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Comment: Migrated to Confluence 5.3

...

Note 3: The codeSystemVersionUri value is determined through a special LexEVS URI handler that is responsible for constructing URIs that represent versions from LexEVS resources.

CodeSystemVersionRead

CTS2 Interface: edu.mayo.cts2.framework.service.profile.codesystemversion.CodeSystemVersionReadService

...

Note 2: The CTS2 'codeSystemVersionName' is the only non 1-1 mapping. In CTS2, a version name is meant to be unique (even across versions) - so the LexEVS CodingSchemeName is concatenated with the LexEVS Version to get a unique name.

EntityDescriptionQuery

CTS2 Interface: edu.mayo.cts2.framework.service.profile.entitydescription.EntityDescriptionQueryService

...

Note 5: Not supported at this time and throws an UnsupportedOperationException.

Transformation Table:

...

EntityDescriptionRead

text

Service Method Mappings Table

...

CTS2 EntityDirectoryEntry ⇔ LexEVS ResolvedConceptReference

CTS2 EntityDirectoryEntry	LexEVS ResolvedConceptReference
about	entityUri (Refer to Note 1 below table

...

)

...

knownEntityDescription.

...

describingCodeSystemVersion.codeSystem	codingSchemeName
knownEntityDescription.describingCodeSystemVersion.content	codingSchemeName + '-' + codingSchemeVersion
knownEntityDescription.designation	entityDescription.content
knownEntityDescription.

Note 1: The LexEVS entityUri value is determined through a special LexEVS URI handler that is responsible for constructing URIs from the LexEVS resource.

EntityDescriptionRead

CTS2 Interface: edu.mayo.cts2.framework.service.profile.entitydescription.EntityDescriptionReadService

Implementation: edu.mayo.cts2.framework.plugin.service.lexevs.service.entity.LexEvsEntityReadService

Service Method Mappings Table

CTS2 EntityDescriptionReadService methods	LexEVS Service Implementation	LexEVS Service methods used
EntityReference availableDescriptions(EntityNameOrURI entityId, ResolvedReadContext readContext)	Refer to Note 1 below table	Not Applicable

...

boolean exists(EntityDescriptionReadId identifier, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodedNodeSet getNodeSet(String codingScheme, CodingSchemeVersionOrTag versionOrTag, LocalNameList entityTypes)
List<CodeSystemReference> getKnownCodeSystems()	Refer to Note

...

2 below table	Not Applicable
List<CodeSystemVersionReference> getKnownCodeSystemVersions()	Refer to Note 2 below table	Not Applicable
List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 2 below table	Not Applicable
List<VersionTagReference> getSupportedVersionTags()	Refer to Note 2 below table	Not Applicable
EntityDescription read(EntityDescriptionReadId identifier, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodedNodeSet getNodeSet(String codingScheme, CodingSchemeVersionOrTag versionOrTag, LocalNameList entityTypes) LexBIGServiceConvenienceMethods getGenericExtension("LexBIGServiceConvenienceMethods")
List<EntityListEntry> readEntityDescriptions(EntityNameOrURI entityId, ResolvedReadContext readContext)	Refer to Note 1 below table	Not Applicable
DirectoryResult<EntityListEntry> readEntityDescriptions(EntityNameOrURI entityId, SortCriteria sortCriteria, ResolvedReadContext readContext, Page page)	Refer to Note 1 below table	Not Applicable

Note 1: Not supported at this time and throws an UnsupportedOperationException.

Note 2: Not supported at this time and returns an empty List.

