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For those who are new to caArray, we have prepared a short guide to help you find necessary information fast. |
Tool Overview
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Installation and Downloads
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- caArray Github Repository
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Support for caArray
- End User Forum
- Developer Forum
- caArray Developers Listserv
- caArray Users Listserv
- Report a Defect or Request a Feature at caArray Jira Tracker
- Mini-how to Submit Bug reports or Feature Requests in JIRA A tutorial on how to use JIRA for caArray.
- Application Support
What's New
caArray 2.5.1 was released in October, 2013 and is available on the NCI CBIIT production server.
For details and more news, visit What's new for caArray.
Presentations, Demos and Other Materials
- caArray Demos
- caArray overview presented at the AACR 2011 Annual Meeting
- Newly Made caArray Demonstration (applicable up to caArray 2.3.x) (Make sure your speakers are on to play audio.)
- Previous caArray Demonstration – 20-minute Audio over Slides and Screencast (applicable up to caArray 2.0.x) (Make sure your speakers are on to play audio.)
- Instructor-led training on caArray
- caArray Roadmap
- caArray Brochures
Documentation and Training
- caArray2 Documentation
- An important notice on Using UPT to create groups for caArray
- caArray Project site
- NCI UPT FAQ
- caGrid Service Deployment Guide
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- CSM and UPT User Documentation Releases 4.2 and Earlier
- UPT 3.2.2 Installation Guide
- UPT 4.2.1 User/Programmer/Installation Guide
- caArray archived files tab (GForge) (login required)
caArray Knowledge Base
Find the answers to the most frequently asked questions; understand how caArray works.
If you still don't know if caArray is for you, explore the caArray Case Studies. Case studies show examples of how caArray could be used in different scenarios.
Citations
For For a list of articles that discuss caArray, visit caArray Citations.
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caIntegrator can extract the genomic data from caArray hosted on either a private server or the NCI site. You can:
- Extract the genomic data into caIntegrator.
- Integrate the genomic data with the clinical data and imaging data in caIntegrator.
- Perform genomic data analysis with the built-in GenePattern Tool within caIntegrator.
The current release of caIntegrator, version 1.4, works with caArray 2.5.
You may use the publicly accessible NCI site. To install a local copy, download a copy of the software.
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