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Managing Sample Characterizations | caNanoLab User's Guide| Managing Collaboration Groups
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You can also perform the following functions with a protocolpublication.
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To create a sample publication
- Choose a method of initiating the process:
- Click Publications.
- Manage Publications displays.
- Click
- To create a publication (and optionally add it to multiple samples): Click Publications. The Manage Publications page appears. Click
- Create a New Publication. The Create Publication page appears. Select a publication type.
To add a publication toAnchor Add Publication from Navigation Tree Add Publication from Navigation Tree
one sample: Search for the sample. In the search results,
click Edit. In the Navigation Tree,
click Publication. Next to the appropriate publication type, click Add. The Edit (sample name) Publication page appears.
NAVIGATION TREE GENERAL INFO COMPOSITION CHARACTERIZATION PUBLICATION
SYNTHESIS
Fill in the following information. Fields may change, depending upon your launching point and your selection of Publication Type.
Include Page Other options Other options Sample Publication Criteria Description
Publication Type*Anchor Publication Page Publication Page Include Page Publication type Publication typeSelect (or review) the type of publication from the drop-down list. Pre-selected if starting from within a sample. Publication Status* Include Page Publication status Publication status Title*
SeeEnter the title. (
Refer to PubMed ID description for how to auto-populate this field)
Year of Publication Enter the year that the publication was published. Authors
OnTo add an author to the publication, click Add.
pop-upIn the
a Firstpanel, enter
Lastthe Last Name,
Cancel or clickFirst Name, and Initials of the author. Confirm that you have read and understood the following message. Click
to save the author to the PublicationSave
from Submit Publication,.
Panel borderColor silver borderStyle solid Include Page PII - include PII - include To edit an author, click Edit, make changes to the name, and click Save. The changes are saved.
To remove an author,
Remove on the pop-upclick Edit next to the author's name, and click
Delete in the panel.
Keywords
Enter a term that can be used in a search query to find the publication. Enter one keyword on each line.
Description Enter the description for the publication.
Research Category
To select multiple categories, you can Shift-click or Ctrl-click.Include Page Research category Research category Upload
or
Enter File URLClick Browse to navigate to the publication to be associated with the sample, or enter the URL where the publication is located.
Sample Name
Click a sample name or CtrlThere are two options to add samples to a publication:
Enter one sample name per line in the Sample Name box.
OR
Click Search Samples and a list of samples appears in a list box.
ShiftSelect one or more samples. To select multiple samples, you can Shift-click or
to select more than oneCtrl-click
Click.
Click Select, and the selected samples are added to the Sample Name box.
Access to the Publication For more information, seerefer to Sharing a Publication with a User or Group or Making the Publication Public. Once you enter the appropriate information on the form, click SaveWhen you are done entering information, click Submit.
Info title My Workspace After saving, the publication is listed on My Workspace where you can manage all of your saved publications, and view any publications that a user has shared with you.
Once you save the publication, Update the Edit Publication page opens. With the appropriate security permissions you can
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Editing a Publication
To update edit a publication
- Perform a publication search.
- From the search results, click Edit in the Actions column.
From Update the Edit Publication page, edit the following information as needed.
Publication Criteria Description
Publication Type*
Include Page Publication type Publication type Review the type of publication in the drop-down list. Info The criteria displayed varies depending on the Publication Type that you select.
Publication Status*
Include Page Publication status Publication statusIn the drop-down list, review the status.
PubMed ID
PubMed ID (can be a hyperlink).
Include Page PubMed ID PubMed ID Appropriate DOI.
Title*
Enter text for the title of a publication. Select Contains (for search using partial text) or Equals (for exact text search).
Journal
Journal in which publication occurs.
Year of Publication
Year of the publication.
Volume
Volume of the publication
Start/End Page
Page range for the publication
Authors
To add an author to the publication, click Add. On In the pop-uppanel, enter a First the Last Name, Last First Name, and Initials of the author. Confirm that you have read and understood the following message. Click Cancel or click Save to save the author to the Publication.
Panel borderColor silver borderStyle solid Include Page PII - include PII - include To edit an author, click Edit, make changes to the name, and click Save. The changes are saved.
To remove an author, from Submit Publication, click Edit next to the author's name, and click Remove on the pop-up. Delete in the panel.
Keywords
Enter a one or more logical term terms that can be used to find the publication. Enter one term per line.
Description
Enter a description for the publication.
Research Category
To select multiple categories, you can Shift-click or Ctrl-click.Include Page Research category Research category Upload
or
Enter File URLClick Browse to navigate to the publication to be associated with the sample, or enter the URL where the publication is located.
Sample Name
There are two options to add samples to a publication.
Enter one sample name per line in the Sample Name box.
OR
Click Search Samples and a list of samples appears in a list box. Click a sample name or CtrlSelect one or more samples. To select multiple samples, you can Shift-click or ShiftCtrl-click to select more than one. Click Select, and the selected samples are added to the Sample Name box.
Access to the Publication
For more information, see refer to Sharing a Publication with a User or Group or Making the Publication Public. Click Update when When you are done editing the publication, click Submit.
