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Page History
Agenda
EVS Discussion
Open System Tickets
Description | Actions, Update | |
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NCI-SCTASK0750465 | Security team has flagged EVS stage host( nciws-p803) for JQuery vulnerability with full details as per below. | Eric asked us to remove it from lower tiers but we found no evidence of it there. It should be removed from Stage Jason sent email message to remove the jar from Stage. Appears that Systems was asking security team about location of file; sec team
ACTION: - wait till next week for update |
NCI-INC0779210 | OUTAGE: NCIterms outage - Wed 9/27 → Thu 9/28 | Wait to watch status; ticket probably will be closed soon | OUTAGE: Outage continues: Tue 10/3 evening , Wed 10/4 | Note: there was an attack last night, Tue Oct 3 from 4:48 pm -> 5:10 pm.NCI-RITM0473138 | OUTAGE: Discuss DOS strategy, tactics with Systems |
Issues deploying prod software to DataQA |
SYSTEMS | ||||||||||||||||||||||||||||||||||
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EVS transition to virtual machines | STATUS: As decided from last week, we will wait to switch STAGE from on prem to VM once PROD VM is ready; so we can switch both PROD and STAGE at same time . | |||||||||||||||||||||||||||||||||
Systems | BACKGROUND: On Friday Sept 29th, we were asked to deploy a banner on public-facing websites if the government was shutdown. There was confusion about who was reponsible for which pages - and how to do it quickly (especially if systems groups goes to bare-bones support level. While the government was not shut down, we still want the ability to handle it better in the future. to be able to update public-facing pages with banners quickly and efficiently, with Consistent styling desired for all sites - in case the need ever arises again (in case of another shutdown/emergency/etc) ACTION:
ACTION: |
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LEXEVS UPDATES | |
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Monthly Planning and Focus | Completed Sprint - Sprint 213 (Oct 2 - Oct 27) – LINK TO Jira Sprint 213 Current Sprint - Sprint 214 (Oct 28 - Nov24) LINK TO Jira Sprint 214
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SYSTEMS | EVS transition to virtual machines | Systems |
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Application | URL | Developer/POC |
Term Browser | Guidehouse/Kim Ong | |
Metathesaurus Browser | Guidehouse/Kim Ong | |
Term Suggestion Application | Guidehouse/Kim Ong | |
EVS Explore | WCI/Brian Carlsen | |
EVSRESTAPI (Swagger Page) | WCI/Brian Carlsen | |
EVS website | Clint Malone? | |
Report Exporter | Mayo/Andrew Moore | |
LexEVS CTS2 docs | Mayo/Tracy Safran | |
LexEVS CTS2 Landing Page | Mayo/Tracy Safran | |
EVS Semantic Integration Platform | ESI/Ye Wu |
ACTION:
- Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on
Monthly Planning and Focus
Completed Sprint - Sprint 212 (Sept 4 - Sept 29) – Burndown Report
Current Sprint - Sprint 213 (Oct 2 - Oct 27) LINK TO Jira Sprint 213
(see EVSREPEXP-475 -> 483)
RMI Retirement - in progress
Unfortunately, I do not have a detailed update at this time, other than there are efforts to update the test script. I believe that the the RMI is turned off on STAGE, and the test script would test other components to verity that there are no unseen side-effects.
- Improvements, Refactoring Code Debt, Feature development:
- LEXEVS-5341 Update Spring to Spring 6
- LEXEVSCTS2-453 Update CTS2 welcome with digital sytle requirements (header, footer, etc)
- Examine feasibility of Java 17
- BACKGROUND: a small number of LexEVS components (aka dependencies) are being phased off of java 8 (or are no longer being supported on java 8). We ideally want to use a current version of those components (dependencies). IF the current version of that component is only supported on Java 14 or later (just as an example), then we would have to migrate the ENTIRE LexEVS stack to Java 14 or later. (Note that the current Java version is Java 21 LTS, and the most popular non-LTS version is Java 14). So there is a risk that a vulnerability is found in the older version of the component/dependency and we would have to either migrate everything quickly to a new version, or not use that component (which might not be possible), or shutdown LexEVS entirely. Note that there are certain versions of Java which are "long-term support" versions - meaning that they will be supported for several years beyond non-LTS versions. LTS versions are Java 8, Java 11, Java 17, and Java 21.
- OBJECTIVE: find out what would it be like to upgrade from Java 8 LTS to Java 17 LTS. How hard would it be? How long might it take?
