NIH | National Cancer Institute | NCI Wiki  

WIKI MAINTENANCE NOTICE

Please be advised that NCI Wiki will be undergoing maintenance on Thursday, May 23rd between 1200 ET and 1300 ET.
Wiki will remain available, but users may experience screen refreshes or HTTP 502 errors during the maintenance period. If you encounter these errors, wait 1-2 minutes, then refresh your page.

If you have any questions or concerns, please contact the CBIIT Atlassian Management Team.

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

TimeItemWhoNotes
Value Set QA 
  • Lyubov approved moving on Value Set QA items Value Set Configuration and QA.docx
    • Query LexEVS value sets and compare to value_set_config.txt
    • Scan FTP and compare to value_set_config.txt
    • Expand OWL2 loader to NCIt specific with some processing steps pulled in
      • Scrub private properties - such as editor-note
    • How does LexEVS create URI? Uses publish_value_set and Concept_In_Subset to retrieve value sets. Scott will look at code base and tell us the algorithm they use. 
    • Local does this : uses hardcoded "http://evs.nci.nih.gov/" + ContributingSource + "/" +code

MDR Questions 
  • Meeting with Natalia, who is handling caDSR to MDR migration. Any questions I should put to her?
    • Where is MDR getting its EVS data? the EVS file dump for NCIt
    • What vocabularies does it use?  Just NCIt, for now. 
    • Expected lifespan of caDSR? 
      • Curation tool will shut down in ~August, when MDR goes up.
      • SIW will stay up and that uses EVS.  That provides files to UML Loader but that has no loader to MDR yet. Still unclear of future or scheduling
    • Is query that was breaking working now. Vikram working on it and doesn't think it has to do with communication with EVS. Not 100% reproducible. Huge biomarker Value Domain with 5000 objects attached to it. 
    • Do they want any hands-on help? Not at the moment.

EVS Exporter
  • Status
  • Ready for links? Not yet
  • Submitted paperwork for clearance of new applications
    • Will need to change domain to cancer.gov, perhaps
    • Would leave nci.nih.gov on lower tiers?
  • Is there a way to separate regular roles and inherited roles? 

EVS Explorer
On QA and validating

Metrics dashboard
  • I built a power point to show Lyubov what Google Analytics can do and asked her to call out what she wants on a dashboard.  She responded with GoogleAnalyticsParameters LRW1 03_11_2021.pptx
  • She wants several metrics that are not recorded by GA
    • IP Address of user
    • Resolved IP
    • Domain of user
  • She wants these user metrics that are in GA
    • Country of access
    • New or returning users
    • Frequency of return
    • Browser utilized
  • She wants the following system metrics
    • When traffic goes up or down dramatically
    • When page loads exceed a set target
    • Average page load times
  • She suggested further discussion on Google Tag Manager






...