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- Filter a study or an assay until you reach a selection of investigation data you are interested in downloading.
- On the Investigation Details page, click Download Selected Data.
The Request Data Files dialog box appears. - You have two options:
- Transfer the file with Globus, which is useful when the file is very large. If you choose this option, click the checkbox and then click Request Download. The Transfer Files page in Globus opens. For more information about transferring downloading files with Globus, see Uploading Files with Globus , see Chapter 2: Browsing, Searching, and Downloading Investigations or Globus Support
.Multiexcerpt include MultiExcerptName ExitDisclaimer nopanel true PageWithExcerpt wikicontent:Exit Disclaimer to Include - Receive a link through email that you can use to download the file to your computer. If you choose this option, enter your email address in the box, click the I'm not a robot box, and then click Request Download.
The Download Requested window appears.
Click Ok. Periodically check your email inbox for the link to the file.
- Transfer the file with Globus, which is useful when the file is very large. If you choose this option, click the checkbox and then click Request Download. The Transfer Files page in Globus opens. For more information about transferring downloading files with Globus, see Uploading Files with Globus , see Chapter 2: Browsing, Searching, and Downloading Investigations or Globus Support
Downloading Large Files with Globus
Globus is a service that enables large file transfers securely. You must have an account with Globus and install
Globus Connect Personal to use it to download investigation files to CSSI DCC. If you do not already have an account, you are prompted to create one when you start the download process. Multiexcerpt include MultiExcerptName ExitDisclaimer nopanel true PageWithExcerpt wikicontent:Exit Disclaimer to Include
To upload files using Globus
- If you haven't already, start Globus Connect Personal.
- Begin downloading your ISA-Tab file by creating a project in CSSI DCC and selecting a file. For more information on this process, go to Chapter 2: Browsing, Searching, and Downloading Investigations.
On the Request Data Files page, click the Transfer with Globus checkbox.
If you have not yet logged into Globus, a log in page appears.
Info title Globus Support If you have trouble logging in, go to Globus Support
or send an email to support@globus.org.Multiexcerpt include MultiExcerptName ExitDisclaimer nopanel true PageWithExcerpt wikicontent:Exit Disclaimer to Include After you successfully log in, the Globus Transfer Files page appears. One of the Endpoints you configured when you installed Globus Connect Personal is already populated, though you can change it.
Select the starting endpoint (on the left) where the file(s) you want to upload reside(s). Narrow down to the path if necessary.
Confirm or change the destination endpoint (on the right).
Click the right arrow button that points to the destination to begin the transfer request.
A message appears on the screen when the transfer request is submitted successfully. You receive an email when the request is granted and the transfer succeeds.
Once an administrator approves the upload request, the uploaded, unpublished file appears in the Investigation Projects section of the page. It is not yet published, so you must now publish it to use it in CSSI DCC.
