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NameRolePresent
Wright, Larry NIH/NCI   x
Fragoso, Gilberto NIH/NCI     x

De Coronado, Sherri    

NIH/NCI    x

Safran, Tracy

NIH/NCI    x
Ong, Kim L
IS x
Lucas, Jason R
IS x
Bauer, Scott  Mayo x
Stancl, Craig
Mayo x
Endle,  CoryMayo x
Wynne, Robert    NIH/NCI x
Tran, Tin    NIH/NCI [C]  x
Carlsen, Brian (NIH/NCI) [C] 
Wong, Joanne   

Kuntipuram, Kumar

  x

Action Items

 #AssignedDescriptionDate IdentifiedDue DateDate CompletedStatus
293JasonCheck into Mayo being designated a trusted site2015.06.03  open

Progress

  
Scott
  • Sprint 78
  • On going SupportSprint 8 Planning

Cory
  • Sprint 78
  • On going Support
  • Sprint 8 Planning
CraigSprint 7
  • Sprint 8 Planning
  • Agile Admin

Agenda

NCI Tracker

Sprint Status

Current Sprint - Sprint 7 8 (June 24July 9, 2015 - July 822, 2015)

LexEVS 6.4 Agile Development - Sprint Status

Sprint Planning

- Sprint 8 Planning

Upcoming Sprint - Sprint 8 (July 9, 2015 - July 22, 2015)

LexEVS 6.4 Agile Development - Sprint Status

Issue Grooming

 

Sprint Planning

Issue Prioritization

Recent LexEVS Related Bugs and Features (within last week)

Prioritize JIRA issues

Jira
serverNCI Tracker
columnskey,summary,type,created,reporter,priority,status,versions,labelsfixversions
maximumIssues20
jqlQueryproject = LEXEVS and fixVersion=6.4 AND issuetype = Bug AND status = Open AND (TYPE = bug or TYPE = "new feature") AND created >= 2015-07-08 AND created <= 2015-07-15
serverId7954a81f-12da-3366-a0ef-97c806660e7c

LEXEVS-946 -  Associated with this issue, any vocab with multiple name spaces isn't working.

If we were to fix OWL2 to work for any OWL1 load, this would potentially time consuming with all the loads and verification.

NCI's concern is that we may have to implement the solution twice with the original plan.

Hierarchy's for these vocabularies hasn't been displayed for a long time.

The decision is to do the OWL2 investigation (LEXEVS-985) in this sprint.

6.3 Deployment Status

  • NCI Maven Mirror Update

We built this service and gave to NCI the war file.  They have deployed to the DEV service.

Cory will verify the service is working as expected.

CTS2 Doc Service - NodeJS/NPM versions

  • Heroku service life
  • Upgrade to latest IO docs

There is an security issue with the current version of node.js and npm that is being used.  When time permits, we will upgrade to the latest versions. 

This will also force us to upgrade IOdocs and the cts2 service configuration file.

We will continue to keep the heroku site running in the meantime.

Discuss new search issues - Status (CoryRecent CTS2 Service Related Issues (within last week)

Jira
serverNCI Tracker

serverId7954a81f-12da-3366-a0ef-97c806660e7c
keyNCITERM-679
Jira
server
columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
maximumIssues20
jqlQueryproject = LEXEVSCTS2 AND created >= 2015-07-08 AND created <= 2015-07-15
serverId7954a81f-12da-3366-a0ef-97c806660e7c

keyNCIM-204

LEXEVS-1017 and LEXEVS-1029 should be worked on as part of 6.4.


Issue Grooming

Prioritize JIRA issues (fix version 6.4)

Jira
serverNCI Tracker
columnskey,summary,type,created

,updated,due,assignee

,reporter,priority,status,

resolution

labels
maximumIssues20
jqlQueryproject = LEXEVS and fixVersion=6.4 AND issuetype = Bug AND status = Open
serverId7954a81f-12da-3366-a0ef-97c806660e7c

keyLEXEVS-986

literalContains is the match algorithm that would need to be used if searching for special characters.

There may be performance hits when using this algorithm.

We could consider using literalContains in the browser only when special characters are entered.

Kim will evaluate the performance of using the literalContains algorithm in the browser.

Multi-Index Prototype Status

  • Results (Scott)

Prototype is complete and have results to review.

Times shown are better for many areas. 

For multi-index searching, results were slightly higher, but still < 100 ms.

Two questions from NCI came up:

  • Will the performance hold up when we use real data.
  • When we go to a multi user environment and multi queries, will the performance hold up?

Local XSD Resolution

  • Resolution and Priority (Scott)

LEXEVS-1029 was worked on to put in a temporary fix.

NCI has suggested to just point at a local copy of the XSDs being that they don't change often.

We should complete this issue in 6.4.

6.3 Deployment Status

  • NCI Maven Mirror Update (Cory)

CTS2 framework 1.2.0.FINAL on Informatics maven and build works against this.

NCI's Nexus server is no longer blocking the Mayo Nexus Proxy after a restart.

The goal is for NCI to be able to build lexevs CTS2 service. Mayo will put the correct CTS2 framework 1.2.0.RC1 artifacts on maven to allow NCI to mirror and build.

lexevs-service has be successfully deployed / tested on QA.

OBI Load

  • Update and next steps (Scott)

The OWL1 source was successfully loaded with OWL2 loader.

Scott to send the output from the load to NCI to review the hierarchy.

Possibly note that the content that is too long has a truncated marker on it.

May need to fix the inverse properties.  Inner classes (inverse properties) are not being parsed.

CTS2 Doc Service - NodeJS/NPM versions

  • NCI Tech Stack (Gilberto)

The NCI infrastructure group will not support Redis.  If we add Redis, NCI will need to support the entire server upgrade/maintenance.

MongoDB will be supported.  Redis will not be supported.

Our CTS2 service API docs can run without Redis when we upgrade to the latest Node.js and NPM.

Gilberto will follow up if Node.js and NPM will be supported

MRMap content  - Status (Scott)

Scott has implemented and checked in a fix for this issue.

Brian can show us what the load looks like in the SNOMED tool in a future meeting.

We will need to determine what parts to use in the browser now..

Model changes may be needed for some further MRMAP changes.

VPN and network evaluation

  • Update from Gilberto and Jason
No  No updates from Mark.  Jason will follow up with him.

External Request

  • ?

U of Michigan asked for a list of LexEVS users. 

 

JIRA Issues

Recent LexEVS Related Bugs and Features (within last week)

Jira
serverNCI Tracker
columnskey,summary,type,created,reporter,priority,status,versions,fixversions
maximumIssues20
jqlQueryproject = LEXEVS AND (TYPE = bug or TYPE = "new feature") AND created >= 2015-07-01 08 AND created <= 2015-07-08 15
serverId7954a81f-12da-3366-a0ef-97c806660e7c

...

Jira
serverNCI Tracker
columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
maximumIssues20
jqlQueryproject = LEXEVSCTS2 AND created >= 2015-07-01 08 AND created <= 2015-07-08 15
serverId7954a81f-12da-3366-a0ef-97c806660e7c

...