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Page History
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OWL Element | LexEVS | Comments |
|---|---|---|
OWL: RDF Schema Features | LexEVS | Comments |
owl:ontology | codingScheme | No comments |
xml:lang | codingScheme.defaultLanguage | Default is 'en' |
dc:title | codingScheme.formalName | No comments |
rdfs:label | codingScheme.localName | No comments |
URI | codingScheme.registeredName | No comments |
owl:versionInfo | codingScheme.representsVersion | Default is 'UNASSIGNED' |
dc:rights | codingScheme.copyright | No comments |
owl:Class (Thing, Nothing) | concept | No comments |
rdf:ID | concept.conceptCode | No comments – |
rdf:ID | concept.isActive | Hard coded as "Active" |
– rdf:ID | concept.isAnonymous | No comments – |
rdf:ID | concept.isDefined | No comments |
rsfs:label | concept.entityDescription | No comments |
rdf:comment | concept.comment | No comments |
rdfs:subClassOf | association | No comments – |
rdfs:subClassOf | association.id = "subClassOf" | No comments – |
rdfs:subClassOf | association.forwardName = "subClassOf" | No comments – |
rdfs:subClassOf | association.isFunctional = "false" | No comments – |
rdfs:subClassOf | association.isNavigable = "true" | No comments – |
rdfs:subClassOf | association.isReflexive="true" | No comments – |
rdfs:subClassOf | association.isSymmetric="false" | No comments – |
rdfs:subClassOf | association.isTransitive="true" | No comments |
rdf:Property (ObjectProperty) | association | An association between two classes (domain, range) |
rdf:Property (DatatypeProperty) | association | An association between one class (domain) and one asscoication (domain and hasDataProperty). The conceptProperty defines the range. |
rdfs:subPropertyOf | association | No comments – |
rdfs:subPropertyOf | association.id = "subPropertyOf" | No comments – |
rdfs:subPropertyOf | association.forwardName = "subPropertyOf" | No comments – |
rdfs:subPropertyOf | association.isFunctional = "false" | No comments – |
rdfs:subPropertyOf | association.isNavigable = "true" | No comments – |
rdfs:subPropertyOf | association.isReflexive="true" | No comments – |
rdfs:subPropertyOf | association.isSymmetric="false" | No comments – |
rdfs:subPropertyOf | association.isTransitive="true" | No comments |
rdfs:domain | association | No comments – |
rdfs:domain | association.id = "domain" | No comments – |
rdfs:domain | association.forwardName = "domain" | No comments – |
rdfs:domain | association.isNavigable = "true" | No comments – |
rdfs:domain | association.isReflexive="false" | No comments – |
rdfs:domain | association.isSymmetric="false" | No comments – |
rdfs:domain | association.isTransitive="true" | No comments |
rdfs:range | association | No comments – |
rdfs:domain | association.id = "range" | No comments – |
rdfs:domain | association.forwardName = "range" | No comments – |
rdfs:domain | association.isNavigable = "true" | No comments – |
rdfs:domain | association.isReflexive="false" | No comments – |
rdfs:domain | association.isSymmetric="false" | No comments – |
rdfs:domain | association.isTransitive="false" | No comments |
Individual | association | An 'instance' association is created. (ie. sourceId = Country, targetId = America) |
– Individual | association.id = "instance" | No comments |
OWL (In)Equality | LexEVS | Comments |
owl:equivalentClass | association | No comments – |
owl:equivalentClass | association.id = "equivalentClass" | No comments – |
owl:equivalentClass | association.forwardName = "equivalentClass" | No comments – |
owl:equivalentClass | association.isFunctional = "false" | No comments – |
owl:equivalentClass | association.isNavigable = "true" | No comments – |
owl:equivalentClass | association.isReflexive="true" | No comments – |
owl:equivalentClass | association.isSymmetric="true" | No comments – |
owl:equivalentClass | association.isTransitive="true" | No comments – |
owl:equivalentClass | association.reverseName="equivalentClass" | No comments |
owl:equivalentProperty | association | No comments – |
owl:equivalentProperty | association.id = "equivalentProperty" | No comments – |
owl:equivalentProperty | association.forwardName = "equivalentProperty" | No comments – |
owl:equivalentProperty | association.isFunctional = "false" | No comments – |
owl:equivalentProperty | association.isNavigable = "true" | No comments – |
owl:equivalentProperty | association.isReflexive="true" | No comments – |
owl:equivalentProperty | association.isSymmetric="true" | No comments – |
owl:equivalentProperty | association.isTransitive="true" | No comments – |
owl:equivalentProperty | association.reverseName="equivalentProperty" | No comments |
owl:sameAs | association | No comments – |
owl:sameAs | association.id = "sameAs" | No comments – |
owl:sameAs | association.forwardName = "sameAs" | No comments – |
owl:sameAs | association.isFunctional = "false" | No comments – |
owl:sameAs | association.isNavigable = "true" | No comments – |
owl:sameAs | association.isReflexive="true" | No comments – |
owl:sameAs | association.isSymmetric="true" | No comments – |
owl:sameAs | association.isTransitive="true" | No comments – |
owl:sameAs | association.reverseName="sameAs" | No comments |
differentFrom | association | No comments |
– differentFrom | association.id = "differentFrom" | No comments |
– differentFrom | association.forwardName = "differentFrom" | No comments |
– differentFrom | association.isFunctional = "false" | No comments |
– differentFrom | association.isNavigable = "true" | No comments |
– differentFrom | association.isReflexive="true" | No comments |
– differentFrom | association.isSymmetric="true" | No comments |
– differentFrom | association.isTransitive="true" | No comments |
– differentFrom | association.reverseName= "differentFrom" | No comments |
owl:AllDifferent | association | No comments – |
owl:AllDifferent | association.id = "AllDifferent" | No comments – |
owl:AllDifferent | association.forwardName = "AllDifferent" | No comments – |
owl:AllDifferent | association.isFunctional = "false" | No comments – |
owl:AllDifferent | association.isNavigable = "true" | No comments – |
owl:AllDifferent | association.isReflexive="true" | No comments – |
owl:AllDifferent | association.isSymmetric="true" | No comments – |
owl:AllDifferent | association.isTransitive="true" | No comments – |
owl:AllDifferent | association.reverseName= "AllDifferent" | No comments |
OWL: Property Characteristics | LexEVS | Comments |
owl:inverseOf | association | No comments – |
owl:inverseOf | association.id = "inverseOf" | No comments |
owl:inverseOf | association.forwardName = "inverseOf" | No comments – |
owl:inverseOf | association.isFunctional = "false" | No comments – |
owl:inverseOf | association.isNavigable = "true" | No comments – |
owl:inverseOf | association.isReflexive="true" | No comments – |
owl:inverseOf | association.isSymmetric="true" | No comments – |
owl:inverseOf | association.isTransitive="true" | No comments – |
owl:inverseOf | association.reverseName="inverseOf" | No comments |
owl:TransitiveProperty | association.isTransitive | association property 'isTransitive' |
owl:SymmetricProperty | association.isSymmetric | association property 'isSymmetric' |
owl:InverseFunctionalProperty | association.isReverseFunctional | association property 'isReverseFunctional' |