- LEXEVS-5361- Investigate Java 17
- Miscellaneous bug fixes (several small bugs that have been identified over time and need to be addressed)
- EVSREPEXP-491 resolve branch-download list not being displayed on chrome browser (now FIXED)
- EVSREPEXP-433 Security issue: set-value vulnerability (in progress)
- LEXEVSCTS2-452 test_associations_subject_of call revealed hierarchy bug
- EVSREPEXP-478 Feedback form is not coming up
- LEXEVS-5252 Read an Entity by URI throwing a 302 error
- LEXEVSCTS2-431 Service resource does not populate Service name/version
- Investigate ERROR messages (both reported by Jason Lucas, and in
catalina.out
)
ACTIONS
- Benson, Mark (NIH/NCI) [C] to add JIRA ticket to debug error messages found during outage to Sprint 213
- Coding complete on lexevs services - except for isolated dependencies
- The isolated dependencies largely depend on using an updated version of Java (e.g. they are using more current Java versions. Java 21 LTS is the current version. The more popular non-LTS Java version is Java 14)
- Scott is investigating costs and feasibility of Java 17 (see LEXEVS-5361 above)
- LEXEVSCTS2-447 javax-servlet - on hold, until we update Java 17
- LEXEVSCTS2-446 spring-boot - on hold, until we update Java 17
- Work on NCIt Browser - ehcache beta on dev. Kim approves promotion (Scott)
- updated version of Java (e.g. they are using more current Java versions. Java 21 LTS is the current version. The more popular non-LTS Java version is Java 14)
- Scott is investigating costs and feasibility of Java 17 (see LEXEVS-5361 above)
- LEXEVSCTS2-447 javax-servlet - on hold, until we update Java 17
- LEXEVSCTS2-446 spring-boot - on hold, until we update Java 17
- Work on NCIt Browser - ehcache beta on dev. Kim approves promotion (Scott)
Vulnerable dependencies - in progress
Vulnerable dependencies - in progress
- Improving unit testing is still in progress
EVSREPEXP-475- "Apply Digital Styling to Report Exporter" is now on PROD
- TADA/DEMO: https://evs.cancer.gov/report-exporter/
Feedback form
- Need to research approval procedure, Mark was asked to reach out to OCPL
- Andrew to supply copy of survey form from RE
ACTIONS
- Benson, Mark (NIH/NCI) [C] to report on info found out from OCPL on
Statistics Dashboard
OBJECTIVE
Complete Migration of Statistics Dashboard from SumoLogic to DataDog by March 2024
STATUS
The queries used in the Statistics Dashboard have been shared with < someone on migration team > (as of Sept 2023).
They are working on migrating from "SumoLogic" format to DataDog format
- SumoLogic Query:
- Data Dog Query
<note: removed images of DataDog vs SumoLogic queries, as they didn't add much to the discussion anyway >
ACTIONS
- Safran, Tracy (NIH/NCI) [C] ask how migration is going (show # of queries, # migrated, etc)
On Hold
Waiting on AWS team
Team Absences
Mayo Team - Andrew off Oct 27
MSC -
Leidos -
QA -
Gov -
Team - Andrew off Nov14
MSC -
Leidos -
QA -
Gov -
DECIDED: Data Deployment should continue as planned - no reason to delay.
BROWSER UPDATES
QA UPDATES
Terminology Updates and Schedule
Met today
Will do monthly terminology week starting
Then will work on META afterwards
DECIDED: Data Deployment should continue as planned - no reason to delay.
BROWSER UPDATES
note outage discussion above
QA UPDATES
Terminology Updates and Schedule
Everyone is humbly asked to complete NIH Anti-Harassment training as soon.
Unless your contracting company tells you otherwise - Please check and verify your status on theNIH HHS.gov Learning Portal to confirm completion.LexEVS Technical Debt Progress
Technical Debt Related Update | Estimated Effort | Status |
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Report Exporter vulnerabilities - design | 4 days | |
Report Exporter vulnerabilities - implementation | 5 days | |
Unit testing | 2 days | |
QA | 2 days | |
Deployment | 5 days (elapsed) |
Vocabularies Slated for Production
Terminology Updates and Schedule
...
