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This special 90-minute session of the CBIIT Speaker Series will feature demos of three tools that were developed through funding by the Informatics Technology for Cancer Research (ITCR) Program.
UCSC Xena Single Cell Genome Viewer (Profiling and visualization of tumor genomes on a single-cell level) — Sparse genomic profiling of multiple individual cancer cells is a tool of choice for characterization of genetic heterogeneity and clonal structure in tumors. I will outline a computational and visualization workflow we have developed for this purpose and provide evidence for diagnostic utility of single-cell genomics in prostate cancer
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BIOS:
Jim Robinson is a Principal Software Engineer at the University of California, San Diego. His work over the past 20 years has focused on the design and development of bioinformatics and visualization software for researchers and clinicians in the biomedical community. Jim has been the architect and lead developer of the Integrative Genomics Viewer (IGV) since its inception.
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