owl:FunctionalProperty | association.isFunctional | association property 'isFunctional' |
OWL: Property Restrictions | LexEVS | Comments |
owl:Restriction | concept | Create an anonymous concept for the restriction |
– owl:Restriction | concept.id | System generated – |
owl:Restriction | concept.isActive = true | No comments – |
owl:Restriction | concept.isAnonymous = true | Hard coded "True" |
owl:onProperty | association.id | No comments |
owl: allValuesFrom | concept.entityDescription | String of allValuesFrom values |
– owl: allValuesFrom | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– owl: allValuesFrom | concept.presentation.propertyName | Hard coded "textualPresentation" |
– owl: allValuesFrom | concept.presentation.isPreferred = true | Hard coded "true" |
– owl: allValuesFrom | concept.presentation.text | String of allValuesFrom values |
– owl: allValuesFrom | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. |
– owl: allValuesFrom | concept.conceptProperty.propertyName = type | Hard coded "type" |
– owl: allValuesFrom | concept.conceptProperty.text = "owl:unionOf" | No comments |
owl: someValuesFrom | concept.entityDescription | String of someValuesFrom values |
– owl: someValuesFrom | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– owl: someValuesFrom | concept.presentation.propertyName | Hard coded "textualPresentation" |
– owl: someValuesFrom | concept.presentation.isPreferred = true | Hard coded "true" |
– owl: someValuesFrom | concept.presentation.text | String of someValuesFrom values |
– owl: someValuesFrom | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. |
– owl: someValuesFrom | concept.conceptProperty.propertyName = type | Hard coded "type" |
– owl: someValuesFrom | concept.conceptProperty.text = "owl:intersectionOf" | No comments |
owl:intersectionOf | concept.entityDescription | String of intersectionOf values (ie. Pizza and not VegetarianPizza) |
– owl:intersectionOf | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– owl:intersectionOf | concept.presentation.propertyName | Hard coded "textualPresentation" |
– owl:intersectionOf | concept.presentation.isPreferred = true | Hard coded "true" |
– owl:intersectionOf | concept.presentation.text | String of intersectionOf values (ie. Pizza and not VegetarianPizza) |
– owl:intersectionOf | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. |
– owl:intersectionOf | concept.conceptProperty.propertyName = type | Hard coded "type" |
– owl:intersectionOf | concept.conceptProperty.text = "owl:intersectionOf" | No comments |
UnionOf | concept.conceptProperty.text = "owl:unionOf" | No comments |
owl:complementOf | association | association.id = "subClassOf" |
owl:oneOf | concept.entityDescription | String of oneOf values |
– owl:oneOf | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– owl:oneOf | concept.presentation.propertyName | Hard coded "textualPresentation" |
– owl:oneOf | concept.presentation.isPreferred = true | Hard coded "true" |
– owl:oneOf | concept.presentation.text | String of oneOf values |
– owl:oneOf | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. |
– owl:oneOf | concept.conceptProperty.propertyName = type | Hard coded "type" |
– owl:oneOf | concept.conceptProperty.text = "owl:intersectionOf" | No comments |
owl:hasValue | associationQualification.nameAndValueList.content | No comments |
owl:minCardinality | concept.entityDescription | String of minCardinality Values (ie. (hasTopping min 3) and Pizza) |
– owl:minCardinality | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– owl:minCardinality | concept.presentation.propertyName | Hard coded "textualPresentation" |
– owl:minCardinality | concept.presentation.isPreferred = true | Hard coded "true" |
– owl:minCardinality | concept.presentation.text | String of minCardinality Value (ie. (hasTopping min 3) and Pizza) |
– owl:minCardinality | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. |
– owl:minCardinality | concept.conceptProperty.propertyName = type | Hard coded "type" |
– owl:minCardinality | concept.conceptProperty.text = "owl:intersectionOf" | No comments |
owl:maxCardinality | concept.entityDescription | String of maxCardinality Values (ie. (hasTopping max 2) and Pizza) |
– owl:maxCardinality | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– owl:maxCardinality | concept.presentation.propertyName | Hard coded "textualPresentation" |
– owl:maxCardinality | concept.presentation.isPreferred = true | Hard coded "true" |
– owl:maxCardinality | concept.presentation.text | String of maxCardinality Values (ie. (hasTopping max 2) and Pizza) |
– owl:maxCardinality | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. |
– owl:maxCardinality | concept.conceptProperty.propertyName = type | Hard coded "type" |
– owl:maxCardinality | concept.conceptProperty.text = "owl:intersectionOf" | No comments |
owl:cardinality | concept.entityDescription | String of cardinality Values |
– owl:cardinality | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– owl:cardinality | concept.presentation.propertyName | Hard coded "textualPresentation" |
– owl:cardinality | concept.presentation.isPreferred = true | Hard coded "true" |
– owl:cardinality | concept.presentation.text | String of cardinality Values |
– owl:cardinality | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. |
– owl:cardinality | concept.conceptProperty.propertyName = type | Hard coded "type" |
– owl:cardinality | concept.conceptProperty.text = "owl:intersectionOf" | No comments |
owl:disjointWith | association | association.id = "disjointWith" |
OWL: Annotation Property | LexEVS | Comments |
rdfs:label | Presentation | No comments – |
rdfs:label | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– rdfs:label | concept.presentation.propertyName = "textualPresentation" | Hard coded "textualPresentation" |
– rdfs:label | concept.presentation.isPreferred = true | Hard coded "true" |
– rdfs:label | concept.presentation.text | Value of rdfs:label |
rdfs:comment | Comment | No comments – |
rdfs:comment | concept.comment.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. |
– rdfs:comment | concept.comment.propertyName = "comment" | Hard coded "comment" |
– rdfs:comment | concept.presentation.text | Value of rdfs:comment |
rdfs:seeAlso | conceptProperty | No comments |
rdfs:isDefinedBy | conceptProperty | No comments |
OWL: Versioning | LexEVS | Comments |
owl:versionInfo | codingScheme.representsVersion | No comments |
priorVersion | Not mapped | No comments |
backwardCompatibleWith | Not mapped | No comments |
owl:incompatibleWith | association | No comments – |
owl:incompatibleWith | association.id = "incompatibleWith" | No comments – |
owl:incompatibleWith | association.forwardName = "incompatibleWith" | No comments – |
owl:incompatibleWith | association.isFunctional = "false" | No comments – |
owl:incompatibleWith | association.isNavigable = "true" | No comments – |
owl:incompatibleWith | association.isReflexive="true" | No comments – |
owl:incompatibleWith | association.isSymmetric="true" | No comments – |
owl:incompatibleWith | association.isTransitive="true" | No comments – |
owl:incompatibleWith | association.reverseName="incompatibleWith" | No comments |
DeprecatedClass | Concept attribute setIsActive = false | Not mapped |
DeprecatedProperty | — | Not mapped |
...
