Page History
...
OBO Class | OBO Entity | LexGrid Model Element | Notes | ||
---|---|---|---|---|---|
Document Header | format-version |
| Not mapped. | ||
Document Header | data-version | CodingScheme.representsVersion | Creates a codingSchemeVersion and SystemRelease record. If not specified, then hard coded "UNASSIGNED" | ||
Document Header | version | CodingScheme.representsVersion | Deprecated - use data-version if present. | ||
Document Header | date |
| Not mapped. | ||
Document Header | saved-by |
| Ignored but included if contained in the remark entity. | ||
Document Header | auto-generated-by |
| Ignored but included if contained in the remark entity. | ||
Document Header | subsetdef |
| Not mapped. | ||
Document Header | import |
| Deprecated - Imports are used to assemble a larger document from smaller. | ||
Document Header | typeref |
| Deprecated. | ||
Document Header | synonymtypedef |
| Not mapped. | ||
Document Header | idspace |
| Not mapped.The idspace is a triple - localName, URN and description. | ||
Document Header | default-relationship-id-prefix |
| Not mapped. | ||
Document Header | id-mapping | CodingScheme.supportedAssociation | This is more generalized than the LexGrid model, as it supports mapping between any id's. Note that its primary purpose, however, is to handle supportedAssociation. | ||
Document Header | remark | CodingScheme.entityDescription | Will combine multiple remark entities into the entityDescription. | ||
Document Header | default-namespace | codingScheme.codingScheme | Will use default-namespace if provided; otherwise will use filename without the extension. | ||
Document Header | default-namespace | codingScheme.formalName | Will use default-namespace if provided; otherwise will use filename without the extension. | ||
Document Header | default-namespace | codingScheme.registeredName | Combination of "urn:lsid:bioontology.org:" and if provided, the value in "default-namespace"; but if not will use filename without the extension. | ||
|
| codingScheme.defaultLanguage | Hardcoded "en" | ||
|
| codingScheme.isNative | Hardcoded "true" | ||
Stanza | id | CodedEntry.conceptCode |
| ||
Stanza | name | CodedEntry.entityDescription |
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="02f3742edf722931-36b2f46c-4d7b47bb-80dcaa54-b167d75c7da9a265c905dee9"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.presentation['textualPresentation'].text |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="18971876f7395eee-405c8137-41394f3c-a848a7a8-6a15565e3d9173f2e4695d9e"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.presentation['textualPresentation'].isPreferred = true |
| ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | alt_id |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="1bcdfacb9d6613bf-0c754c59-4eb745ec-91799102-9bbc4bf9979742ab5f1d27f8"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.property['alt_id'].propertyId |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="a923d5930f2d3772-702be7ec-41644975-9a6fa28d-455437bb09c1842e1c8f6b4c"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.property['alt_id'].text |
| ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | is_anonymous | CodedEntry.isAnonymous = true |
| ||
Stanza | is_obsolete | CodedEntry.isActive = false |
| ||
Stanza | def | CodedEntry.definition |
| ||
|
| CodedEntry.definition.isPreferred = true |
| ||
Stanza | def.dbxref |
| See dbxref | ||
Stanza | comment | CodedEntry.comment.text |
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="112e83c6dbcf4270-35e33fe9-42234901-9db0b28c-58e8e6a1acc8c0b8c5af1250"><ac:plain-text-body><![CDATA[ | Stanza | subset | property[subset tag] | See subsetdef | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="103f92445ebcf47f-6f509a6f-431d4a1b-9a699758-ef36931b67ecdaaa4acf5cad"><ac:plain-text-body><![CDATA[ | Stanza | synonym | presentation['textualPresentation'].text |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0ab1e0a56ac214e9-082a8fd2-47554a5b-800fb3db-6e2ffdf834e44713edf9708c"><ac:plain-text-body><![CDATA[ | Stanza | synonym.scope | presentation['textualPresentation'].degreeOfFidelity |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="3716e52b4d0ff489-c2c15e6c-44a34a18-b4559d7c-f885d7ce7d2f58470cce61c2"><ac:plain-text-body><![CDATA[ | Stanza | synonym.type | presentation['textualPresentation'].representationalForm |
| ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | synonym.dbxref |
