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...
OBO Class | OBO Entity | LexGrid Model Element | Notes | ||
---|---|---|---|---|---|
Document Header | format-version |
| Not mapped. | ||
Document Header | data-version | CodingScheme.representsVersion | Creates a codingSchemeVersion and SystemRelease record. If not specified, then hard coded "UNASSIGNED" | ||
Document Header | version | CodingScheme.representsVersion | Deprecated - use data-version if present. | ||
Document Header | date |
| Not mapped. | ||
Document Header | saved-by |
| Ignored but included if contained in the remark entity. | ||
Document Header | auto-generated-by |
| Ignored but included if contained in the remark entity. | ||
Document Header | subsetdef |
| Not mapped. | ||
Document Header | import |
| Deprecated - Imports are used to assemble a larger document from smaller. | ||
Document Header | typeref |
| Deprecated. | ||
Document Header | synonymtypedef |
| Not mapped. | ||
Document Header | idspace |
| Not mapped.The idspace is a triple - localName, URN and description. | ||
Document Header | default-relationship-id-prefix |
| Not mapped. | ||
Document Header | id-mapping | CodingScheme.supportedAssociation | This is more generalized than the LexGrid model, as it supports mapping between any id's. Note that its primary purpose, however, is to handle supportedAssociation. | ||
Document Header | remark | CodingScheme.entityDescription | Will combine multiple remark entities into the entityDescription. | ||
Document Header | default-namespace | codingScheme.codingScheme | Will use default-namespace if provided; otherwise will use filename without the extension. | ||
Document Header | default-namespace | codingScheme.formalName | Will use default-namespace if provided; otherwise will use filename without the extension. | ||
Document Header | default-namespace | codingScheme.registeredName | Combination of "urn:lsid:bioontology.org:" and if provided, the value in "default-namespace"; but if not will use filename without the extension. | ||
|
| codingScheme.defaultLanguage | Hardcoded "en" | ||
|
| codingScheme.isNative | Hardcoded "true" | ||
Stanza | id | CodedEntry.conceptCode |
| ||
Stanza | name | CodedEntry.entityDescription |
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="669b28a45b2f4608-8cb51abb-40b94715-a670bdb2-e2c14452577aebb9dd61b2e5"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.presentation['textualPresentation'].text |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="e7ef8a9890393492-4cd2903d-4cd54854-9c12ab3a-281c84371f6be6ad27dc2192"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.presentation['textualPresentation'].isPreferred = true |
| ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | alt_id |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="fcc75b1777f99951-7b29a818-4d484624-87eea09b-9c0004aeac7ddcb8d9089ce6"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.property['alt_id'].propertyId |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ff2339206447583d-e34c3fc3-463e4727-9caa843d-90f70516e8669bc1974a098e"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.property['alt_id'].text |
| ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | is_anonymous | CodedEntry.isAnonymous = true |
| ||
Stanza | is_obsolete | CodedEntry.isActive = false |
| ||
Stanza | def | CodedEntry.definition |
| ||
|
| CodedEntry.definition.isPreferred = true |
| ||
Stanza | def.dbxref |
| See dbxref | ||
Stanza | comment | CodedEntry.comment.text |
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="5e7fb48567e958fb-f4b234d5-44294f4e-a23d9690-32eea54b3c839b4603b739f0"><ac:plain-text-body><![CDATA[ | Stanza | subset | property[subset tag] | See subsetdef | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6d20a463f62464dd-ad2ea609-43bf4344-8e8482be-3bba012acbffcad301448485"><ac:plain-text-body><![CDATA[ | Stanza | synonym | presentation['textualPresentation'].text |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="234e00f06fddde91-1d7106a5-432f4e5b-863a874f-405ad8d375f26ce06cd0f745"><ac:plain-text-body><![CDATA[ | Stanza | synonym.scope | presentation['textualPresentation'].degreeOfFidelity |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="4d410edd796aa0d9-2fcefea8-4b054e69-916b9ad8-bbc73efb046ec371d41d94cf"><ac:plain-text-body><![CDATA[ | Stanza | synonym.type | presentation['textualPresentation'].representationalForm |
| ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | synonym.dbxref |
