Broad:Identification of AML1-ETO modulators by chemical genomicsGene ExpressionHomo sapiens
strue-00134Identification of BRCA1 mutation carriers using oligonucleotide arraysGene ExpressionHomo sapiens
topal-00039TCGA (GBM): MicroRNA  Analysis of TCGA GBM samples using Agilent MicroRNA array (UNC)microRNAHomo sapiens
topal-00047TCGA (GBM): Gene Expression Analysis of TCGA GBM samples on Agilent 244K Custom Gene Expression G4502A-07-1 platform (UNC)Gene ExpressionHomo sapiens
topal-00050TCGA (GBM): Gene Expression Analysis of TCGA GBM samples (UNC)Gene ExpressionHomo sapiens
topal-00211Gene Expression Analysis of TCGA Ovarian samplesGene ExpressionHomo sapiens
topal-00242MicroRNA  Analysis of TCGA Ovarian samples using Agilent MicroRNA arraymicroRNAHomo sapiens
topal-00243Gene Expression Analysis of TCGA Ovarian samplesGene ExpressionHomo sapiens
trich-00099Identification of a PAX-FKHR gene expression signature that defines molecular classes and determines the prognosis of alveolar rhabdomyosarcomas.Gene ExpressionHomo sapiens
vince-00013Integrated Genomics and Transcriptomic Analyses of Ductal Carcinoma In situ of the BreastGene ExpressionHomo sapiens
weins-00145A gene expression database for the molecular pharmacology of cancerGene ExpressionHomo sapiens
weins-00306Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study (U133 platform)Gene ExpressionHomo sapiens
weins-00312Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study (U95 platform)Gene ExpressionHomo sapiens
willm-00090Gene Expression Profiling Reveals Novel Genes for Improved Risk Classification and Outcome Prediction in Pediatric Acute Lymphoblastic Leukemia: Identification, Cloning, and Validation of OPAL1Gene ExpressionHomo sapiens
willm-00119Gene Expression Profiling of Adult Acute Myeloid Leukemia Identifies Novel Biologic Clusters Associated with Clinical Characteristics and OutcomeGene ExpressionHomo sapiens
willm-00140TARGET-ALL Expression: Children's Oncology Group Study 9906 for High-Risk Pediatric ALLGene ExpressionHomo sapiens
willm-00144Gene Expression Profiling for Molecular Classification and Outcome Prediction in Infant Leukemia Reveals Novel Biologic Clusters and Pathways for Treatment FailureGene ExpressionHomo sapiens
woost-00041Transcript Profiling of Cancer Cell Line PanelGene ExpressionHomo sapiens
wu-00004Gender specific expressionGene ExpressionHomo sapiens


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