OWL Element | LexGrid | Comments | |
|---|---|---|---|
OWL: RDF Schema Features | LexGrid | Comments | |
owl:ontology | codingScheme | Hard coded "NCI_Thesaurus" | |
xml:lang | codingScheme.defaultLanguage | Hard coded "en" | |
dc:title | codingScheme.formalName | Hard coded "NCI Thesaurus" | |
rdfs:label | codingScheme.localName | Hard coded "NCI_Thesaurus" | |
– rdfs:label | Hard coded "40010" | No comments – | |
rdfs:label | Hard coded "urn:oid:2.16.840.1.113883.3.26.1.1" | No comments | |
URI | codingScheme.registeredName | Hard coded "http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#" | |
owl:versionInfo | codingScheme.representsVersion | No comments | |
dc:rights | codingScheme.copyright | Read from hard coded "Terms.txt" file . | |
rdfs:comment | codingScheme.entityDescription | No comments – | |
rdfs:comment | codingScheme.isNative | Hard coded "true" | |
owl:Class (Thing, Nothing) | concept | No comments | |
code | concept.id | No comments | |
– code | concept.isActive | Hard coded as "true" unless class "owl:DeprecatedClass", then 'false' | |
– code | concept.isAnonymous | No comments | |
rsfs:label | concept.entityDescription | No comments | |
rdf:comment | concept.comment | No comments | |
rdf:comment | conceptProperty | Indicate whether the concept is primative (has no equavalent classes) | |
– rdf:comment | concept.conceptProperty.propertyName | Hard coded as "primitive" | |
– rdf:comment | concept.conceptProperty.text | "true" | |
– rdf:comment | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
– rdf:comment | presentation | Provide default presentation to match concept entity description if not provided as property | |
– rdf:comment | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. | |
– rdf:comment | concept.presentation.propertyName | Hard coded "NCI_Preferred_Term" | |
rdfs:label | concept.presentation.text | concept.entityDescription | |
– rdfs:label | conceptProperty | Property with designated concept name label (per NCI requirements and used in codeToName/nameToCode lookup). | |
– rdfs:label | concept.conceptProperty.propertyName | Hard coded as "CONCEPT_NAME" | |
rdfs:label | concept.conceptProperty.text | concept.entityDescription | |
– rdfs:label | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
– rdfs:label | relation | Top-level container for associations (non-inheritable, non-defining relationships between concepts. | |
– rdfs:label | relations.dc | Hard coded as "associations" | |
– rdfs:label | relations.isNative | Hard coded as "true" | |
– rdfs:label | relations.entityDescription | Hard coded as "Non-inheritable non-defining relations." | |
– rdfs:label | relation | Top-level container for roles (inheritable relationships) | |
– rdfs:label | relations.dc | Hard coded as "roles" | |
– rdfs:label | relations.isNative | Hard coded as "true" | |
– rdfs:label | relations.entityDescription | Hard coded as "Inheritable/defining relations." | |
rdfs:subClassOf | association | Association for subtype hierarchy. | |
– rdfs:subClassOf | association.id = "hasSubtype" | No comments – | |
rdfs:subClassOf | association.forwardName = "hasSubtype" | No comments – | |
rdfs:subClassOf | association.reverseName = "isA" | No comments – | |
rdfs:subClassOf | association.isNavigable = "true" | Hard coded as "true" | |
– rdfs:subClassOf | Hard coded as "true" | No comments – | |
rdfs:subClassOf | Hard coded as "false" | No comments – | |
rdfs:subClassOf | Hard coded as "true" | No comments | |
hasElement | association | Association used to register component classes as elements of anonymous node representations. | |
– hasElement | association.id = "hasElement" | No comments | |
– hasElement | association.forwardName = "hasElement" | No comments | |
– hasElement | association.isNavigable = "true" | Hard coded as "true" | |
– hasElement | Hard coded as "false" | No comments | |
– hasElement | Hard coded as "true" | No comments | |
rdfs:domain | association | Association for role_has_domain relations | |
– rdfs:domain | association.id = "Role_Has_Domain" | No comments – | |
rdfs:domain | association.forwardName = "roleHasDomain" | No comments – | |
rdfs:domain | association.reverseName = "kindIsDomainOf" | No comments – | |
rdfs:domain | association.isNavigable = "true" | Hard coded as "true" | |
– rdfs:domain | Hard coded as "false" | No comments – | |
rdfs:domain | Hard coded as "false" | No comments – | |
rdfs:domain | Hard coded as "true" | No comments | |
rdfs:range | association | Association for range relations | |
– rdfs:range | association.id = "Role_Has_Range" | No comments – | |
rdfs:range | association.forwardName = "roleHasRange" | No comments – | |
rdfs:range | association.reverseName = "kindIsRangeOf" | No comments – | |
rdfs:range | association.isNavigable = "true" | Hard coded as "true" | |
– rdfs:range | association.isReflexive="false" | Hard coded as "false" | |
– rdfs:range | association.isSymmetric="false" | Hard coded as "false" | |
– rdfs:range | association.isTransitive="false" | Hard coded as "false" | |
rdf:Property (ObjectProperty) | association | An association between two classes (hasDomain, hasRange) | |
rdfs:subPropertyOf | — | Not mapped | |
OWL (In)Equality | LexGrid | Comments | |
owl:equivalentClass | association | Association for equivalent class. | |
– owl:equivalentClass | association.id = "equivalentClass" | No comments – | |
owl:equivalentClass | association.forwardName = "equivalentClass" | No comments – | |
owl:equivalentClass | association.reverseName = "equivalentClass" | No comments – | |
owl:equivalentClass | association.isNavigable = "true" | Hard coded as "true" | – – |
owl:equivalentClass | association.isReflexive="true" | Hard coded as "true" | |
– owl:equivalentClass | association.isSymmetric="true" | Hard coded as "true" | |
– owl:equivalentClass | association.isTransitive="true" | Hard coded as "true" | |
OWL: Property Characteristics | LexGrid | Comments | |
owl:inverseOf | association | No comments – | |
owl:inverseOf | association.id = "inverseOf" | No comments – | |
owl:inverseOf | association.forwardName = "inverseOf" | No comments – | |
owl:inverseOf | association.isFunctional = "false" | No comments – | |
owl:inverseOf | association.isNavigable = "true" | No comments – | |