| (see dbxref) | ||
Stanza | exact_synonym |
| See synonym | ||
Stanza | narrow_synonym |
| See synonym | ||
Stanza | broad_synonym |
| See synonym | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="28084eb6765d9a8a-2d0c2971-46fc4afd-809baa7b-dfa36522f49f1ad6caf79790"><ac:plain-text-body><![CDATA[ | Stanza | xref | associations.['mapsTo'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | xref_analog |
| See synonym | ||
Stanza | xref_unk |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6316c028969541db-5b738d33-4b4d4a62-90dd89f2-5379247db66ea41ad814ba95"><ac:plain-text-body><![CDATA[ | Stanza | is_a | associations.['hasSubtype'] | Reverse of the source and target. | ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | is_a.namespace |
| If present, the supplied namespace becomes the owning "codingScheme". | ||
Stanza | is_a.derived | associations.hasSubtype.associationQualifier | If present, need to include derived in the supportedAssociationQualifiers section | ||
Stanza | intersection_of |
| Processed the same way that OWL intersection operator is processed. This includes creation of anonymous sets. | ||
Stanza | union_of |
| Same as OWL | ||
Stanza | disjoint_from |
| Same as OWL | ||
Stanza | relationship | associations. |
| ||
Stanza | relationship.not_necessary | associations..associationQualifier |
| ||
Stanza | relationship.inverse_necessary | associations..associationQualifier |
| ||
Stanza | relationship.namespace |
| If present, the supplied namespace becomes the owning "codingScheme". | ||
Stanza | relationship.derived | associations..associationQualifier |
| ||
Stanza | relationship.cardinality | associations..associationQualifier |
| ||
Stanza | relationship.maxCardinality | associations..associationQualifier |
| ||
Stanza | relationship.minCardinality | associations..associationQualifier |
| ||
Stanza | is_obsolete | codedEntry.isActive = false |
| ||
Stanza | replaced_by |
|
| ||
Stanza | consider |
| Not Mapped | ||
Stanza | use_term |
| (deprecated) | ||
dbxref | dbxref name | CodedEntry..source |
| ||
| supportedSource |
| dbxref name format is inconsistent. In most cases, it can be the localName of supportedSource, but special processing may be necessary in the case of URL's, etc | ||
dbxref | dbxref description |
| Not mapped. | ||
dbxref | trailing modifiers |
| Not mapped. | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="13d615c2b0991fb9-1fb4a8f4-41914b63-8febae8c-479dacca74b0304ba3863e75"><ac:plain-text-body><![CDATA[ | typeDef Stanza | domain | associations.['has_domain'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="7dd2d3164271ceed-0ff84c57-479946b4-aa89b4c3-746776efc5b0ae11092e7892"><ac:plain-text-body><![CDATA[ | typeDef Stanza | range | associations.['has_range'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="703e4b1999592dba-2f606883-4ce848f9-915591ab-a7281a9e18d4b924d52d9d0a"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_cyclic | property['is_cyclic'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="9a7d6f1bd30a992c-2163fa2a-44eb4afb-b80887bf-7cfa97cd53e6f8eb8d150508"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_reflexive | property['is_reflexive'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isReflexive |
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="1ede5afe09164e3d-b659a6ce-4bbf48ed-90979f3e-57bca07c691c8491fe02df98"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_symmetric | property['is_symmetric'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isSymmetric |
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="da693208396e79fe-7facd3f9-45b04233-9ffb870f-fa0ea45017af2e2b2779e12f"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_transitive | property['is_transitive'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isTransitive |
| ||
typeDef Stanza | inverse_of | association.inverse |
| ||
instance stanza | id | same rules as general stanza | same rules as general stanza | ||
instance stanza | name | same rules as general stanza | same rules as general stanza | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="5dd7d1047d52497d-de8a279d-4d1c4d74-b554b065-f6e6ae4b9f680f8fc4cd8ec6"><ac:plain-text-body><![CDATA[ | instance stanza | instance_of | association['has_instance'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
instance stanza |
| CodedEntry.property.property="" | data type properties go in Coded Entry property section |
...