| (see dbxref) | ||
Stanza | exact_synonym |
| See synonym | ||
Stanza | narrow_synonym |
| See synonym | ||
Stanza | broad_synonym |
| See synonym | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ff508a7ad5552e97-2e9be973-4703487a-af03831d-5cf43f77ffb58aeb5573d830"><ac:plain-text-body><![CDATA[ | Stanza | xref | associations.['mapsTo'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | xref_analog |
| See synonym | ||
Stanza | xref_unk |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="80a45eeefe8033ce-a4626772-42614e96-8cc78515-2389596fd249a40f3e5e4b36"><ac:plain-text-body><![CDATA[ | Stanza | is_a | associations.['hasSubtype'] | Reverse of the source and target. | ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | is_a.namespace |
| If present, the supplied namespace becomes the owning "codingScheme". | ||
Stanza | is_a.derived | associations.hasSubtype.associationQualifier | If present, need to include derived in the supportedAssociationQualifiers section | ||
Stanza | intersection_of |
| Processed the same way that OWL intersection operator is processed. This includes creation of anonymous sets. | ||
Stanza | union_of |
| Same as OWL | ||
Stanza | disjoint_from |
| Same as OWL | ||
Stanza | relationship | associations. |
| ||
Stanza | relationship.not_necessary | associations..associationQualifier |
| ||
Stanza | relationship.inverse_necessary | associations..associationQualifier |
| ||
Stanza | relationship.namespace |
| If present, the supplied namespace becomes the owning "codingScheme". | ||
Stanza | relationship.derived | associations..associationQualifier |
| ||
Stanza | relationship.cardinality | associations..associationQualifier |
| ||
Stanza | relationship.maxCardinality | associations..associationQualifier |
| ||
Stanza | relationship.minCardinality | associations..associationQualifier |
| ||
Stanza | is_obsolete | codedEntry.isActive = false |
| ||
Stanza | replaced_by |
|
| ||
Stanza | consider |
| Not Mapped | ||
Stanza | use_term |
| (deprecated) | ||
dbxref | dbxref name | CodedEntry..source |
| ||
| supportedSource |
| dbxref name format is inconsistent. In most cases, it can be the localName of supportedSource, but special processing may be necessary in the case of URL's, etc | ||
dbxref | dbxref description |
| Not mapped. | ||
dbxref | trailing modifiers |
| Not mapped. | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="90e954350ba65852-36250b85-45a84085-8d72b6f7-1ad07d0df7f15203ee4d3847"><ac:plain-text-body><![CDATA[ | typeDef Stanza | domain | associations.['has_domain'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="4bc232ceb42eb22d-b81ecf4a-4b244e8f-aa3e9867-aa596afaee20c7318377ab42"><ac:plain-text-body><![CDATA[ | typeDef Stanza | range | associations.['has_range'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="f05317d2b633a00e-b562c85d-4dcb41d2-a3deb64f-043276fbb7bb3a3aa554094b"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_cyclic | property['is_cyclic'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6c5a7cf08dc81b88-19f42642-41ab426b-ac389032-3cabc0db29ca86c221ff66a5"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_reflexive | property['is_reflexive'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isReflexive |
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="32f3a38c9bf36095-090f9bc9-4ec04434-9ffdae42-3be603605f20083cfd4a167c"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_symmetric | property['is_symmetric'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isSymmetric |
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="3c45110db26a4400-952c7075-4eaa4fd1-9d919edf-60c9d73bf2be1e652adfe944"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_transitive | property['is_transitive'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isTransitive |
| ||
typeDef Stanza | inverse_of | association.inverse |
| ||
instance stanza | id | same rules as general stanza | same rules as general stanza | ||
instance stanza | name | same rules as general stanza | same rules as general stanza | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="a10086d892235a03-f3a71bdf-47c44235-98db9484-10b1ad3f1159447012b344c8"><ac:plain-text-body><![CDATA[ | instance stanza | instance_of | association['has_instance'] |
| ]]></ac:plain-text-body></ac:structured-macro> |
instance stanza |
| CodedEntry.property.property="" | data type properties go in Coded Entry property section |
...
