 |
Page History
...
| Section | ||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Tool Overview
| Multiexcerpt | ||
|---|---|---|
| ||
The National Biomedical Imaging Archive (NBIA) is is a free and open-source service and a software application that enables users to securely store, search, and download diagnostic medical images, providing a searchable national repository integrating in vivo cancer images with clinical and genomic data. Using role-based security, NBIA provides web-based access to de-identified DICOM images, image markup, annotations, and rich metadata. The NBIA download package is a ZIP package that includes the NBIA application, supporting libraries, the RSNA MIRC application (with NBIA modifications), documentation, and a sample NBIA databaseidentify DICOM images. |
Along with the Clinical Trial Processor software from the Radiological Society of North America, NBIA supports customized de-identification of images. NBIA is able to integrate with other imaging applications to cull various data types, such as image annotations, clinical data, genomic data, and other research files, such as RT objects. NBIA can also federate with other instances of NBIA to support the response of multiple NBIA servers to a single query.
NCI's hosted instance of NBIA is freely available and provides researchers and clinicians with a robust DICOM archive that can securely share and access images to enhance scientific research and support clinical decision making. Anyone can deploy a local node of NBIA.
The ultimate goals of the project include:
- Creation of an imaging informatics infrastructure that provides cost-effective support for purpose-built and other databases as necessary, precluding the need to create separate infrastructure for each database.
- Development of searchable imaging reference libraries linked to clinical outcomes data to assist researchers and practitioners.
- Availability of the archive for mining and integration by the broader research and clinical community.
- Robust support for data-driven decision making in oncology and medical practice in general by clinicians throughout the world.
Installation and Downloads
NBIA Artifacts
NBIA provides a simplified approach to install on Linux and Windows platforms. Much of the installation process has been automated so that if you accept the default values, you can install NBIA by typing the single command ant. With the exception of the database, all supporting tools are automatically installed and configured as part of the installation. The installation package contains the binaries and scripts necessary to install the application and API. Refer to the Installation Guide for details.
applications through a set of APIs. For more information, see the NBIA REST API Guides
| Multiexcerpt include | ||||||
|---|---|---|---|---|---|---|
|
Installation and Downloads
Refer to Documentation is available on the NBIA wiki. There is also an NBIA GitHub repository GitHub
| Multiexcerpt include | ||||||
|---|---|---|---|---|---|---|
|
NBIA Installation Files
...
...
for more information on building and installing NBIA.
No community support is available from the NCI for NBIA.
NBIA Data Retriever 4.4 (Current Release)
The NBIA Data Retriever is an application
...
Downloader Installation Files
The Downloader is an app that allows you to download the images you have added data to your data basket. Click here
| Multiexcerpt include | ||||||
|---|---|---|---|---|---|---|
|
...
use the NBIA Data Retriever is in the TCIA Radiology Portal User's Guide. The NCI supports the current release of the NBIA Data Retriever and two previous releases. Earlier releases have been deprecated.
| Multiexcerpt | ||
|---|---|---|
| ||
|
...
|
...
...
...
...
|
...
...
...
|
...
|
...
tciadownloader_3.0-2_amd64.deb
To run this file, type the following at the command prompt:
sudo dpkg -i tciadownloader_3.0-2_amd64.deb
...
Downloader 2.0
...
...
...
TCIADownloader-2.0-1.x86_64.rpm
...
|
...
|
...
|
...
|
Documentation
Open-Source Development
Downloader 1.0
...
...
...
TCIADownloader-1.0-1.x86_64.rpm
To run this file, type the following at the command prompt:
sudo yum install TCIADownloader-2.0-1.x86_64.rpm
...
tciadownloader_1.0-2_amd64.deb
To run this file, type the following at the command prompt:
sudo dpkg -i tciadownloader_2.0-2_amd64.deb
...
Forum and Support
Support
Defects and Feature Requests
Open Source Development
Contact Application Support for information about open source development and NBIA.
Documentation and Training
Refer to NBIA Documentation.
Online help is available in the application.
No training materials are available. Refer to Presentations, Demos and Other Materials for an overview and demo.
Presentations, Demos and Other Materials
...
- Download Demo Slides – download of the PowerPoint slides for this demonstration.
...
NBIA is an open-source project with its code repository on GitHub
| Multiexcerpt include | ||||||
|---|---|---|---|---|---|---|
|
Presentations, Demos and Other Materials
- DICOM viewer links
- TCIA Data Portal four-video YouTube playlist
Multiexcerpt include MultiExcerptName ExitDisclaimer nopanel true PageWithExcerpt wikicontent:Exit Disclaimer to Include Multiexcerpt include MultiExcerptName ExitDisclaimer nopanel true PageWithExcerpt wikicontent:Exit Disclaimer to Include - ClearCanvas
Multiexcerpt include MultiExcerptName ExitDisclaimer nopanel true PageWithExcerpt wikicontent:Exit Disclaimer to Include Multiexcerpt include MultiExcerptName ExitDisclaimer nopanel true PageWithExcerpt wikicontent:Exit Disclaimer to Include - Getting started with CTP (Clinical Trials Processor)
- Web-based Tools For Imaging Research
- NBIA Mouse GBM
Integration with Other Tools
...
