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  1. http://mircwiki.rsna.org/index.php?title=CTP-The_RSNA_Clinical_Trial_Processor - The official RSNA wiki site that is updated regularly by the developer of CTP. This always contains the latest bleeding edge release of CTP.
  2. http://gforge.nci.nih.gov/frs/?group_id=312 NBIA GForge files archive - The National Biomedical Imaging Archive (NBIA) software's download site lists all the binaries for installing NBIA.  Each Each release of NBIA includes a .zip distribution of CTP (e.g. "nbia_CTP_Client_5.0.1.zip").  This This version usually lags behind the RSNA site but has been tested for compatibility with the latest NBIA release.

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Once you have downloaded CTP you will need to extract it to a location on your local hard drive. The method for doing this varies by operating system and the installer you chose to download.

  1. NBIA GForge installer - use your favorite zip extraction tool and unzip the nbia_CTP_Client_X.X.X.zip to a location on your local hard drive.
  2. RSNA installer
    1. Windows Installation - Simply double click the CTP-installer.jar and use the GUI installer program to select the location where you'd like to install CTP.
    2. Linux/Mac Installation - Open a console/terminal and navigate to the location where you saved CTP-installer.jar. Then type "java -jar CTP-installer.jar" and the GUI installer program will initiate, allowing you to choose where you'd like to install CTP.

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Code Block
titleconfig.xml

<Configuration>
  <Server port="24080"/>
  <Pipeline name="Main Pipeline">

     <ImportService 
               name="dicomImport"
               id="dicomImport"
               class="org.rsna.ctp.stdstages.DicomImportService"
               root="roots/dicomImportService" 
               port="24104" 
               logConnections="no"
               suppressDuplicates="no" />
   
     <Processor
            name="pixel-checker"
            id="pixel-checker"
            class="org.rsna.ctp.stdstages.DicomFilter"
            root="roots/pixel-checker" 
            script="scripts/pixel-checker-filter.script"
            quarantine="quarantines/pixel-checker" />
    
    <Processor
            name="idmap"
            class="org.rsna.ctp.stdstages.IDMap"
            root="roots/idmap" />

   <StorageService
            name="storage"
            id="storage"
            class="org.rsna.ctp.stdstages.FileStorageService"
            root="/projects/qin/CTPStorageDir"                      <!-- ROOT: CUSTOMIZE THIS! --!>
            type="month"
            timeDepth="0"
            acceptDuplicateUIDs="yes"
            acceptDicomObjects="yes"
            acceptXmlObjects="no"
            acceptZipObjects="no"
            acceptFileObjects="no" 
            returnStoredFile="yes"
            quarantine="quarantines/storage" />
      
     <Anonymizer
       name="DicomAnonymizer"
       class="org.rsna.ctp.stdstages.DicomAnonymizer"
       root="de-id/dicom-anonymizer"
       script="scripts/QIN-PROSTATE-BWH.script"                    <!-- SCRIPT: CUSTOMIZE THIS! --!>
       lookupTable="scripts/bwh_deid_list_internal.txt"             <!-- LOOKUP TABLE: CUSTOMIZE THIS! --!>
       quarantine="quarantines/dicom-anonymizer" />

  </Pipeline>

</Configuration>

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Lookup table is optional, and when specified, it allows to map the original IDs to the anonymized patient IDs. The format of this file is the following:

Code Block

ptid/ORIGINAL_SUBJECT_ID=DEIDENTIFIED_SUBJECT_ID

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