NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

NameRolePresent
Wright, Larry NIH/NCI   x
Fragoso, Gilberto NIH/NCI     

De Coronado, Sherri    

NIH/NCI    

Safran, Tracy

NIH/NCI    x
Ong, Kim L
IS x
Lucas, Jason R
IS x
Bauer, Scott  Mayo x
Stancl, Craig
Mayo x
Endle,  CoryMayo x
Wynne, Robert    NIH/NCI x
Tran, Tin    NIH/NCI [C]  x
Carlsen, Brian (NIH/NCI) [C] 
Wong, Joanne   

Kuntipuram, Kumar

  x

Action Items

 #AssignedDescriptionDate IdentifiedDue DateDate CompletedStatus
293JasonCheck into Mayo being designated a trusted site2015.06.03  open

...

Sprint Status

Current Sprint - Sprint 13 (September 17, 2015 - September 30, 2015)

LexEVS 6.4 S13-500 Agile Development - Sprint StatusStatus#SprintStatus-Sprint13

Sprint Planning

Issue Prioritization

Recent LexEVS Related Bugs and Features (within last week)

Jira
serverNCI Tracker
columnskey,summary,type,created,reporter,priority,status,versions,fixversions
maximumIssues20
jqlQueryproject = LEXEVS AND (TYPE = bug or TYPE = "new feature" or TYPE ="Improvement" or TYPE ="Inquiry") AND created >= 2015-09-17 AND created <= 2015-09-30
serverId7954a81f-12da-3366-a0ef-97c806660e7c

 

LEXEVS-1194 -Should we (LexEVS) define a default entity type if the source hasn't asserted a specific type?  

Kim is suggesting a convention that LexEVS default the entity type.

A default entity type could be specified in a loader preference file.

TODO - update the JIRA issue with the above comments.

 

LEXEVS-1192 - Need to look at putting on the schedule to fix in upcoming sprint.

 

Recent CTS2 Service Related Issues (within last week)

Jira
serverNCI Tracker
columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
maximumIssues20
jqlQueryproject = LEXEVSCTS2 AND created >= 2015-09-17 AND created <= 2015-09-30
serverId7954a81f-12da-3366-a0ef-97c806660e7c

 


Issue Grooming

Prioritize JIRA issues (fix version 6.4)

Jira
serverNCI Tracker
columnskey,summary,type,created,reporter,priority,status,labels
maximumIssues20
jqlQueryproject = LEXEVS and fixVersion=6.4 AND issuetype = Bug AND (status = Open or status = "Reopened")
serverId7954a81f-12da-3366-a0ef-97c806660e7c

 

MeDRA Loader

Need an evaluation/initial planning to determine next steps.

TODO: create JIRA items for the MeDRA evaluation and load.

RRF loader and the native loader are different.

TODO: look through old JIRA items for MeDRA issues and see what additional changes may be needed.

Lucene 5.2.1 Implementation Demos/Review

We will soon have some code available for NCI to review/test.  This will give NCI a chance to see how searching/sorting is being done with the new Lucene implementation. 

We may look at installing on NCI DEV instance.  We could push changes as new features are completed.

Rob mentioned we could use DATA DEV server.

TODO:  create JIRA story to show demo

Search Algorithm Discussion

  • Scoring and ordering results
  • Start to document

There are some pre and post operations that after the analyzers are set.  This affects the query results.

We will need to document this and review it with NCI for approval.

There is concern about breaking backwards compatibility with these searches bringing back different search results.

In 6.3 all searches (including literal searches) were case in-sensitive

We should continue to have all searches be case in-sensitive. (exception: code fields are case sensitive)

 

Algorithm Documentation:

LexEVS 6.4 Search Algorithm Implementation Details

OBI Issue Discussion 

Jira
serverNCI Tracker
columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
serverId7954a81f-12da-3366-a0ef-97c806660e7c
keyLEXEVS-1143

  • Review

1192

This was discussed above.
MeDRA issue

CTS2 was not bringing in the sources (qualifiers - complex property).   This will need to be further investigated. 

This can be done in two REST calls.  It would be nice if this could be done in one call

We reviewed the GUI and NCI agreed with the changes.

Wait until value set drop down issue is resolved.

We will need to tag this accordingly.

TODO:  Need a JIRA story doing the same change for loading value sets.

VPN and network evaluation

  • Update from Craig
Craig is still Still waiting to hear back from Mayo IT networking.

External Requests

  • ?
  • CTEP

Service URL.  Scott attempted this with 6.0 API in 6.3 is not working correctlyclient code built locally.  This came from an NCI customerran for him.

TODO: Create JIRA item for this.Scott will attempt to call CTEP to further assist.

Face-Face

November was originally discussed as a time for the face-face even though Lucene is pushed out until around May.

Items to potentially discuss at the face-face:

  • Java 8 update
  • Expand the CTS2 REST interface to potentially include associations
  • Loader issues with OWL2, MeDRA and HL7
  • GUI updates
  • RDF Triple Store or graph database LexEVS backing
  • End-user Value Set editor

Tracy suggested to include a discussion on loaders - how they currently work as well as some useful changes. 

Also, she suggested that there may be some useful changes that could be made to the GUI.

Larry suggested that the value set model that currently exists doesn't provide all of the functionality they need and that we should discuss our options.

TODO: Mayo to provide a list of topics based on the above and start to circulateLarry identified an external user and he would follow up with them to determine if there is an issue.

JIRA Issues

Recent LexEVS Related Bugs and Features (within last week)

...