Vocabulary Name | Local Name | Version | Arrival Date | Loaded to data-qa DB | Date to Stage | Date to Production |
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Vocabulary Name in LexBIG | Short Name | Version identifier | Date the vocabulary arrived for processing | Has the vocabulary been loaded to the data-qa database? | Approximate date the vocabulary version is scheduled to move to staging | Approximate date the vocabulary version is scheduled to move to production |
NCI Thesaurus | NCIt | 23.08d | 08/28/2023 | yes | 09/11/23 | 09/13/23 |
NCIt-ChEBI | NCIt-ChEBI | AUg2023 | 08/28/2023 | yes | 09/11/23 | 09/13/23 |
NCIt-HGNC | NCIt-HGNC | Aug2023 | 08/28/2023 | yes | 09/11/23 | 09/13/23 |
SwissProt | SwissProt | Aug2023 | 08/28/2023 | yes | 09/11/23 | 09/13/23 |
ChEBI | ChEBI | v225 | 09/05/23 | yes | 09/15/23 | 09/18/23 |
HGNC | HGNC | Sept2023 | 09/05/23 | yes | 09/15/23 | 09/18/23 |
QA Schedule and Status
...
Application and Version | Percentage Complete | Estimated Completion Date per Iteration | Priority Level | Type Of Testing | Current Tier for Release (DEV, QA, Stage, Prod) | Expected Production Date |
EVS REST API (v1.6) | 100% | 5/27/2022 | High | Progression + Regression | QA | 6/6/2022 |
EVS Explore (v1.6) | 100% | 5/27/2022 | High | Progression + Regression | QA | 6/6/2022 |
EVS REST API(v1.6) | 100% | 6/1/2022 | High | Regression | Stage | 6/6/2022 |
EVS Explore(v1.6) | 100% | 6/2/2022 | High | Regression | Stage | 6/7/2022 |
EVS REST API(22.05e) - Monthly Data Deployment | 100% | 6/1/2022 | High | Regression | Stage | 6/3/2022 |
EVS REST API(22.05e) - Monthly Data Deployment | 100% | 6/3/2022 | High | Regression | Production | 6/3/2022 |
EVS REST API(v1.6) | 100% | 6/6/2022 | High | Regression | Production | 6/6/2022 |
EVS Explore(v1.6) | 100% | 6/7/2022 | High | Regression | Production | 6/7/2022 |
NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment) | 100% | 6/3/2022 | High | Regression | Stage | 6/6/2022 |
NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment) | 100% | 6/6/2022 | High | Regression | Production | 6/8/2022 |
EVS REST API(22.06d) - Monthly Data Deployment | 100% | 6/30/2022 | High | Regression | Stage , Production | 6/30/2022 |
NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment | 100% | 7/8/2022 | High | Smoke | Stage,Production | 7/8/2022 |
NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment) | 100% | 6/3/2022 | High | Regression | Stage | 6/6/2022 |
NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment | 100% | 7/8/2022 | High | Smoke | Stage,Production | 7/8/2022 |
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment) | 100% | 7/12/2022 | High | Smoke | Stage | 7/12/2022 |
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment) | 100% | 7/13/2022 | High | Smoke | Production | 7/13/2022 |
EVS REST API(22.07d) - Monthly Data Deployment | 100% | 7/27/2022 | High | Regression | Stage , Production | 7/27/2022 |
NCIt,NCIm,TermForm(22.07d) - Monthly Data Deployment | 100% | 8/1/2022 | High | Smoke | Stage,Production | 8/1/2022 |
NCIt,NCIm,TermForm(CanMED, GO & HGNC AUG 2022 Deployment) | 100% | 8/3/2022 | High | Smoke | Stage,Production | 8/3/2022 |
EVS REST API - 1.6.1 (Hot Fix Deployment) | 100 % | 8/3/2022 | Highest | Progression + Regression | Stage,Production | 8/4/2022 |
Attendees
Name | Role | Present |
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Remennik, Lyubov | NIH/NCI | |
Safran, Tracy | NIH/NCI [C] | |
Ong, Kim L | NIH/NCI [C] | |
Lucas, Jason R | NIH/NCI [C] | |
Bauer, Scott | NIH/NCI [C] | |
Alkis, Barry | NIH/NCI [C] | <checked in> |
Solie, Chuck | NIH/NCI [C] | |
Kondareddy, Swathi | NIH/NCI [C] | |
Singh, Itendra | NIH/NCI [C] | |
Zhang, Chao | NIH/NCI [C] | |
Johnson, Connie | NIH/NCI [C] | |
Whiteman, Lori | NIH/NCI [C] | |
Benson, Mark | NIH/NCI [C] | |
Andrew Moore | NIH/NCI [C] |
JIRA Issues
Recent EVS Stats Dashboard Related Bugs and Features
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Recent Report Exporter Related Bugs and Features
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Recent LexEVS Related Bugs and Features
Jira | ||||||||||||
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Recent CTS2 Service Related Issues
Jira | ||||||||||||
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