owl:inverseOf | association.isReflexive="true" | No comments – | |
owl:inverseOf | association.isSymmetric="true" | No comments – | |
owl:inverseOf | association.isTransitive="true" | No comments – | |
owl:inverseOf | association.reverseName="inverseOf" | No comments | |
owl:TransitiveProperty | association.isTransitive | association property 'isTransitive' | |
owl:SymmetricProperty | association.isSymmetric | association property 'isSymmetric' | |
owl:InverseFunctionalProperty | association.isReverseFunctional | association property 'isReverseFunctional' | |
owl:FunctionalProperty | association.isFunctional | association property 'isFunctional' | |
OWL: Property Restrictions | LexGrid | Comments | |
owl:Restriction | concept | Anonymous concept created. | |
– owl:Restriction | concept.entityDescription = "RestrictionOn: " + association name | Concatination of "Restriction On: " and assocation name | |
– owl:Restriction | concept.isAnonymous = true | No comments | |
owl: allValuesFrom | associationQualification.association.Qualifier = "AllValuesFrom" | No comments | |
owl: someValuesFrom | associationQualification.association.Qualifier = "someValuesFrom" | No comments | |
owl:intersectionOf | concept.entityDescription | Concatination of "Restriction On: " and assocation name | |
– owl:intersectionOf | concept.isAnonymous = true | No comments – | |
owl:intersectionOf | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. | |
– owl:intersectionOf | concept.presentation.propertyName | Hard coded "textualPresentation" | |
– owl:intersectionOf | concept.presentation.isPreferred = true | Hard coded "true" | |
– owl:intersectionOf | concept.presentation.text | Set to concept.entityDescription | |
– owl:intersectionOf | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
– owl:intersectionOf | concept.conceptProperty.propertyName = type | Hard coded "type" | |
– owl:intersectionOf | concept.conceptProperty.text = "owl:intersectionOf" | No comments | |
owl:unionOf | concept.entityDescription | Concatination of "Restriction On: " and assocation name | |
– owl:unionOf | concept.isAnonymous = true | No comments – | |
owl:unionOf | concept.presentation.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. | |
– owl:unionOf | concept.presentation.propertyName | Hard coded "textualPresentation" | |
– owl:unionOf | concept.presentation.isPreferred = true | Hard coded "true" | |
– owl:unionOf | concept.presentation.text | Set to concept.entityDescription | |
– owl:unionOf | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
– owl:unionOf | concept.conceptProperty.propertyName = type | Hard coded "type" | |
– owl:unionOf | concept.conceptProperty.text = "owl:unionOf" | No comments | |
owl:oneOf | concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
– owl:oneOf | concept.conceptProperty.propertyName = "owl:oneOf" | Hard coded "owl:oneOf" | |
– owl:oneOf | concept.conceptProperty.text | String of oneOf values | |
OWL: Annotation Property | LexGrid | Comments | |
rdfs:comment | Comment | No comments – | |
rdfs:comment | concept.comment.propertyId | Generated value for property textual presentation using "P" concatenated with a steadily incremented numerical value. | |
– rdfs:comment | concept.comment.propertyName = "comment" | Hard coded "comment" | |
– rdfs:comment | concept.presentation.text | Value of rdfs:comment | |
rdfs:seeAlso | conceptProperty | No comments | |
rdfs:isDefinedBy | conceptProperty | No comments | |
OWL: Versioning | LexGrid | Comments | |
owl:versionInfo | codingScheme.representsVersion | No comments | |
priorVersion | – | Not mapped | |
backwardCompatibleWith | – | Not mapped | |
DeprecatedClass | – | Not mapped | |
DeprecatedProperty | – | Not mapped |
...
Coding Scheme | RRF Column Name | RRF Definition | NCI Meta only | LexGrid Model Element | Comments | |
|---|---|---|---|---|---|---|
None | None | None | NA | codingScheme.representsVersion | No comments | |
None | None | None | NA | codingScheme.codingScheme | Hard coded in java file as "UMLS_SemNet" | |
None | None | None | NA | codingScheme.formalName | Hard coded in java file as "UMLS Semantic Network" | |
None | None | None | NA | codingScheme.defaultLanguage | Hard coded in java file as "en" | |
None | None | None | NA | codingScheme.approxNumConcepts | Hard coded in java file as | |
None | None | None | NA | codingScheme.entityDescription | hard coded in java file as "The UMLS Semantic Network is one of three UMLS Knowledge Sources developed as part of the Unified Medical Language System project. The network provides a consistent Hategorization of all concepts represented in the UMLS Metathesaurus." | |
license.txt | None | None | NA | codingScheme.copyright | Read from license.txt file or hard coded reference in java file | |
license.txt | None | None | NA | codingScheme.registeredName | Hard coded in java file as "urn:lsid:nlm.nih.gov:semnet" | |
license.txt | None | None | NA | codingScheme.concepts.dc | Hard coded in java file as "concepts" | |
license.txt | None | None | NA | codingScheme.relations.dc | Hard coded in java file as "relations" | |
license.txt | None | None | NA | codingScheme.mappings.dc | Hard coded in java file as "mappings" | |
license.txt | None | None | NA | codingScheme.localNameList | No comments | |
license.txt | None | None | NA | codingScheme.localNameList. | Hard coded in java file as "UMLS_SemNet" | |
license.txt | None | None | NA | codingScheme.localNameList | No comments | |
license.txt | None | None | NA | codingScheme.localNameList. | No comments | |
license.txt | None | None | NA | codingScheme.source | No comments | |
license.txt | None | None | NA | codingScheme.source.content | No comments | |
license.txt | None | None | NA | codingScheme.localNameList | No comments | |
license.txt | None | None | NA | codingScheme.localNameList. | No comments | |
license.txt | None | None | NA | codingScheme.localNameList | No comments | |
license.txt | None | None | NA | codingScheme.localNameList. | No comments | |
license.txt | None | None | NA | codingScheme.localNameList | No comments | |
license.txt | None | None | NA | codingScheme.localNameList. | No comments | |
license.txt | None | None | NA | codingScheme.localNameList | No comments | |
