Page History

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CL- What is the target date for submission?

JT- October 1, 2021

TP- Did we want to take a similar approach to the variant filter file? Who will be involved? Who will lead it? Right now everyone is using a different version of a variant calling filter file, the goal is to create a universal variant calling filter file.

AL- Is there a way to come up with a unified reference genome? Can we decide which genome should be used?

HG- Each group has their own vcf filter file. I suspect there to be overlap, but we should come together and discuss the differences.

DD- It can be a bit of a moving target. We use a vcf file mostly based off the one Elaine has posted. Some of the filters are not well understood by the group.

SZ- Curating a resource would be valuable in order to decipher between somatic and germ-line mutations.

Action items

•  Unknown User (hechtt) to share paper about canine reference genomes