HL7 Table | HL7 Column | LexGrid Model Element | Notes | Intentionally Not mapped | Outstanding issues | ||
---|---|---|---|---|---|---|---|
Model | <modelID> | <codingSchemeName> |
|
|
| ||
| <name> | <formalName> |
|
|
| ||
| <registeredName> |
|
|
|
| ||
| <defaultLanguage> | en* |
|
|
| ||
| <versionNumber> | <representsVersion> |
|
|
| ||
| <isNative> | 0* |
|
|
| ||
| <approximateNumberofConcepts> | Result of count on concept bearing table? |
|
|
| ||
| <firstRelease> | MISSING |
|
|
| ||
| <modifiedRelease> | MISSING |
|
|
| ||
| <deprecated> | MISSING |
|
|
| ||
| <description> | <entityDescription> |
|
|
| ||
| <copyright> | MISSING |
|
|
| ||
VCS_code_system | codeSystemId | codingScheme.registeredName | Moved to metadata file. |
|
| ||
| codeSystemType | commonTypes::Properties | This is an HL7 specific code system property to distinguish internal vs external code systems. Moved to metadata file. |
|
| ||
| codeSystemName | concept.conceptCode | Moved to metadata file. |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="65be9818ac468637-a71aee70-498e4441-bc36b6f8-21c6904f916a93dfe036e917"><ac:plain-text-body><![CDATA[ |
| codeSystemName | concept.presentation['textualPresentation'].text |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| fullName | codingScheme.formalName |
|
|
| ||
| description | codingScheme.entityDescription | Moved to metadata file. |
|
| ||
| releaseId | codingScheme.representsVersion | Moved to metadata file. |
|
| ||
| copyrightNotice | codingScheme.copyright | Moved to metadata file. |
|
| ||
| literal('en') | codingScheme.defaultLanguage | Moved to metadata file. |
|
| ||
VCS_concept_code_xref | internalId |
|
|
|
| ||
| Concept Code | concept.conceptCode |
| RIM db column conceptCode2 |
| ||
| Case Difference | commonTypes::Properties | Basically a property to outline whether there are case differences in the Concept Code or not (mainly used, but not restricted tor units of measure) | RIM db column codeInstance |
| ||
| Status | concept.isActive=(conceptStatus=='A'?) |
| RIM db column conceptStatus |
| ||
|
| concept.conceptStatus | Not used by HL7. A = isActive, R = retired |
|
| ||
VCS_concept_designation | internalId |
| foreign key |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="cfe5372c212b05f1-a49d6285-44e443e5-bd0da2bd-969c604a7b0eecf766a37554"><ac:plain-text-body><![CDATA[ |
| designation | concept.presentation['textualPresentation'].text |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| designationSeq |
|
|
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="83981c47424d1f7a-a63b312b-4fa0459e-8d8b88c8-1ac12c50525b7c9e9e6b1ab1"><ac:plain-text-body><![CDATA[ |
| language | concept.presentation['textualPresentation'].language | Can be omitted if language = default language |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="7ffdfbed0c20a359-3cb5a2e5-47d442e2-9cecb215-3d62079e194c09887e6d37b0"><ac:plain-text-body><![CDATA[ |
| preferredForLanguage | concept.presentation['textualPresentation'].isPreferred |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="b670ca39cd66c7d6-2b5ef2c6-49844ebe-bbc3b099-b2ca2e1fb92566d278dcadc9"><ac:plain-text-body><![CDATA[ | VCS_concept_description | internalId | with(codeSystem[deref(internalId)].concept[deref(internalId)]).definition | foreign key |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="855a8408079b9743-c97eaba6-4f1e48f5-b5ad9a33-08bf7e2c1127f4f4a84fd4d5"><ac:plain-text-body><![CDATA[ |
| description | concept.presentation['textualPresentation'].text |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0c793ed561a1e626-879e1dd1-4e3c48bf-91f387cc-784705fa42a2f076af0ba5cc"><ac:plain-text-body><![CDATA[ |
| language | concept.presentation['textualPresentation'].language |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="75d4c077acae8e97-ed82c2a5-416d458e-91a79628-e526c23786d5db82dce84e10"><ac:plain-text-body><![CDATA[ |
| literal('true') | concept.presentation['textualPresentation'].isPreferred |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="3118dfc0cfb87bda-d5d5aaa2-4fae45b0-9035b302-e8f97537be994754750c50b1"><ac:plain-text-body><![CDATA[ |
| uniqueId() | concept.presentation['textualPresentation'].propertyId |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0bfc5e0edce7ec90-0796ed89-45b84470-85f3ab40-bbe62ba50099bb3d0cf89a95"><ac:plain-text-body><![CDATA[ |
| literal('definition') | concept.presentation['textualPresentation'].property |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
VCS_concept_property | internalId |
| foreign key |
|
| ||
| propertyCode | concept.property.property |
|
|
| ||
| propertySeq |
| Currently not used by HL7 |
|
| ||
| propertyValue | concept.property.text |
|
|
| ||
| language | concept.property.language |
|
|
| ||
VCS_concept_relationship | relationCode | association.association |
|
|
| ||
| sourceInternalId | associationInstance.sourceConcept |
|
|
| ||
| targetInternalId | associationTarget.targetConcept |
|
|
| ||
Model | modelID | systemRelease.releaseId |
|
|
| ||
| name | service.service |
|
|
| ||
| versionNumber | service.version |
|
|
| ||