license.txt | None | None | NA | codingScheme.localNameList. | No comments | |
license.txt | None | None | NA | mappings.supportedFormat | No comments | |
license.txt | None | None | NA | mappings.supportedFormat.localId | Hard coded in java file as "text/plain" | |
license.txt | None | None | NA | mappings.supportedFormat.urn | Hard coded in java file as "urn:oid:2.16.840.1.113883.6.10:text_plain" | |
license.txt | None | None | NA | mappings.supportedAssociation | No comments | |
SRDEF | RL | None | NA | mappings.supportedAssociation.localId | No comments | |
SRDEF | RL | None | NA | mappings.supportedContext | No comments | |
SRDEF | RL | None | NA | mappings.supportedSource | No comments | |
SRDEF | RL | None | NA | mappings.supportedSource.localId | Hard coded in java file as "NLM" | |
SRDEF | RL | None | NA | mappings.supportedSource.urn | Hard coded in java file as "urn:lsid:nlm.nih.gov" | |
SRDEF | RL | None | NA | mappings.supportedHierarchy | No comments | |
SRDEF | RL | None | NA | mappings.supportedHierarchy.localId | Hard coded in java file as "is_a" | |
SRDEF | RL | None | NA | mappings.supportedHierarchy.isForwardNavigable | Hard coded as "true" | |
SRDEF | RL | None | NA | mappings.supportedHierarchy.rootCode | Hard coded as "@" | |
SRDEF | RL | None | NA | mappings.supportedHierarchy.associationList | Hard coded in java file as "hasSubtype" | |
SRDEF | RL | None | NA | mappings.supportedAssociationQualifier | No comments | |
SRFLD | COL | None | NA | mappings.supportedProperty | No comments | |
SRFLD | COL | None | NA | mappings.supportedProperty.localId | If SRDEF appears in the FIL column then this is treated a potential supported property and is entered in supported properties as such. |
|
SRFLD | COL | None | NA | mappings.supportedProperty.urn | Hard coded in java file as "" | |
SRFLD | COL | None | NA | mappings.supportedLanguage | No comments | |
SRFLD | COL | None | NA | mappings.supportedLanguage.localId | Hard coded in java file as "en" | |
SRFLD | COL | None | NA | mappings.supportedLanguage.urn | Hard coded in java file as "urn:oid:2.16.840.1.113883.6.84:en" | |
SRFLD | COL | None | NA | mappings.supportedCodingScheme | No comments | |
SRFLD | COL | None | NA | mappings.supportedCodingScheme.localId | Hard coded in java file as "UMLS_SemNet" | |
SRFLD | COL | None | NA | mappings.supportedCodingScheme.urn | Hard coded in java file as "urn:lsid:nlm.nih.gov:semnet" | |
SRFLD | COL | None | NA | mappings.supportedRepresentationalForm | No comments | |
SRFLD | COL | None | NA | mappings.supportedConceptStatus | No comments | |
SRFLD | COL | None | NA | mappings.supportedPropertyLink | No comments | |
SRFLD | COL | None | NA | mappings.supportedPropertyQualifier | No comments | |
SRFLD | COL | None | NA | mappings.supportedDataType | No comments | |
Concepts | RRF Column Name | RRF Definition | NCI Meta Only | LexGrid Model Element | Comments | |
SRDEF | UI |
|
| concept.id(inherited from Entity) | No comments | |
SRDEF | STY/RL |
|
| concept.enitityDescription(inheritance path Entity->versionableAndDescribable) | No comments | |
|
|
|
| concept.conceptProperty | No comments | |
SRDEF | NH |
|
| concept.conceptProperty.text.content | No comments | |
|
|
|
| concept.conceptProperty.format | Hard coded in java file as "text/plain" | |
|
|
|
| concept.conceptProperty.propertyName | Hard coded in java file as "NH" | |
|
|
|
| concept.conceptProperty.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
|
|
|
| concept.presentation | No comments | |
|
|
|
| concept.presentation.propertyName (inherited from Property) | Hard coded in java file as "STY/RL" or "ABR" | |
|
|
|
| concept.presentation.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
SRDEF | STY/RL, ABR |
|
| concept.presentation.text.content | No comments | |
|
|
|
| concept.presentation.format | Hard coded in java file as "text/plain" | |
|
|
|
| concept.presentation.isPreferred | Hard coded in java file as true. | |
|
|
|
| concept.definition.propertyName (inherited from Property) | Hard coded in java file as "DEF" | |
|
|
|
| concept.definition.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
SRDEF | DEF |
|
| concept.definition.text.content | No comments | |
|
|
|
| concept.definition.format | Hard coded in java file as "text/plain" | |
|
|
|
| concept.definition.isPreferred | Hard coded in java file as true. | |
|
|
|
| concept.comment | No comments | |
SRDEF | EX |
|
| concept.comment.propertyName (inherited from Property) | Hard coded in java file as "EX" | |
|
|
|
| concept.comment.text.content | No comments | |
|
|
|
| concept.comment.format | Hard coded in java file as "text/plain" | |
|
|
|
| concept.comment.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
|
|
|
| concept.instruction | No comments | |
|
|
|
| concept.instruction.propertyName (inherited from Property) | Hard coded in java file as "UN" | |
SRDEF | UN |
|
| concept.instruction.text.content | No comments | |
|
|
|
| concept.instruction.format | Hard coded in java file as "text/plain" | |
|
|
|
| concept.instruction.propertyId | Generated value for property using "P" concatenated with a steadily incremented numerical value. | |
Relations | RRF Column Name | RRF Definition | NCI Meta Only | LexGrid Model Element | Comments | |
SRSTR | RL |
|
| association.id (inherited from Entity) | In the case of RL value is "isa" the id is hard coded to hasSubtype. The direction of the association is also reversed | |
|
|
|
| association.isTransitive | Hard coded to true if the value of RL is "isa" | |
SRSTR | RL |
|
| association.forwardName | Reversed when value of RL is "isa" | |
SRSTR | STY/RL |
|
| associationInstance.sourceId | Reversed when value of RL is "isa" | |
SRSTR | STY/RL |
|
| associationTarget.targetId | No comments | |
SRDEF | RIN |
|
| association.reverseName | No comments | |
SRDEF | DEF |
|
| association.entityDescription.content (inheritance path for entityDescription is Entity->versionableAndDescribable) | When SRDEF value RT is "RL" | |
SRSTRE1 | UI/STY(first argument) |
|
| associationInstance.sourceId | Reversed when value of RL is "isa" | |
SRSTRE1 | UI/STY(2nd argument) |
|
| associationTarget.targetId | Reversed when value of RL is "isa" |
...
