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  • NIAID TB Bioportal 

    The NIAID Office of Cyber Infrastructure and Computational Biology will share their TB Portals Program, including their efforts at imaging data collection, data dissemination, tool development, and data science research. https://tbportals.niaid.nih.gov

     
    • Program introduction – Alex Rosenthal
    • Demo #1 – Alyssa Long
    • Demo #2 – Andrei Gabrielian
    • Imaging data science research – Ziv Yaniv & Gabriel Rosenfeld
  • TCIA Update
  • Imaging Data Commons Update

Upcoming Calls

DateTentative Agenda
December 7, 2020
  • NIAID TB Bioportal (Darrell Hurt and team)
January 4, 2021No meeting
February 1, 2021
  • Orchestration of distributed image archives (Jonas De Almeida)

    Summary: Recent advances in the use of HTTP range requests to traverse bioformats*, coupled with a general move to “zero footprint” image informatics solutions, enable the creation of image archives as an exercise in governance. A particular feature of this configuration is that the images do not have to be copied or moved from their primary location. This has two interesting effects: a) the image owner remains in control of its governance; and b) training of AI classifiers can be federated across image sets that are not even shared.

    * Bremer E, Saltz J, Almeida JS. ImageBox 2 – Efficient and rapid access of image tiles from whole-slide images using serverless HTTP range requests. J Pathol Inform 2020;11:29

March 1, 2021
April 5, 2021

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