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Shell Script | Use and Function | ||||||||||||
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LoadLgXMLLoadMedDRA | Loads a file specified in the Medical Dictionary for Regulatory Activities (MedDRA) format. Options:
LoadMedDRA -in "file:///path/to/file
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LoadNCIHistory | Loads from an the HL7 Vocabulary mif file. Options: Imports NCI History data to the LexEVS repository.
Versions File Format Information:
Sample record:
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LoadOBO | Loads a file specified in the Open Biomedical Ontologies (OBO) format.
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LoadOWL | Loads an OWL file.
Options:
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LoadRadLexProtegeFrames | URI or path specifying location of the pprj file. Imports from a RadLex xml file to a LexBIG repository. Requires that the pprj file be configured with reference to a RadLex xml file as follows:
Example:
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LoadUMLSSemnet | Loads the UMLS Semantic Network, provided as a collection of files in a single directory. The following files are expected to be provided from the National Library of Medicine (NLM) distribution:
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LoadFMA | Imports from an FMA database to a LexEVS repository. Requires that the pprj file be configured with a database URN, username, password for an FMA MySQL based database. The FMA.pprj file and MySQL dump file are available at http://sig.biostr.washington.edu/projects/fm/ upon registration.
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LoadHL7RIM | Converts an HL7 RIM MS Access database to a LexGrid database
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LoadMetaData | Loads optional XML-based metadata to be associated with an existing coding scheme.
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LoadMrMap | Loads mappings file(s), provided in UMLS RRF format. Specifically MRMAP.RRF and MRSAT.RRF.
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