| lastModifiedDate | systemRelease.releaseDate |
|
|
| ||
| developingOrganization | systemRelease.releaseAgency |
|
|
| ||
| committeeID |
|
|
|
| ||
| description | systemRelease.entityDescription |
|
|
| ||
| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) | systemRelease.releaseURN |
|
|
| ||
| literal('true') | systemRelease.isLatest | Also have to set the prior release isLatest to false |
|
| ||
| preceding-sibling/releaseOrder + 1 | systemRelease.releaseOrder |
|
|
| ||
Model | modelID | commonTypes::Properties |
|
|
| ||
(Special mapping for NCI) | name | codingScheme.localName |
|
|
| ||
| versionNumber | codingScheme.representsVersion |
|
|
| ||
| lastModifiedDate | commonTypes::Properties |
|
|
| ||
| developingOrganization | commonTypes::Properties |
|
|
| ||
| committeeID |
|
|
|
| ||
| description | codingScheme.entityDescription |
|
|
| ||
| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) | codingScheme.registeredName |
|
|
| ||
| literal('true') | commonTypes::Properties | Also have to set the prior release isLatest to false |
|
| ||
| preceding-sibling/releaseOrder + 1 | commonTypes::Properties |
|
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="76fb6b34cd73bc6c-a32abde6-4a2c4f75-8ea38457-668879192cc9ffb25fa384f7"><ac:plain-text-body><![CDATA[ | RIM_vocabulary_domain | vocDomain | codingscheme["VocabularyDomain"].concept.conceptCode | Vocabulary Domains are carried in a code system of vocabulary domains. |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="4d92dded1fb748fb-89853d4e-4e174fee-b83db664-337d644925adfd4738819920"><ac:plain-text-body><![CDATA[ |
|
| codingscheme["VocabularyDomain"].concept.presentation["textualPresentation"].text | preferredPresentation |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="cda048b5bba5824e-78b146f0-48194429-92a0a37b-fdaa0374300fbd81857ee641"><ac:plain-text-body><![CDATA[ |
| description | codingscheme["VocabularyDomain"].concept.definition.text | preferredDefinition for code |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0cdcc4de0c72fe8e-bdf86a92-4f0344d8-a07aa181-6dee4aa5d37d2b80f73d20c2"><ac:plain-text-body><![CDATA[ |
| restrictsDomain | codingscheme["VocabularyDomain"].association["hasSubtype"].sourceConcept | Should this be hasSubtype or something else? |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6b47291acc7b0f34-d7b1a57d-41f04553-a94c9a64-fb39469d35de3f22dc73d887"><ac:plain-text-body><![CDATA[ |
|
| codingscheme["VocabularyDomain"].association["hasSubtype"].targetconcept = vocDomain |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="76c3a2239592d3e7-9eaa3277-4073418b-bcc38032-628ab89fefdba5b2d811959d"><ac:plain-text-body><![CDATA[ | VOC_code_reference | usedToBuildValueSet | with(valueDomain[registeredName=current()/.]) |
|
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| referencesConceptCode | ...valueDomainEntry/conceptCode | 1) id is synthesized |
|
| ||
| referencesInternalId |
| Internal id's aren't exposed in lexGrid |
|
| ||
| relationship | ...valueDomainEntry/includeChildren = (relationship == 'hasSubtype') | Won't deal w/ non-hasSubtype relationships, but HL7 doesn't have any. |
|
| ||
| includeReferencedCode | ...valueDomainEntry/isSelectable |
| Not in current implementation |
| ||
| leafOnly |
| Not used in HL7 Model |
|
| ||
| directChildrenOnly |
| Not used in HL7 Model |
|
| ||
| isHeadCode |
| Only used when referenced in VOC_value_set_constructor. |
|
| ||
| referencesCodeSystem | .../valueDomainEntry.codingScheme | Shortcut in HL7 model. Must = VOC_value_set.basedOnCodeSystem |
|
| ||
| arbitraryUniqueValue() | .../valueDomainEntry.id |
|
|
| ||
VOC_registered_code_system | codeSystemId |
| VOC_registered_code_system isn't currently transferred to Lexgrid |
|
| ||
| sponsor |
|
|
|
| ||
| publisher |
|
|
|
| ||
| versionReportingMethod |
|
|
|
| ||
| licensingInformation |
| This field should really be transfer to copyright? |
|
| ||
| inUMLS |
|
|
|
| ||
| systemSpecificLocatorInfo |
|
|
|
| ||
| uri |
|
|
|
| ||
| isExternal |
|
|
|
| ||
VOC_value_set | valueSetId | valueDomain.registeredName |
|
|
| ||
| valueSetName | valueDomain.valueDomain | Name is the key in LexGrid, and is optional in HL7 - will need to be addressed. |
|
| ||
| basedOnCodeSystem | valueDomain.defaultCodingScheme | Optional in HL7, required in LexGrid. |
|
| ||
| description | valueDomain.entityDescription |
|
|
| ||
| definingExpression |
| Not used. |
|
| ||
| allCodes |
|
|
|
| ||
| isTaxonomicSet |
| No mapping available |
|
| ||
| valueSetAuthority |
| Included in valueSetID |
|
| ||
| valueSetNumber |
|
|
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="a77972ceaede9433-df52616e-4cb64727-b48a8eb3-87d7fc7127e76fc769e7af1d"><ac:plain-text-body><![CDATA[ | VOC_value_set_constructor | usedToBuildValueSet | new valueDomainEntry(parent = valueDomain[valueSetId=current()/.],id=unique()) |
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| includesOrExcludesSet | valueDomainEntry.includesValueDomain |
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| includeHeadCode | valueDomainEntry.isSelectable |