OBO Class | OBO Entity | LexGrid Model Element | Notes | ||
|---|---|---|---|---|---|
Document Header | format-version | — | Not mapped | ||
Document Header | data-version | CodingScheme.representsVersion | Creates a codingSchemeVersion and SystemRelease record. If not specified, then hard coded "UNASSIGNED" | ||
Document Header | version | CodingScheme.representsVersion | Deprecated - use data-version if present. | ||
Document Header | date | — | Not mapped | ||
Document Header | saved-by | — | Ignored but included if contained in the remark entity. | ||
Document Header | auto-generated-by | — | Ignored but included if contained in the remark entity. | ||
Document Header | subsetdef | — | Not mapped. | ||
Document Header | import | — | Deprecated - Imports are used to assemble a larger document from smaller. | ||
Document Header | typeref | — | Deprecated. | ||
Document Header | synonymtypedef | — | Not mapped. | ||
Document Header | idspace | — | Not mapped.The idspace is a triple - localName, URN and description. | ||
Document Header | default-relationship-id-prefix | — | Not mapped. | ||
Document Header | id-mapping | CodingScheme.supportedAssociation | This is more generalized than the LexGrid model, as it supports mapping between any id's. Note that its primary purpose, however, is to handle supportedAssociation. | ||
Document Header | remark | CodingScheme.entityDescription | Will combine multiple remark entities into the entityDescription. | ||
Document Header | default-namespace | codingScheme.codingScheme | Will use default-namespace if provided; otherwise will use filename without the extension. | ||
Document Header | default-namespace | codingScheme.formalName | Will use default-namespace if provided; otherwise will use filename without the extension. | ||
Document Header | default-namespace | codingScheme.registeredName | Combination of "urn:lsid:bioontology.org:" and if provided, the value in "default-namespace"; but if not will use filename without the extension. | ||
|
| codingScheme.defaultLanguage | Hard coded "en" | ||
|
| codingScheme.isNative | Hard coded "true" | ||
Stanza | id | CodedEntry.conceptCode | No notes | ||
Stanza | name | CodedEntry.entityDescription | No notes | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="31232c0b5e67e0f3-cdaff589-4eb04a3e-934fa256-bb009bda7251ba895099f8fd"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.presentation['textualPresentation'].text | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="cd8998de76725b7f-3f85826c-495e425b-8f23a482-6f5c4f34215aad324b8bb557"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.presentation['textualPresentation'].isPreferred = true | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | alt_id |
| No notes | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="f4bb701fbb1a0488-9a5b92d4-43ed4183-a24d9893-cd9a15ae59e3f80cc941f67a"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.property['alt_id'].propertyId | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="939ca970c851cfea-e3398bfc-45f6434f-8b46a996-ccdc8353bddb392f1811c83c"><ac:plain-text-body><![CDATA[ |
|
| CodedEntry.property['alt_id'].text | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | is_anonymous | CodedEntry.isAnonymous = true | No notes | ||
Stanza | is_obsolete | CodedEntry.isActive = false | No notes | ||
Stanza | def | CodedEntry.definition | No notes | ||
|
| CodedEntry.definition.isPreferred = true | No notes | ||
Stanza | def.dbxref | — | See dbxref | ||
Stanza | comment | CodedEntry.comment.text | No notes | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0b3fba4ee7e5f6a1-bec2cc7a-4cc64a33-b01d8941-b7b58376873b1a637068f1e4"><ac:plain-text-body><![CDATA[ | Stanza | subset | property[subset tag] | See subsetdef | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="bd7a25397e82a67a-9b192b81-439d4bea-a864b990-0c4beeef8bee222798d615ca"><ac:plain-text-body><![CDATA[ | Stanza | synonym | presentation['textualPresentation'].text | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="78d32fb59adf8a28-2943d5e5-48344b2e-a3fdb43e-ea20570133e6a49031355c8a"><ac:plain-text-body><![CDATA[ | Stanza | synonym.scope | presentation['textualPresentation'].degreeOfFidelity | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="a3791348397fd2e0-cb8a4728-4a9b4725-882cb606-12e04f7952dd75e728b0c6fe"><ac:plain-text-body><![CDATA[ | Stanza | synonym.type | presentation['textualPresentation'].representationalForm | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | synonym.dbxref | --- | See dbxref | ||
Stanza | exact_synonym | — | See synonym | ||
Stanza | narrow_synonym | — | See synonym | ||
Stanza | broad_synonym | — | See synonym | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="693ea913fcb77b2e-3ec4e52f-43c4434d-a8b8be12-5cefd1ca51490184098a11f0"><ac:plain-text-body><![CDATA[ | Stanza | xref | associations.['mapsTo'] | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | xref_analog | — | See synonym | ||
Stanza | xref_unk | None | No notes | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="17fd3e9c391d168b-dccb865e-432c4862-9c0c8c68-38ca5499e9902df8db8370e7"><ac:plain-text-body><![CDATA[ | Stanza | is_a | associations.['hasSubtype'] | Reverse of the source and target. | ]]></ac:plain-text-body></ac:structured-macro> |
Stanza | is_a.namespace | None | If present, the supplied namespace becomes the owning "codingScheme". | ||
Stanza | is_a.derived | associations.hasSubtype.associationQualifier | If present, need to include derived in the supportedAssociationQualifiers section | ||
Stanza | intersection_of | None | Processed the same way that OWL intersection operator is processed. This includes creation of anonymous sets. | ||
Stanza | union_of | — | Same as OWL | ||
Stanza | disjoint_from | — | Same as OWL | ||
Stanza | relationship | associations. | No notes | ||
Stanza | relationship.not_necessary | associations..associationQualifier | No notes | ||
Stanza | relationship.inverse_necessary | associations..associationQualifier | No notes | ||
Stanza | relationship.namespace | None | If present, the supplied namespace becomes the owning "codingScheme". | ||
Stanza | relationship.derived | associations..associationQualifier | No notes | ||
Stanza | relationship.cardinality | associations..associationQualifier | No notes | ||
Stanza | relationship.maxCardinality | associations..associationQualifier | No notes | ||
Stanza | relationship.minCardinality | associations..associationQualifier | No notes | ||
Stanza | is_obsolete | codedEntry.isActive = false | No notes | ||
Stanza | replaced_by | None | No notes | ||
Stanza | consider | — | Not mapped | ||
Stanza | use_term | — | Deprecated | ||
dbxref | dbxref name | CodedEntry..source | No notes | ||
| supportedSource | None | dbxref name format is inconsistent. In most cases, it can be the localName of supportedSource, but special processing may be necessary in the case of URL's, etc | ||
dbxref | dbxref description | — | Not mapped. | ||
dbxref | trailing modifiers | — | Not mapped. | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="23a6f81e10b9ad2b-0262795c-443145bc-9b8789ce-5aa6850a47f894490afc25b4"><ac:plain-text-body><![CDATA[ | typeDef Stanza | domain | associations.['has_domain'] | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="8c873cdc4d726739-2db81c48-4ff9459f-9c5bafec-a26251b892ac8babeb2bc5c9"><ac:plain-text-body><![CDATA[ | typeDef Stanza | range | associations.['has_range'] | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6c6ce050a81bd9ce-2c0ed111-4bc34247-b343b2c9-d9627febe142fedc012b5e6d"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_cyclic | property['is_cyclic'] | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="f88655cf58b9d7e1-3f4b5564-4edf4a45-b49ea5ef-f91c6e6ae22fbe49b4d1d1e1"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_reflexive | property['is_reflexive'] | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isReflexive | No notes | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="b52d5166577bc601-e6d71dbb-44af481b-9ec7874e-e800a030bf2dcb63c769bacb"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_symmetric | property['is_symmetric'] | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isSymmetric | No notes | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="718844204ee7aaef-40ed8c51-4f914266-bebea993-585943ce9c70ea094e9d11b4"><ac:plain-text-body><![CDATA[ | typeDef Stanza | is_transitive | property['is_transitive'] | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
|
| association.isTransitive | No notes | ||
typeDef Stanza | inverse_of | association.inverse | No notes | ||
instance stanza | id | same rules as general stanza | Same rules as general stanza | ||
instance stanza | name | same rules as general stanza | Same rules as general stanza | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="66924929542599ac-9b0643e8-47284558-85d1bb5b-08b5aafc7fdebb6a890fdda0"><ac:plain-text-body><![CDATA[ | instance stanza | instance_of | association['has_instance'] | No notes | ]]></ac:plain-text-body></ac:structured-macro> |
instance stanza |
| CodedEntry.property.property="" | Data type properties go in Coded Entry property section |
...