HL7 Table | HL7 Column | LexGrid Model Element | Notes | Intentionally Not mapped | Outstanding issues | ||
---|---|---|---|---|---|---|---|
Model | <modelID> | <codingSchemeName> |
|
|
| ||
| <name> | <formalName> |
|
|
| ||
| <registeredName> |
|
|
|
| ||
| <defaultLanguage> | en* |
|
|
| ||
| <versionNumber> | <representsVersion> |
|
|
| ||
| <isNative> | 0* |
|
|
| ||
| <approximateNumberofConcepts> | Result of count on concept bearing table? |
|
|
| ||
| <firstRelease> | MISSING |
|
|
| ||
| <modifiedRelease> | MISSING |
|
|
| ||
| <deprecated> | MISSING |
|
|
| ||
| <description> | <entityDescription> |
|
|
| ||
| <copyright> | MISSING |
|
|
| ||
VCS_code_system | codeSystemId | codingScheme.registeredName | Moved to metadata file. |
|
| ||
| codeSystemType | commonTypes::Properties | This is an HL7 specific code system property to distinguish internal vs external code systems. Moved to metadata file. |
|
| ||
| codeSystemName | concept.conceptCode | Moved to metadata file. |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="579281dd9601f006-f0d8fd79-4ef34c35-9a8caa70-20ff59f641692949900ec4b4"><ac:plain-text-body><![CDATA[ |
| codeSystemName | concept.presentation['textualPresentation'].text |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| fullName | codingScheme.formalName |
|
|
| ||
| description | codingScheme.entityDescription | Moved to metadata file. |
|
| ||
| releaseId | codingScheme.representsVersion | Moved to metadata file. |
|
| ||
| copyrightNotice | codingScheme.copyright | Moved to metadata file. |
|
| ||
| literal('en') | codingScheme.defaultLanguage | Moved to metadata file. |
|
| ||
VCS_concept_code_xref | internalId |
|
|
|
| ||
| Concept Code | concept.conceptCode |
| RIM db column conceptCode2 |
| ||
| Case Difference | commonTypes::Properties | Basically a property to outline whether there are case differences in the Concept Code or not (mainly used, but not restricted tor units of measure) | RIM db column codeInstance |
| ||
| Status | concept.isActive=(conceptStatus=='A'?) |
| RIM db column conceptStatus |
| ||
|
| concept.conceptStatus | Not used by HL7. A = isActive, R = retired |
|
| ||
VCS_concept_designation | internalId |
| foreign key |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="9d31336b733f848d-4edda9ec-42854282-a2c58c15-c626decc4cb9257b04247652"><ac:plain-text-body><![CDATA[ |
| designation | concept.presentation['textualPresentation'].text |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| designationSeq |
|
|
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="1f30b3cb34d02733-38ab2b12-4da940fa-ab7abb67-e744eef9bbc960919395a5c3"><ac:plain-text-body><![CDATA[ |
| language | concept.presentation['textualPresentation'].language | Can be omitted if language = default language |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="c2de623b9f772689-adf83a74-4e5d46f2-951291d3-8f145c4590a3ad02658fb3ea"><ac:plain-text-body><![CDATA[ |
| preferredForLanguage | concept.presentation['textualPresentation'].isPreferred |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="bf86a3889fcceaad-a390d6c4-48f8485c-9e8dbf14-66d8ef2e888d8238f22d26b7"><ac:plain-text-body><![CDATA[ | VCS_concept_description | internalId | with(codeSystem[deref(internalId)].concept[deref(internalId)]).definition | foreign key |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="1b3fe73298cc784a-33bada23-4e854276-bba1aaad-d679a9f3b34062397b3f0256"><ac:plain-text-body><![CDATA[ |
| description | concept.presentation['textualPresentation'].text |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ccd394f6955be87f-4b754a6e-47304b84-89768c6a-856151c0b2f33c0cbaaf5dc4"><ac:plain-text-body><![CDATA[ |
| language | concept.presentation['textualPresentation'].language |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="156ef3195b366534-ea058fe8-4716419d-a899ae96-3f5745fc5a2393e8cdb5189b"><ac:plain-text-body><![CDATA[ |
| literal('true') | concept.presentation['textualPresentation'].isPreferred |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ba76515091b423c3-c4a64be5-4fd14ab1-bae497ba-7b3722d21546a97ec350daef"><ac:plain-text-body><![CDATA[ |
| uniqueId() | concept.presentation['textualPresentation'].propertyId |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ea04584159519f76-770dda29-4e6f44f9-916bad9c-b9aaa999be60cdd28eae3b60"><ac:plain-text-body><![CDATA[ |
| literal('definition') | concept.presentation['textualPresentation'].property |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
VCS_concept_property | internalId |
| foreign key |
|
| ||
| propertyCode | concept.property.property |
|
|
| ||
| propertySeq |
| Currently not used by HL7 |
|
| ||
| propertyValue | concept.property.text |
