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Page History
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| Name | Role | Present |
|---|---|---|
| Wright, Larry | NIH/NCI | x |
| Fragoso, Gilberto | NIH/NCI | x |
De Coronado, Sherri | NIH/NCI | x |
Safran, Tracy | NIH/NCI | x |
| Ong, Kim L | IS | x |
| Lucas, Jason R | IS | x |
| Bauer, Scott | Mayo | x |
| Peterson, Kevin | Mayo | x |
| Stancl, Craig | Mayo | x |
| Wynne, Robert | NIH/NCI | x |
| Brem, Larry | NIH/NCI [C] | x |
| Pan, JJ | NIH/NCI [E] | x |
| Tran, Tin | NIH/NCI [C] | x |
| Kanjamala, Pradip | Mayo | x |
| Ahmed, Shamim | NIH/NC [C] | |
| Haber, Margaret | (NIH/NCI) | |
| Roth, Laura | (NIH/NLM) | |
| Ramani, Vivek | (NIH/NCI) [C] | |
| Carlsen, Brian | (NIH/NCI) [C] | |
| Wong, Joanne | x | |
Kuntipuram, Kumar |
Action Items
| # | Assigned | Description | Date Identified | Due Date | Date Completed | Status |
|---|---|---|---|---|---|---|
| 1 | Kumar | Schedule closure meeting for GitHub migration | done | |||
| 3 | Craig Stancl, Kevin Peterson |
| July 9 | July 30 | done | |
| 10 | Kevin, Tracy, Rob |
| open | |||
| 23 | Scott | Report on property qualifiers in the HL7 MIF content in LexEVS | done | |||
| 27 | Larry, Kim | Check with the developers of the FDA application about the supplementary data for the MedDRA load | open | |||
| 28 | Rob | Submit a ticket for corrected database configuration for Meta and Resolved Value Set loads. | opendone | |||
| 29 | Scott | Push out a new lbRuntime to the NCI ftp site | done | |||
| 30 | Kevin | Check in the latest MedDRA security jar | done | |||
| 31 | Craig | Correct the project plan to show the proper date for the Readiness Review | done | |||
| 32 | Scott | Level of effort for updating 5.1, 6.0, 6.1 to Java 1.7 | done | |||
| 33 | Kevin | Send email with latest Mayo Maven NCI mirror. | pending | |||
| 33 | Log into loader server to find out what is wrong with the script parameters | pending | ||||
| 34 | Larry Brem | To follow up on the work being done on the LexEVS Nexus proxy | open | |||
| 35 | Kevin | Refine MedDRA security error message | open | |||
| 36 | Craig | Follow up on demo of MIF value sets when Harold returns | open | |||
| 37 | Tracy | To reload OWL2 and MedDRA as needed | open | |||
| 38 | Kevin | Follow up on shortened URL issue for GitHub Migration | open | |||
| 39 | Kevin | Demo of REST service exposed in Mayo value set browser | open | |||
Progress
| Area of Interest | Details | ||
|---|---|---|---|
| Nexus LexEVS repository for maven on informatics cannot be used by the Anthill Pro build. | This will need to be proxied or the artifacts will need to be moved to the NCI Nexus server | ||
| Downsides to moving the CTS2 repositories into the NCIP channel. Effort required. (Complete for projects) (Larry Brem) | N/A | ||
| Update on testing for Resolved Value Sets (Tracy) (Did the RemoveScheme.sh Script work?) | All are loaded, investigating performance issues. Kevin to look at load server to look at problems with the scrips. Also look at search code as provided by Tracy. | ||
| Security for NCI REST services (CTS2) (Kevin, NCI) | Discussed the ability to pass a token in the REST. Medra can be filtered out on the calls. However, we lose track of things when we expose value set content (some Medra concepts in a value set). For Medra we can validate the token. (bulk download) SNOMED, just presents the license to the user, but no filter on the API. No other sources cause concerns. The export REST functionality does allow the download of everything (entire, or branch of). Would like to bock export for Meta and require token for Medra. Action: Kevin to determine how long this activity will take and we will incorporate this into the project plan. | ||
| MIF Loader Value Sets | Harold and Kevin have stood up a CTS2 Implementation that contains the HL7 MIF Value Sets. Is there a way we can incorporate this service in to the NCI services. Would like to see a demo and discussion with Harold about the usage. | ||
| MIF Loader Hierarchy | |||
| status update. (NCI) | Currently waiting for a decision. Will Systems allow our informatics repo to be proxied. Larry Brem to follow up. Sarah may be working on moving this now. This is a blocking issue. | ||
| Resolved Value Sets performance issue update. Search Code provided by Tracy. (Kevin) | Value sets loaded as coding scheme. Does searching against these degrade performance on the DEV server? Kevin did a comparative test. The difference is a couple of hundred milliseconds between value set and coding scheme type searches. Content and memory are about the same. Lucene indexes on the network shares may be causing problems. Remote API was used for Kevin's testing. | ||
| Security for NCI REST services (CTS2) - block export of Meta and require token to query Medra. Complete and checked in but not deployed. (Kevin) | MedDRA is automatically excluded without the token in export results. MetaThesaurus is also excluded for export. Invalid token will have the same message as no token. Kevin will make a change to refine error message on this item. | ||
| MIF Loader Value Sets - demo and discussion (Harold) about usage (Craig) | No demo available in the near term as Harold is currently travelling. Craig to follow up when he returns. | ||
| MIF Loader Hierarchy (Gilberto) | Will leave this on the list to be followed up. | ||
| Update on Content Loads (Medra, OWL2, HL7, etc) Update on Content Loads and Deployment on Dev. Will need to be done on the 26th. What is remaining? (Tracy, Kevin, Craig) | Resolved value sets are loaded. Maven respository needs to be resolved. Can start doing testing before BDA. Medra Loader - needs to confirm latest was built. Pradip is still working on the OWL2 loader. | ||
| Meta Loader confirmation. (validation of the column size fix) | Tracy updated the lock wait and the successful loads. | ||
| Will reload OWL2 and MedDRA. (Tracy) | |||
| Check with the developers of the FDA application about the supplementary data for the MedDRA load (Larry, Kim) | The supplementary data will not be loaded. | ||
| Submit a ticket for corrected database configuration for Meta and Resolved Value Set loads. (Rob) | Lock wait timeout ticket submitted and complete. | ||
| Tracy to check on the current load to see if it was taken care of after Linda's changes were deployed | |||
| Completion of Medra Security Jar - Update (Kevin) | This is only on 6.1 at present. Mayo to rebuild or replace on 6.0 and 5.1 as necessary. | ||
| GitHub Migration Closure Meeting Update (Kevin) | Kevin has worked through most of the list. Shortened URL's – the wiki pages will allow you to link to a page and that will be a shortened URL. Switched to three clause license on everything except for LexEVS. Kevin to follow up on URL's | ||
| When can we schedule the 6.0 and 6.1 jars for MSSO validator. | This jar is on the ftp site. Expectation is that we'd give them the WAR file with the jar swapped. Mayo to follow with commits to all new rebuilds. | ||
| How will we surface the new REST functionality | Easiest to have a Mayo value set browser point back to the NCI rest service. Kevin, Craig to follow up with a demo. | ||
| Current 6.0 Grid Services are being served up. | Do we need to build any new Grid services for 6.1. Evidence is that this does not have users. | Medra Security Jar |
JIRA Issues
| Issue Number | Description | Status |
|---|---|---|
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