NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

NameRolePresent
Wright, Larry NIH/NCI   x
Fragoso, Gilberto NIH/NCI     x

De Coronado, Sherri    

NIH/NCI    x

Safran, Tracy

NIH/NCI [C] x
Ong, Kim L
IS x
Lucas, Jason R
IS x
Bauer, Scott  Mayo x
Stancl, Craig
Mayo x
Endle,  CoryMayo x
Wynne, Robert    NIH/NCI [C] x
Tran, Tin    NIH/NCI [C]  x
Carlsen, Brian NIH/NCI [C] 
Wong, Joanne NIH/NCI [C] 

Kuntipuram, Kumar

NIH/NCI [C] x

Action Items

AssignedDescriptionDate IdentifiedDue DateDate CompletedStatus
      

...

Sprint Status

 

Current Sprint  Sprint 44 (November 23, 2016 – December 7, 2016)

16X237 Agile Development - Sprint Status#16X237AgileDevelopment-SprintStatus-Sprint44

F2F Debrief

Discussion Points:

  • We felt this was a productive face to face. 
  • The ideas here will guide us for the next yearWe have done code development work the first week.
  • We will switch gears to prep for the F2F the second half of this sprint.
Migration to MySQL 5.6
  • have to do additional planning and prioritization.
  • Some of the major focus points will be on REST, DevOps, the use of micro services, and triple stores.

Decision Points:

  • Scott to submit a ticket to request a DEV VM at NCI.

LexEVS 6.4.2 (Java 1.8)

  • Timeline discussion

Discussion Points:

  • There have been several LexEVS updates recently. 
  • We want to be considerate of the churn for the clients that will need to update.
  • We need to be at Java 8 to move to Cent OS 7.
  • The browser is not running at Java 8 yet.

Decision Points:

  • LexEVS 6.4.2 branch is running on Java 8. 
  • LexEVS-2510 fix (for the API)  will be included in the 6.4.2 branch.
  • Jason will create a ticket to start Java 8 build.

Backlog grooming discussion

  • Recent grooming performed
  • Set up meeting request
    • Mandatory attendance
    • Optional attendance

Discussion Points:

  • NCI team is willing to work with us as we groom the backlog.
  • Tracy suggested sending a list of JIRA issues ahead of time to review.
  • Start with a small group of technical developers.

Decision Points:

  • Initial backlog grooming group should contain the following: Rob, Tracy, Gilberto, Kim, Cory, Scott, Craig.
    • Gilberto and Larry can be option depending on the issues we are reviewing for the current meeting.
  • Mayo team to create a wiki that contains the list of JIRA issues we want to discuss.
  • Craig to send meeting notice out.

Sprint 45 Planning

  • Prioritize F2F issues

Discussion Points:

  • We reviewed the current items queued up for sprint 45.
  • We discussed MySQL 5.6 upgrade.  Once we verify it for performance, we can upgrade when NCI Systems team is ready.
  • Larry asked to add the value set fix (loader part of the fix) to this sprint for LexEVS 6.4.1.3.

Prioritize F2F issues

Decision Points:

Craig asked how we should start prioritizing the priority 1's.  This is what prioritization the team decided (in order):

  • Tech stack and deployment stories.
  • Value set workflow management stories to support Rob/Tracy
  • REST features to support our clients.
  • DevOps, CI server and Docker
    • These are dependent upon NCI systems.
  • Tracy and Rob mentioned that the command line script functionality is suffice for now.
    • The current admin stories are "nice to have", but not necessary
  • We found that our Docker test scripts were running MySQL 5.7.  Everything runs fine here. 
  • We also retested using 5.5 successfully.
  • We will do some MySQL 5.6 testing as time permits.
  • We asked if there is a timeline to upgrade to MySQL 5.6?

Decision Points:

  • Add this to the F2F Agenda
    • .

6.4.1.

2 Build and DeploymentStatus

3 issues

Discussion Points:

  • OWL1 loader change
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-2448
  • GUI updates
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS
    -2413
  • This and the term browser have now passed the app scan.
    • -2288
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-2459
  • Value Set load
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-2241
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-2463
    This could possibly go up to PROD in the next week.

Decision Points:

Discussion Points:

  • We will need to push 6.4.1.2 to the NCIP channel.The Mayo team will need to verify that the client is backwards compatible (would like to add the LexEVS-2510 to 6.4.1.2 and 6.4.1)

6.4.1.3 Build and Deployment

  • Status
  • 3.  But only the loader change for this issue.
  • Jira
    serverNCI Tracker
    columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
    serverId7954a81f-12da-3366-a0ef-97c806660e7c
    keyLEXEVS-24482510
    This
    • There is a loader
    change.
  • 6.4.1.4 will have valueset fixes.
Decision Points:
    • fix and and API fix for this issue.

NCI Nexus Server Migration Update

Discussion Points:

  • Working on the maven publish script and authorization issues.No updates

Decision Points:

BioMarker Discussion

Discussion Points:

  • This is present in the Metathesaurus.
  • Need to implement a new semantic type
  • Some concepts have multiple semantic types.

Decision Points:

  • Scott to create a JIRA item to track this issue.

Valueset load -

  • Added feature to tag
  • Added feature to set version

Discussion Points:

  • This code should be available in the next week.

Decision Points:

  • No updates

Decision Points:

CTS2 URLs for 6.3 and 6.4

Discussion Points:

  • No updates

Decision Points:

  • Tracy will create a ticket to have Jacob do this.
  • Jacob will start on DEV and work up the tiers.

Initial grooming

  • On Hold Issues
  • Initial Items to review

Triplestore evaluation meeting (Tuesday)

Review

Discussion Points:

  • No further discussion necessary.

Decision Points:

F2F Planning

  • Initial Items to review
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-1483
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-285
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-1110
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-809
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-961
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-911
    • Jira
      serverNCI Tracker
      columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
      serverId7954a81f-12da-3366-a0ef-97c806660e7c
      keyLEXEVS-1131

Decision Points:

  • On Hold Issues - We agreed to close them all (Resolved - Not Fixed).
    • The Mayo team will close these issues.

Discussion Points:

Decision Points:

  • Larry suggested start/stop time  9:00 - 4:30
    • We can have other meetings before/after these times if it works for the teams meeting.
        
    • There is maintenance on the red line metro  
  • Rob is out Wednesday.
  • User Group Discussion - combine? or Drop?  Larry suggested the following:
    • GCD won't be ready
    • caDSR nothing to discuss with this release
    • CTRP (clinical trial API) may be interested in a REST discussion.
      • transitive closure
      • defining associations beyond descendants and ancestors
  • Consolidate the REST API meetings to 2 hours
  • OWL and RRF Mapping Discussion - can drop to 1 hour
    LexEVS External Users 
    Team Absences

    Mayo Team

    • Cory - Nov 23 - 25
    • Scott - Nov 23 - 25Dec 9
    • Craig - Nov 11 - 16, Nov 23 - 25

    NCI

    • Tracy
      • Dec 14-16
      • Jan 9-17
      • Feb 21-24
    • Rob
      11/24-11/28
      • 12/9

      • 12/19

      • 12/23-12/27

      • 1/2/2017

    ...