|
|
| ||
| language | concept.property.language |
|
|
| ||
VCS_concept_relationship | relationCode | association.association |
|
|
| ||
| sourceInternalId | associationInstance.sourceConcept |
|
|
| ||
| targetInternalId | associationTarget.targetConcept |
|
|
| ||
Model | modelID | systemRelease.releaseId |
|
|
| ||
| name | service.service |
|
|
| ||
| versionNumber | service.version |
|
|
| ||
| lastModifiedDate | systemRelease.releaseDate |
|
|
| ||
| developingOrganization | systemRelease.releaseAgency |
|
|
| ||
| committeeID |
|
|
|
| ||
| description | systemRelease.entityDescription |
|
|
| ||
| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) | systemRelease.releaseURN |
|
|
| ||
| literal('true') | systemRelease.isLatest | Also have to set the prior release isLatest to false |
|
| ||
| preceding-sibling/releaseOrder + 1 | systemRelease.releaseOrder |
|
|
| ||
Model | modelID | commonTypes::Properties |
|
|
| ||
(Special mapping for NCI) | name | codingScheme.localName |
|
|
| ||
| versionNumber | codingScheme.representsVersion |
|
|
| ||
| lastModifiedDate | commonTypes::Properties |
|
|
| ||
| developingOrganization | commonTypes::Properties |
|
|
| ||
| committeeID |
|
|
|
| ||
| description | codingScheme.entityDescription |
|
|
| ||
| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) | codingScheme.registeredName |
|
|
| ||
| literal('true') | commonTypes::Properties | Also have to set the prior release isLatest to false |
|
| ||
| preceding-sibling/releaseOrder + 1 | commonTypes::Properties |
|
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="bd49c9d102628878-97052a25-4c4c49fe-b9d0b0b5-cd9379424d653a7c50d5f8fc"><ac:plain-text-body><![CDATA[ | RIM_vocabulary_domain | vocDomain | codingscheme["VocabularyDomain"].concept.conceptCode | Vocabulary Domains are carried in a code system of vocabulary domains. |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="e0cba52a02a1e208-9c691f7a-43384f8f-b4a2ab5a-61a10ce62e957ff8ca3bb243"><ac:plain-text-body><![CDATA[ |
|
| codingscheme["VocabularyDomain"].concept.presentation["textualPresentation"].text | preferredPresentation |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ae775c0a71fb7264-894adf0d-489e46a2-8e8abf2c-73caf239157ca70fa70a4c67"><ac:plain-text-body><![CDATA[ |
| description | codingscheme["VocabularyDomain"].concept.definition.text | preferredDefinition for code |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="1d1f3045ca7ac818-0c05bc39-41794922-b29093d6-1742af86bfec4f76e494d63c"><ac:plain-text-body><![CDATA[ |
| restrictsDomain | codingscheme["VocabularyDomain"].association["hasSubtype"].sourceConcept | Should this be hasSubtype or something else? |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ed567474e9d20091-7e7dcc5f-40204213-893ca77b-725ba8ce568c8ae1c56984fa"><ac:plain-text-body><![CDATA[ |
|
| codingscheme["VocabularyDomain"].association["hasSubtype"].targetconcept = vocDomain |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="590383f7cffab6f7-204beee6-4cef4114-81f79847-f637cb13bea704a8290d7931"><ac:plain-text-body><![CDATA[ | VOC_code_reference | usedToBuildValueSet | with(valueDomain[registeredName=current()/.]) |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| referencesConceptCode | ...valueDomainEntry/conceptCode | 1) id is synthesized |
|
| ||
| referencesInternalId |
| Internal id's aren't exposed in lexGrid |
|
| ||
| relationship | ...valueDomainEntry/includeChildren = (relationship == 'hasSubtype') | Won't deal w/ non-hasSubtype relationships, but HL7 doesn't have any. |
|
| ||
| includeReferencedCode | ...valueDomainEntry/isSelectable |
| Not in current implementation |
| ||
| leafOnly |
| Not used in HL7 Model |
|
| ||
| directChildrenOnly |
| Not used in HL7 Model |
|
| ||
| isHeadCode |
| Only used when referenced in VOC_value_set_constructor. |
|
| ||
| referencesCodeSystem | .../valueDomainEntry.codingScheme | Shortcut in HL7 model. Must = VOC_value_set.basedOnCodeSystem |
|
| ||
| arbitraryUniqueValue() | .../valueDomainEntry.id |
|
|
| ||
VOC_registered_code_system | codeSystemId |
| VOC_registered_code_system isn't currently transferred to Lexgrid |
|
| ||
| sponsor |
|
|
|
| ||
| publisher |
|
|
|
| ||
| versionReportingMethod |
|
|
|
| ||
| licensingInformation |
| This field should really be transfer to copyright? |
|
| ||
| inUMLS |
|
|
|
| ||
| systemSpecificLocatorInfo |
|
|
|
| ||
| uri |
|
|
|
| ||
| isExternal |
|
|
|
| ||
VOC_value_set | valueSetId | valueDomain.registeredName |
|
|
| ||
| valueSetName | valueDomain.valueDomain | Name is the key in LexGrid, and is optional in HL7 - will need to be addressed. |
|
| ||
| basedOnCodeSystem | valueDomain.defaultCodingScheme | Optional in HL7, required in LexGrid. |
