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Need Help Getting Started?
The LexGrid/LexBIG/EVS
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world
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is
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a
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big
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place
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and
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can
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be
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an
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interesting
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experience
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for
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new
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users.
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Following
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are
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some
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links
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to
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help
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assist
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with
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navigation.
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And,
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of
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course,
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if
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you
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don't
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find
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what
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you
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need,
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feel
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free
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to
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submit
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questions,
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comments,
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or
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concerns
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using
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the
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.
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Pages
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are
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continuously
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being
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enhanced
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and
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improved
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in
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order
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to
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provide
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a
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better
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experience.
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Start
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from
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a
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Goal
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or
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Task
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What
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Would
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You
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Like
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to Do
- Learn more about LexEVS
- Browse a vocabulary that is already published
- Integrate a vocabulary into an application or program
- Review the following sections of the LexEVS 5.0 Programmer's Guide
- Interfaces
- Search Paradigm
- Distributed LexBig API Examples of Use
- Analytical Grid Service Code Examples
- See the following Code examples
- Review the JavaDocs
- For existing EVS programmers, visit the LexEVS 5.x Migration Guide
- Review the following sections of the LexEVS 5.0 Programmer's Guide
- Publish a vocabulary for access by others
- Refer to the following sections of the LexEVS 5.0 Installation Outline
- For supported vocabulary formats (OWL, UMLs, OBO, etc):
- Review the LexEVS 5.x Administration Guide
- Within the Admin guide see the section on Vocabulary Administration in LexEVS
- For unsupported formats: Visit the LexGrid model and XML schema/loader (for transform) - LexGrid Model and Schema
Start from Your Role
How Will You Be Working With LexEVS?
- System Administrator
- See the LexEVS 5.x Administration Guide
- To access the deployment files navigate to LexEVS 5.0 Components
- Application Programmer
- Viewing the following is recommended:
- LexEVS 5.0 Programmer's Guide
- LexEVS 5.x Installation Guide
- Deployment files: LexEVS 5.0 Components
- For existing EVS programmers, LexEVS 5.x Migration Guide
- Viewing the following is recommended:
- Vocabulary User
- For examples of querying vocabulary see the example LexEVS Queries in the Example LexEVS Queries section of the LexEVS 5.0 Programmer's Guide
