NIH | National Cancer Institute | NCI Wiki  

Error rendering macro 'rw-search'

null

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Adjusted misplaced <em> tags.

...

Term Source Name---The name of the source from where a term is selected and referenced in the ISA-TAB-Nano files. The source could be an ontology or a controlled vocabulary. The source name is the full name or the acronym of the ontology/controlled vocabulary. This is a required field if the term source name is referenced in any of the ISA-TAB-Nano files.

T erm Term Source File--- A file name or a URI of the source named in the Term Source Name field.

...

Study Disease Term Accession Number---Identification number of a term selected from an ontology or a controlled vocabulary, if the term is entered as a value for S tudy Study Disease. (ISA-TAB Extension for ISA-TAB-Nano)

...

Study Assay Measurement Type Term Source REF---The name which identifies the source from where the term for Study Assay Measurement Type is selected. This name should match one of the names entered in the Term Source Name field.

...

Study Protocol Parameters Name Term Source REF---The name which identifies the source from where the term for Study Protocol Parameter Name. This name should match one of the names entered in the Term Source  Name Source Name field.

Study Protocol Components Name--- A semicolon-delimited (";") list of names identifying the components of a protocol. Component names include instrument names, software names, and reagent names.

...

Study Protocol Components Type Term Source REF--- The name which identifies the source from where the term for Study Protocol Component Type is selected. This name should match one of the names entered in the Term Source  NameSource Name field.

Study Contacts

This section allows the identification of the point of contact for a study. An example of the STUDY CONTACTS section is in TABLE 12 on the Investigation File Example page. The STUDY CONTACTS section has 11 ISA-TAB concepts.

...

Study Person Roles Term Source REF--- The name which identifies the source from where the term for Study Person Role is selected. This name should match one of the names entered in the Term Source  NameSource Name field.

Files

The Investigation File Examples, Template, and Glossary are listed here.

...