|
| ||
| description | valueDomain.entityDescription |
|
|
| ||
| definingExpression |
| Not used. |
|
| ||
| allCodes |
|
|
|
| ||
| isTaxonomicSet |
| No mapping available |
|
| ||
| valueSetAuthority |
| Included in valueSetID |
|
| ||
| valueSetNumber |
|
|
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="9aa8b2de612046ea-b5d64290-4c064312-ac82b65a-a447d5e3d04fac64c247054f"><ac:plain-text-body><![CDATA[ | VOC_value_set_constructor | usedToBuildValueSet | new valueDomainEntry(parent = valueDomain[valueSetId=current()/.],id=unique()) |
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| includesOrExcludesSet | valueDomainEntry.includesValueDomain |
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| includeHeadCode | valueDomainEntry.isSelectable |
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<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="5c62010c4e40ae07-abdecceb-4c73419b-9b7588f6-d0355979360ab605d013c4ce"><ac:plain-text-body><![CDATA[ |
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| valueDomainEntry.conceptCode = VOC_code_reference[usedToBuildValueSet=current().usedToBuildValueSet and isHeadCode=true].referencesConceptCode | Assumes that there always is a head code. |
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VOC_vocabulary_domain_value_set | representsVocDomain | (selector) |
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<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0a419b46f8621bf9-43630f4a-4f754718-a0b790ee-f19c3fa1b5c5943bea21d17f"><ac:plain-text-body><![CDATA[ |
| definedByValueSet | codingscheme['VocabularyDomain'].concept[representsVocDomain].property['definedByValueSet'].text | have to get 'representsVocDomain' into supportedProperty header |
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<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="a64edd4d4f166301-9225b3d1-4bf94543-be1c9fd6-f1c442da343d7e557c949636"><ac:plain-text-body><![CDATA[ |
| appliesInContext | codingscheme['VocabularyDomain'].concept[representsVocDomain].property['definedByValueSet'].usageContext | Have to get all the contexts in the VocabularyDomain supportedContext header |
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VCS_release_version | releaseId | codingSchemeVersion.version | Note: this is not the way that things are done at the moment. At the moment, VCS_release_versions are loaded into systemRelease. Entered if one or more concept/relationship change. |
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| valueDomainVersion.version | Set iff one or more value sets change |
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| literal("false") | codingSchemeVersion.isComplete | All versions are delta's in this model |
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| releaseAgency |
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| releaseDate | codingSchemeVersion.versionDate |
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| description | codingSchemeVersion.entityDescription |
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| valueDomainVersion.entityDescription |
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| editorID |
| There is no place for these currently. |
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| forWhomID |
| There is no place for these currently. |
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| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) |
| This corresponds to the containing system release when the sytem release occurs. It is empty until then. |
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Source Definition |
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| <codingSchemeName> | <codingSchemeId> | <defaultLanguage> | <formalName> | version |
| description | copyright | This must be the first line. It contains the coding scheme metadata. | |||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="55d8632b3bf7f1a5-2bb0cfe5-4bb84b5a-a170ade3-5d95f49f8a0c96683f694bfe"><ac:plain-text-body><![CDATA[ |
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| [<code>] | <name> | description |
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| Beginning of concepts in coding scheme. | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="5564fa6e874ef2c0-b878eef4-41354d40-b49f8e91-a8483e7d60afce5601aa88d9"><ac:plain-text-body><![CDATA[ |
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| [<code>] | <name> | description |
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| Represent hierarchical 'hasSubtype' relationship nesting (name hasSubtype name) | ]]></ac:plain-text-body></ac:structured-macro> |
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