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To search for existing saved publications
Click Publications. The Manage Publications
displayspage appears.
Click Search Existing PublicationsPublication.
Include Page Search Criteria Blank include Search Criteria Blank include From Search Publications, fill in the following information as needed.
Publication Search Options Description Publication Type
Include Page Publication type Publication type Select the type of publication from the drop-down list. Research Category
Include Page Research category Research category PubMed ID
Enter the PubMed ID, if known.
Include Page PubMed ID PubMed ID Enter the name of the digital object ID, if known.
Publication Title
Enter text for the title of a publication. Select Contains (for search using partial text) or Equals (for exact text search).
Authors
Enter the last name of an author. For more authors, add one author's last name per line.
Keywords
Enter a one or more logical term terms that can be used to find the publication. Enter one term per line.
Sample Name
Enter text for the name of a sample. Select Contains (for search using partial text) or Equals (for exact text search).
Composition
Nanomaterial Entity
Select the nanoparticle category to which the sample targeted by the search belongs. Example: Dendrimer
Functionalizing Entity
Select the functionalizing category to which the sample targeted by the search belongs.
Function
Include Page Function type Function type Click Search. The Publication Search Results openspage appears.
Publication Results
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The following table lists and describes the Publications Search Results columns. Back button include Include Page
Publications Search Results Columns | Description | Action||||||||||||
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Actions | Click View in the first column to display the publication abstract and information on the PubMed web site.
Click | + Add to Favorites to add a bookmark for the publication on your My Favorites. | Added to favorites appears in the column when the publication is successfully added.
Info | ||
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If the publication is already added as a Favorite, clicking Add to Favorites displays the <publication name> has already been added to your favorites message. |
When the system has successfully added the publication to your favorites, the Added to Favorites message appears in the column.
Bibliography InfoBibliography Information
Lists bibliography information about the publication and provides a link to the publication abstract at PubMed.gov.
Publication Type
The publication category you selected when you created the report.
Research Category
The research category you selected when you created the document. (Publications only)
Associated Sample Names
Names of sample(s) associated with the publication
Status
Review the status.
CreatedCreated Date
Date the publication was submitted
For any entry, click on the hyperlink in the Title column (first) to open the associated file.
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To search for publications associated with one or more samples
- Click Publications.
The Manage Publications displayspage appears. - Click Search for Samples by Publication.
Include Page Search Criteria Blank include Search Criteria Blank include - Enter the ID number.
From Sample Search by Publications, specify the Type of sample ID, PubMed or DOI.Enter the ID number.
- Click Search.
The Sample by Publication Search Results openspage appears.
Sample by Publication Search Results
The following table lists and describes the Sample Information by Publication Search Results columns.include
Publications Search Results Columns | Description | |
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Publication REF | Click the hyperlink to open PubMed.gov for that Publication. | |
Authors | The author(s) of the publication. | |
Title | The title of the publication. | |
Sample Composition | Click the link to open the caNanoLab Sample Composition form. | |
Sample Characterization | Click the link to the open the caNanoLab Sample Characterization form. | |
Journal | The journal where the publication was published. | |
Year | The year that the journal was published. | |
Vol( | lssLss)Pg | The volume and page number in the journal where the publication was published. |
For any entry, click on the hyperlink in the Titlethe Publication REF column (first) to open the associated file.
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Printing Publication(s) | To print the publication(s) , from the All tab publication summary, click
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Exporting Publication(s) to a Spreadsheet | To export the publication(s) to a spreadsheet | , from the All tab publication, click
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Deleting a Publication from a Sample | Deleting a publication from a sample removes its association with the open sample. The publication remains in the database and is available for other samples. To delete a publication from a selected sample
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| My Favorites displays samples, protocols, and publications that you bookmark for quick access. To add a publication to My Favorites | Perform a publication search
| +
| The <publication name> has already been added
| results row
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If you use the Publications menu, you can associate multiple samples with one publication. If you open a sample first from the Navigation Tree, you can copy the publication to additional samples the same way you copy characterizations to multiple samples. See Refer to Copying Characterizations. |
To access publications function in the Navigation Tree
- Click Samples and Search Existing Publications.Samples. The Sample Search page appears.
- Fill in criteria, and click Search. The Sample Search Results page appears.
- Click Edit in
In the search results
Action columnThe Navigation Tree appears , in the row for the sample you want to edit, click Edit. The Update Sample page appears, with the Navigation Tree on the left sidebar and . The Navigation Tree comprises functions which you can use to add annotations to the sample.
NAVIGATION TREE GENERAL INFO COMPOSITION CHARACTERIZATION PUBLICATION SYNTHESIS In the Navigation Tree, click Click Publication.
The All tab displays publications associated with the sample, and the publication identifier, title, authors and year, where appropriate. Additionally, each publication category tab displays its corresponding publications.Tip title Access to publications With read-only access, you can review a summary of the publications added to the sample on the All tab.
- To open a publication, click the Abstract/Download hyperlink.
- To add a publication to the open sample, click the Add button corresponding to the publication type on the All tab or select a publication type tab and add a publication to the sample.
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