HL7 Table | HL7 Column | LexGrid Model Element | Notes | Intentionally Not mapped | Outstanding issues | ||
|---|---|---|---|---|---|---|---|
Model | <modelID> | <codingSchemeName> | No notes |
|
| ||
| <name> | <formalName> | No notes |
|
| ||
| <registeredName> |
| No notes |
|
| ||
| <defaultLanguage> | en* | No notes |
|
| ||
| <versionNumber> | <representsVersion> | No notes |
|
| ||
| <isNative> | 0* | No notes |
|
| ||
| <approximateNumberofConcepts> | Result of count on concept bearing table? | No notes |
|
| ||
| <firstRelease> | MISSING | No notes |
|
| ||
| <modifiedRelease> | MISSING | No notes |
|
| ||
| <deprecated> | MISSING | No notes |
|
| ||
| <description> | <entityDescription> | No notes |
|
| ||
| <copyright> | MISSING | No notes |
|
| ||
VCS_code_system | codeSystemId | codingScheme.registeredName | Moved to metadata file. |
|
| ||
| codeSystemType | commonTypes::Properties | This is an HL7 specific code system property to distinguish internal vs external code systems. Moved to metadata file. |
|
| ||
| codeSystemName | concept.conceptCode | Moved to metadata file. |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="c864587484e5f114-705df467-4e204990-a9628bbe-14f866b3c32f05b39f9a919b"><ac:plain-text-body><![CDATA[ |
| codeSystemName | concept.presentation['textualPresentation'].text | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| fullName | codingScheme.formalName | No notes |
|
| ||
| description | codingScheme.entityDescription | Moved to metadata file. |
|
| ||
| releaseId | codingScheme.representsVersion | Moved to metadata file. |
|
| ||
| copyrightNotice | codingScheme.copyright | Moved to metadata file. |
|
| ||
| literal('en') | codingScheme.defaultLanguage | Moved to metadata file. |
|
| ||
VCS_concept_code_xref | internalId | None | No notes |
|
| ||
| Concept Code | concept.conceptCode | No notes | RIM db column conceptCode2 |
| ||
| Case Difference | commonTypes::Properties | Basically a property to outline whether there are case differences in the Concept Code or not (mainly used, but not restricted tor units of measure) | RIM db column codeInstance |
| ||
| Status | concept.isActive=(conceptStatus=='A'?) | No notes | RIM db column conceptStatus |
| ||
|
| concept.conceptStatus | Not used by HL7. A = isActive, R = retired |
|
| ||
VCS_concept_designation | internalId |
| foreign key |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="9d10eab9f01b2983-8f6d3a8a-44004aa1-98869d5c-31731a07284aeae2bc287c53"><ac:plain-text-body><![CDATA[ |
| designation | concept.presentation['textualPresentation'].text | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| designationSeq |
| No notes |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="d4547b58550975b8-8f16df53-46bf4b52-8e4fb9a8-26346ad75b0958b158eb4d75"><ac:plain-text-body><![CDATA[ |
| language | concept.presentation['textualPresentation'].language | Can be omitted if language = default language |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="99b3a3e20a43676a-4c7f9a4c-49544275-abfca0e0-92d089e92e04c224f72414f2"><ac:plain-text-body><![CDATA[ |
| preferredForLanguage | concept.presentation['textualPresentation'].isPreferred | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ab84b956dd29d05d-dc1b2fc5-4a83400a-be83ad0c-444e189b9bb13d1efb37ef82"><ac:plain-text-body><![CDATA[ | VCS_concept_description | internalId | with(codeSystem[deref(internalId)].concept[deref(internalId)]).definition | foreign key |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6e18875a1739b398-699b6f39-461a4ee5-b47c89a4-a0410e5416973715db75ee25"><ac:plain-text-body><![CDATA[ |
| description | concept.presentation['textualPresentation'].text | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="21f3de3ed59d9c3f-7fcafbd6-49604d54-aca38021-f88acf69661f7c6a00b077b3"><ac:plain-text-body><![CDATA[ |
| language | concept.presentation['textualPresentation'].language | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="d991d6439d190cc2-944d3f16-430d4e9a-99f0b38e-1134362527424b78ecf67448"><ac:plain-text-body><![CDATA[ |
| literal('true') | concept.presentation['textualPresentation'].isPreferred | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="fff3db1d0aea7d1c-c14b69fb-464746bf-9ad99479-9bca01408a81bcc0af71ba15"><ac:plain-text-body><![CDATA[ |
| uniqueId() | concept.presentation['textualPresentation'].propertyId | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="7e40314b2aefe3e9-35d49a37-46884b2d-a1648170-fdc6854b6060effb413abc80"><ac:plain-text-body><![CDATA[ |
| literal('definition') | concept.presentation['textualPresentation'].property | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
VCS_concept_property | internalId | None | foreign key |
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| ||
| propertyCode | concept.property.property | No notes |
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| ||
| propertySeq | None | Currently not used by HL7 |
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| ||
| propertyValue | concept.property.text | No notes |
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| ||
| language | concept.property.language | No notes |
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| ||
VCS_concept_relationship | relationCode | association.association | No notes |
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| sourceInternalId | associationInstance.sourceConcept | No notes |
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| targetInternalId | associationTarget.targetConcept | No notes |
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Model | modelID | systemRelease.releaseId | No notes |
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| name | service.service | No notes |
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| versionNumber | service.version | No notes |
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| ||
| lastModifiedDate | systemRelease.releaseDate | No notes |
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| developingOrganization | systemRelease.releaseAgency | No notes |
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| committeeID | Note | No notes |
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| description | systemRelease.entityDescription | No notes |
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| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) | systemRelease.releaseURN | No notes |
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| literal('true') | systemRelease.isLatest | Also have to set the prior release isLatest to false |
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| preceding-sibling/releaseOrder + 1 | systemRelease.releaseOrder | No notes |
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Model | modelID | commonTypes::Properties | No notes |
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(Special mapping for NCI) | name | codingScheme.localName | No notes |
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| versionNumber | codingScheme.representsVersion | No notes |
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| lastModifiedDate | commonTypes::Properties | No notes |
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| developingOrganization | commonTypes::Properties | No notes |
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| ||
| committeeID | None | No notes |
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| description | codingScheme.entityDescription | No notes |
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| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) | codingScheme.registeredName | No notes |
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| literal('true') | commonTypes::Properties | Also have to set the prior release isLatest to false |