- Visit any or all of the browsers: NCI Term Browser, NCI Thesaurus Browser and the NCI Metathesaurus Browser
- Review the following published paper: LexGrid: A Framework for Representing, Storing, and Querying Biomedical Terminologies from Simple to Sublime
- Review the following educational paper: Desiderata for Controlled Medical Vocabularies in the Twenty-First Century
Start from a Community of Interest
What Content or Specifications Are of Interest to You?
- Health Level 7 (HL7)
- Unified Medical Language System (UMLS)
- Vocabulary Administration in LexEVS
- Within the LexEVS 5.0 Design and Architecture Guide see the section on UMLS Mapping
- Open Biomedical Ontologies (OBO)
- Vocabulary Administration in LexEVS
- Within the LexEVS 5.0 Design and Architecture Guide see the section on OBO Mapping
- Web Ontology Lanaguage (OWL)
- Vocabulary Administration in LexEVS
- Within the LexEVS 5.0 Design and Architecture Guide see the section on OWL mapping
External Links to Communities
- Health Level 7 (HL7)
- Unified Medical Language System (UMLS)
- Open Biomedical Ontologies (OBO)
- W3C OWL Web Ontology Language
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Do*
* [Learn more about LexEVS|Learning About LexEVS 5.0]
* [Browse a vocabulary that is already published|LexEVS Accessing Vocabularies to Include]
* *Integrate a vocabulary into an application or program*
** Review the following sections of the [LexEVS 5.0 Programmer's Guide]
*** Interfaces
*** Search Paradigm
*** Distributed LexBig API Examples of Use
*** Analytical Grid Service Code Examples
** See the following [Code examples|http://gforge.nci.nih.gov/docman/view.php/491/17544/LexEVS_50_Example_Code.zip]
** Review the [JavaDocs|https://gforge.nci.nih.gov/docman/view.php/491/17174/LexEVS_50_JavaDocs.zip]
** For existing EVS programmers, visit the [LexEVS 5.x Migration Guide]
* *Publish a vocabulary for access by others*
** Refer to the following sections of the [LexEVS 5.0 Installation Outline]
*** [Local Node Installation|LexEVS 5.0 Installation Outline#Local Node Installation]
*** [Web-Enabled Node Installation|LexEVS 5.0 Installation Outline#Web-Enabled Node Installation]
*** [Web-Enabled Applications and Extensions|LexEVS 5.0 Installation Outline#Web-Enabled Applications and Extensions]
*** Review the [LexEVS 5.x Installation Guide]
** For supported vocabulary formats (OWL, UMLs, OBO, etc):
*** Review the [LexEVS 5.x Administration Guide]
*** Within the Admin guide see the section on [Vocabulary Administration in LexEVS|LexEVS 5.x Administration Guide#Vocabulary Administration]
** For unsupported formats: Visit the LexGrid model and XML schema/loader (for transform) - [LexGrid Model and Schema]
h2. Start from Your Role
*How Will You Be Working With LexEVS?*
* System Administrator
** See the [LexEVS 5.x Administration Guide]
** To access the deployment files navigate to [LexEVS 5.0 Components]
* Application Programmer
** Viewing the following is recommended:
*** [LexEVS 5.0 Programmer's Guide]
*** [LexEVS 5.x Installation Guide]
*** Deployment files: [LexEVS 5.0 Components]
*** For existing EVS programmers, [LexEVS 5.x Migration Guide]
* Vocabulary User
** For examples of querying vocabulary see the example LexEVS Queries in the Example LexEVS Queries section of the [LexEVS 5.0 Programmer's Guide]
** Visit any or all of the browsers: [NCI Term Browser|http://nciterms.nci.nih.gov/], [NCI Thesaurus Browser|http://nciterms.nci.nih.gov/NCIBrowser/Dictionary.do] and the [NCI Metathesaurus Browser|http://ncimeta.nci.nih.gov/MetaServlet/]
** Review the following published paper: [LexGrid: A Framework for Representing, Storing, and Querying Biomedical Terminologies from Simple to Sublime|http://www.jamia.org/cgi/content/abstract/16/3/305]
** Review the following educational paper: [Desiderata for Controlled Medical Vocabularies in the Twenty-First Century|http://reference.kfupm.edu.sa/content/d/e/desiderata_for_controlled_medical_vocabu_36284.pdf]
h2. Start from a Community of Interest
*What Content or Specifications Are of Interest to You?*
* Health Level 7 (HL7)
** [Vocabulary Administration in LexEVS|LexEVS 5.x Administration Guide#Vocabulary Administration]
** Within the [LexEVS 5.0 Design and Architecture Guide] see the section on [HL7 RIM Mapping|LexEVS 5.0 Design and Architecture Guide#HL7 RIM Mapping]
** [Common Terminology Services 2 (CTS2)|http://hssp.wikispaces.com/cts2]
* Unified Medical Language System (UMLS)
** [Vocabulary Administration in LexEVS|LexEVS 5.x Administration Guide#Vocabulary Administration]
** Within the [LexEVS 5.0 Design and Architecture Guide] see the section on [UMLS Mapping|LexEVS 5.x Design and Architecture Guide 1 - Introduction#UMLS Mapping]
* Open Biomedical Ontologies (OBO)
** [Vocabulary Administration in LexEVS|LexEVS 5.x Administration Guide#Vocabulary Administration]
** Within the [LexEVS 5.0 Design and Architecture Guide] see the section on [OBO Mapping|LexEVS 5.0 Design and Architecture Guide#OBO Mapping 2]
* Web Ontology Lanaguage (OWL)
** [Vocabulary Administration in LexEVS|LexEVS 5.x Administration Guide#Vocabulary Administration]
** Within the [LexEVS 5.0 Design and Architecture Guide] see the section on [OWL mapping|LexEVS 5.0 Design and Architecture Guide#OWL Mapping - 5.0]
h2. External Links to Communities
* [Health Level 7 (HL7)|http://www.hl7.org/]
* [Unified Medical Language System (UMLS)|http://www.nlm.nih.gov/research/umls/]
* [Open Biomedical Ontologies (OBO)|http://www.obofoundry.org/]
* [W3C OWL Web Ontology Language |http://www.w3.org/TR/owl-features/]
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