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ItemWhoTalking Points
Discussion of potential submission of FidoCure  Animal Health data

Sommers, Connie (NIH/NCI) [E] 

  • Create wish list of data to request from FidoCure
New article from Purdue Office of ResearchDebbie Knapp
DGAB Updates

Kuffel, Gina (NIH/NCI) [C] 

New Data Submission Request

  • Link to data submission request form
  • Osteosarcoma study from Auburn University
  • 7 cases
  • Clinical and Transcriptomic data
  • Presented to DGAB on 7/24/23

Recently Approved

  • COTC021
    • "Evaluation of Orally Administered mTOR inhibitor Rapamycin in Dogs in the Adjuvant Setting with Osteosarcoma"
    • 152 cases, 93 files
    • Full clinical dataset is available for both arms of this trial (324 dogs)
    • Scan H & E is available
    • Status: Approved by SAC on 6/30/23, templated-based loading files have been received, waiting on files and file transfer manifest

ICDC Studies in Active Submission

  • ORGANOIDS01
    • Approved by SAC on 9/22/22
    • “Characterization of healthy and diseased canine tissues and organoids"
    • Iowa State University
    • Status: Data has been loaded to the Dev and QA tiers, all files have been indexed by DCF team, testing is in progress
BPSC Updates

Kuffel, Gina (NIH/NCI) [C] 

  • 2022 BPSC Review Article

    The manuscript entitled "Leading the Pack: Best Practices in Comparative Canine Cancer Genomics to Inform Human Oncology" has been accepted by the journal of Veterinary and Comparative Oncology. The ICDC will pay to ensure this article is open access.

Upcoming Steering Committee Meeting

Unknown User (parchmentr)

  • Enter date: Wednesday September 20th
2023 Q2 Software Release

Kuffel, Gina (NIH/NCI) [C] 

  • Released on August 15, 2023
  • New Features
    • JBrowse now supports text search so go ahead and find your favorite gene (Try it…Visit this page, select GLIOMA01 under the “Study” facet, and then click on the “Case Files” tab, select the first BAM file and click the “View in JBrowse” button, enter TP53 into the text search bar)
    • JBrowse has a new track that maps gene features from hg38 to canFam3
    • The Study, Study Details, and Program Details pages now feature interoperability between the ICDC, the Imaging Data Commons, and the Cancer Imaging Archive through the use of APIs to fetch details about imaging data hosted outside of the ICDC
    • Clinical observation data is now available for download on a node-by-node basis through a dedicated tab within the Study Details page
    • The Privacy Policy is now available within the footer of the Landing page
    • Updates to the ICDC News page
    • New README available within the “My Files” Cart page

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