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| preceding-sibling/releaseOrder + 1 | commonTypes::Properties | No notes |
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| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="f30259f0a963104f-3618f31c-4af248e4-a81bbcf9-18636af333da8ccbec354940"><ac:plain-text-body><![CDATA[ | RIM_vocabulary_domain | vocDomain | codingscheme["VocabularyDomain"].concept.conceptCode | Vocabulary Domains are carried in a code system of vocabulary domains. |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="49674bbbb6d74b38-cfbdc745-46ff4eef-91ffafb8-4d77aa9e11bbac988897ee5c"><ac:plain-text-body><![CDATA[ |
|
| codingscheme["VocabularyDomain"].concept.presentation["textualPresentation"].text | preferredPresentation |
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| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="cfa35af05934b139-a14504b0-48de4b63-9ab994ba-86f20e671b00ff20272cc2fa"><ac:plain-text-body><![CDATA[ |
| description | codingscheme["VocabularyDomain"].concept.definition.text | preferredDefinition for code |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="74752f59a0c87655-98f9f39c-4a4a4dc5-bdbd8192-6652b24ada36b19359032e82"><ac:plain-text-body><![CDATA[ |
| restrictsDomain | codingscheme["VocabularyDomain"].association["hasSubtype"].sourceConcept | Should this be hasSubtype or something else? |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="b1b29e9c9dfb21ca-6ad21982-4df64bcf-ac21843d-5c6806796a5e0bc022102f59"><ac:plain-text-body><![CDATA[ |
|
| codingscheme["VocabularyDomain"].association["hasSubtype"].targetconcept = vocDomain | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6c6e7bf512646662-d953b3ed-46ab431d-a1909b6f-01381987d76ce566c537533d"><ac:plain-text-body><![CDATA[ | VOC_code_reference | usedToBuildValueSet | with(valueDomain[registeredName=current()/.]) | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| referencesConceptCode | ...valueDomainEntry/conceptCode | 1) id is synthesized |
|
| ||
| referencesInternalId | None | Internal id's aren't exposed in lexGrid |
|
| ||
| relationship | ...valueDomainEntry/includeChildren = (relationship == 'hasSubtype') | Won't deal w/ non-hasSubtype relationships, but HL7 doesn't have any. |
|
| ||
| includeReferencedCode | ...valueDomainEntry/isSelectable | No notes | Not in current implementation |
| ||
| leafOnly | None | Not used in HL7 Model |
|
| ||
| directChildrenOnly | None | Not used in HL7 Model |
|
| ||
| isHeadCode | None | Only used when referenced in VOC_value_set_constructor. |
|
| ||
| referencesCodeSystem | .../valueDomainEntry.codingScheme | Shortcut in HL7 model. Must = VOC_value_set.basedOnCodeSystem |
|
| ||
| arbitraryUniqueValue() | .../valueDomainEntry.id | Notes |
|
| ||
VOC_registered_code_system | codeSystemId | None | VOC_registered_code_system isn't currently transferred to Lexgrid |
|
| ||
| sponsor | None | No notes |
|
| ||
| publisher | None | No notes |
|
| ||
| versionReportingMethod | None | No notes |
|
| ||
| licensingInformation | None | This field should really be transfer to copyright? |
|
| ||
| inUMLS | None | No notes |
|
| ||
| systemSpecificLocatorInfo | None | No notes |
|
| ||
| uri | None | No notes |
|
| ||
| isExternal | None | No notes |
|
| ||
VOC_value_set | valueSetId | valueDomain.registeredName | No notes |
|
| ||
| valueSetName | valueDomain.valueDomain | Name is the key in LexGrid, and is optional in HL7 - will need to be addressed. |
|
| ||
| basedOnCodeSystem | valueDomain.defaultCodingScheme | Optional in HL7, required in LexGrid. |
|
| ||
| description | valueDomain.entityDescription | No notes |
|
| ||
| definingExpression | None | Not used. |
|
| ||
| allCodes | None | No notes |
|
| ||
| isTaxonomicSet | None | No mapping available |
|
| ||
| valueSetAuthority | None | Included in valueSetID |
|
| ||
| valueSetNumber | None | No notes |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="618670f9408e8482-8143af30-4e2b49a1-b880854e-1555d566f6bc3942468638b3"><ac:plain-text-body><![CDATA[ | VOC_value_set_constructor | usedToBuildValueSet | new valueDomainEntry(parent = valueDomain[valueSetId=current()/.],id=unique()) | No notes |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
| includesOrExcludesSet | valueDomainEntry.includesValueDomain | No notes |
|
| ||
| includeHeadCode | valueDomainEntry.isSelectable | No notes |
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="4aa68ec841019e80-2761bd36-4ec44ddb-a66a958e-b96b77f6ca34e099a79f8365"><ac:plain-text-body><![CDATA[ |
|
| valueDomainEntry.conceptCode = VOC_code_reference[usedToBuildValueSet=current().usedToBuildValueSet and isHeadCode=true].referencesConceptCode | Assumes that there always is a head code. |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
VOC_vocabulary_domain_value_set | representsVocDomain | (selector) |
|
|
| ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="9e92b42763d2ed2d-f0ffde89-4f974030-87b390ce-a5b22017aafc9d2a5fcaade0"><ac:plain-text-body><![CDATA[ |
| definedByValueSet | codingscheme['VocabularyDomain'].concept[representsVocDomain].property['definedByValueSet'].text | have to get 'representsVocDomain' into supportedProperty header |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="7cada077435baf93-5ff4ba0d-44854920-bf608420-a1329b441c2e52bcd7f4bf46"><ac:plain-text-body><![CDATA[ |
| appliesInContext | codingscheme['VocabularyDomain'].concept[representsVocDomain].property['definedByValueSet'].usageContext | Have to get all the contexts in the VocabularyDomain supportedContext header |
|
| ]]></ac:plain-text-body></ac:structured-macro> |
VCS_release_version | releaseId | codingSchemeVersion.version | Note: this is not the way that things are done at the moment. At the moment, VCS_release_versions are loaded into systemRelease. Entered if one or more concept/relationship change. |
|
| ||
|
| valueDomainVersion.version | Set iff one or more value sets change |
|
| ||
| literal("false") | codingSchemeVersion.isComplete | All versions are delta's in this model |
|
| ||
| releaseAgency | None | No notes |
|
| ||
| releaseDate | codingSchemeVersion.versionDate | No notes |
|
| ||
| valueDomainVersion.versionDate | None | No notes |
| |||
| description | codingSchemeVersion.entityDescription | No notes |
|
| ||
| valueDomainVersion.entityDescription | None | No notes |
| |||
| editorID | None | There is no place for these currently. |
|
| ||
| forWhomID | None | There is no place for these currently. |
|
| ||
| concat('urn:oid:2.16.840.1.113883:',systemRelease.releaseId) | None | This corresponds to the containing system release when the sytem release occurs. It is empty until then. |
|
|
...
Source Definition | Column | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | Comments | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Line | 1 | <codingSchemeName> | <codingSchemeId> | <defaultLanguage> | <formalName> | version |
| description | copyright | This must be the first line. It contains the coding scheme metadata. | ||
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0a21b330b4c9fe8e-b45781f3-49d14b7c-95f59fa5-f23e953e38a8b270d718b412"><ac:plain-text-body><![CDATA[ | Line | 2 | [<code>] | <name> | description | None | None | None | None | None | Beginning of concepts in coding scheme. | ]]></ac:plain-text-body></ac:structured-macro> |
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="0460def85f4b70e0-09cfa922-44094395-b7ea8dc0-70a9642b7ac25745122277e3"><ac:plain-text-body><![CDATA[ | Line | 3 | [<code>] | <name> | description | None | None | None | None | None | Represent hierarchical 'hasSubtype' relationship nesting (name hasSubtype name) | ]]></ac:plain-text-body></ac:structured-macro> |
...
concept.presentation.propertyName (inherited from Property) Propert
SRFLD