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<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="881777cc524e9fbc-0b90899e-4f114736-9e149e53-7929640d8ef6cded9622181e"><ac:plain-text-body><![CDATA[ |
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VOC_vocabulary_domain_value_set | representsVocDomain | (selector) |
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<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="287e8da96bd21221-588959c5-4e574556-94528250-d3d11897d7a8c03f4956ed04"><ac:plain-text-body><![CDATA[ |
| definedByValueSet | codingscheme['VocabularyDomain'].concept[representsVocDomain].property['definedByValueSet'].text | have to get 'representsVocDomain' into supportedProperty header |
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<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="d8d7135b07ba17e7-29d079c9-4b394888-91e68402-d1912d1fdbb69a001c0f6169"><ac:plain-text-body><![CDATA[ |
| appliesInContext | codingscheme['VocabularyDomain'].concept[representsVocDomain].property['definedByValueSet'].usageContext | Have to get all the contexts in the VocabularyDomain supportedContext header |
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VCS_release_version | releaseId | codingSchemeVersion.version | Note: this is not the way that things are done at the moment. At the moment, VCS_release_versions are loaded into systemRelease. Entered if one or more concept/relationship change. |
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| valueDomainVersion.version | Set iff one or more value sets change |
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| literal("false") | codingSchemeVersion.isComplete | All versions are delta's in this model |
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| releaseAgency |
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| releaseDate | codingSchemeVersion.versionDate |
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| description | codingSchemeVersion.entityDescription |
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| valueDomainVersion.entityDescription |
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| editorID |
| There is no place for these currently. |
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| forWhomID |
| There is no place for these currently. |
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| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) |
| This corresponds to the containing system release when the sytem release occurs. It is empty until then. |
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...
Source Definition |
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| Column | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 |
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Line | 1 |
| <codingSchemeName> | <codingSchemeId> | <defaultLanguage> | <formalName> | version |
| description | copyright | This must be the first line. It contains the coding scheme metadata. | ||||||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="16cb200bf76ed195-b1094bb0-4a3b471d-91909481-fa9ee5c6528e4cb062e5af3f"><ac:plain-text-body><![CDATA[ |
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| [<code>] | <name> | description |
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| Beginning of concepts in coding scheme. | ]]></ac:plain-text-body></ac:structured-macro> | |||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="71d869a5f091c44f-cbc79618-455a45b0-8472b9a9-1efb08f1fdc28ce4f0d563ee"><ac:plain-text-body><![CDATA[ |
| 3 |
| [<code>] | <name> | description |
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| Represent hierarchical 'hasSubtype' relationship nesting (name hasSubtype name) | ]]></ac:plain-text-body></ac:structured-macro> |
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Text Element | LexGrid | Comments |
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Coding Scheme |
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codingSchemeName | codingScheme.codingSchemeName |
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codingSchemeId | codingScheme.codingSchemeId |
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defaultLanguage | codingScheme.defaultLanguage |
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formalName | codingScheme.formalName |
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| version | codingScheme.representsVersion | Optional |
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source | codingScheme.source | Optional |
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description | codingScheme.entityDescription | Optional |
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copyright | codingScheme.copyright | Optional | ||||||
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| Concepts |
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code | concept.conceptCode | Optional | ||||||
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| name | concept.conceptName |
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description | concept.entityDescription |
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...