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Comment: Added a statement based on my testing.

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PartTo Remove
InvestigationIn the Node panel, right click the investigation node and select Remove investigation.
StudyIn the Node panel, right click the study node and select Remove study.
AssayIn the Node panel, right click the assay node and select Remove assay.
Element groupIn the Element panel, click the X to the right of the element group heading. (If the system requires the element group, the X is not available.)
ElementIn the Element panel, click the X to the right of the element field. (If the system requires the element, the X is not available.)
ProcessIn the Visualization panel, in process view, click Delete Process.
Process stepIn the Visualization panel, in process view, click the X next to the process step icon.