Transformation Table: CTS2 EntityDescription ⇔ LexEVS ResolvedConceptReference

CTS2 EntityDescription	LexEVS ResolvedConceptReference
namedEntityDescription.about	entityUri (Refer to Note 1 below table)
namedEntityDescription.designation.designationRole	getEntity().getPresentation().isIsPreferred() (Refer to Note 2 below table)
namedEntityDescription.designation.value	getEntity().getPresentation().getValue().getContent()
namedEntityDescription.describingCodeSystemVersion - CodeSystemVersionReference.codeSystem	codingSchemeName
namedEntityDescription.describingCodeSystemVersion - CodeSystemVersionReference. nameAndMeaningReference.content	codingSchemeName + '-' + codingSchemeVersion
namedEntityDescription.entityID.name	getEntity().getEntityCode()
namedEntityDescription.entityID.nameSpace	getEntity().getEntityCodeNamespace()
namedEntityDescription.parent - URIAndEntityName.name	per Association, the Association's AssociatedConcept.code
namedEntityDescription.parent - URIAndEntityName.nameSpace	per Association, the Association's AssociatedConcept.codeNameSpace
namedEntityDescription.parent - URIAndEntityName.uri	entityUri (Refer to Note 3 below table)

Note 1: The LexEVS entityUri value is determined through a special LexEVS URI handler that is responsible for constructing URIs from the LexEVS resource.

Note 2: The CTS2 designationRole value is determined on the LexEVS Presentation object(s) of the LexEVS Entity associated with the LexEVS ResolvedConceptReference. If the given LexEVS Presentation object is preferred then the corresponding CTS2 designationRole is set to the CTS2 DesignationRole.PREFERRED value, else it is set to the CTS2 DesignationRole.ALTERNATIVE value.

Note 3: The LexEVS entityUri value is determined through a special LexEVS URI handler that is responsible for constructing URIs from the LexEVS resource. In this case the LexEVS resource is the ResolvedConceptReference (AssociatedConcept) for a particular resolved LexEVS Association.

MapQuery

CTS2 Interface: edu.mayo.cts2.framework.service.profile.map.MapQueryService

Implementation: edu.mayo.cts2.framework.plugin.service.lexevs.service.map.LexEvsMapQueryService

Service Method Mappings Table

CTS2 MapQueryService methods	LexEVS Service Implementation	LexEVS Service methods used
int count(MapQuery query)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingSchemeRenderingList getSupportedCodingSchemes() getGenericExtension("MappingExtension") MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag) resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)
List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 1 below table	Not Applicable
Set<PredicateReference> getKnownProperties()	Refer to Note 2 below table	Not Applicable
DirectoryResult<MapCatalogEntry> getResourceList(MapQuery query, SortCriteria sortCriteria, Page page)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingSchemeRenderingList getSupportedCodingSchemes() getGenericExtension("MappingExtension") MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag) resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)
DirectoryResult<MapCatalogEntrySummary> getResourceSummaries(MapQuery query, SortCriteria sortCriteria, Page page)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingSchemeRenderingList getSupportedCodingSchemes() getGenericExtension("MappingExtension") MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag) resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)
Set<? extends MatchAlgorithmReference> getSupportedMatchAlgorithms()	Refer to Note 3 below table	Not Applicable
Set<? extends PropertyReference> getSupportedSearchReferences()	Refer to Note 4 below table	Not Applicable
Set<? extends PropertyReference> getSupportedSortReferences()	Refer to Note 2 below table	Not Applicable

Note 1: Not supported at this time and returns an empty List.

Note 2: Not supported at this time and returns an empty Set.

Note 3: Returned Set contains 3 MatchAlgorithmReference objects supporting "exactMatch", "contains" and "startsWith".

Note 4: Returned Set contains 3 PropertyReference objects supporting attributes "about", "resourceName" and "resourceSynopsis".

Transformation Table: CTS2 MapCatalogEntrySummary ⇔ LexEVS CodingScheme

CTS2 MapCatalogEntrySummary	LexEVS CodingScheme
about	codingSchemeURI (Refer to Note 1 below table)
formalName	formalName
fromCodeSystem	codingScheme.getRelations(0).getSourceCodingScheme()
mapName	codingSchemeName
resourceSynopsis	content value of codingSchemeSummary's codingSchemeDescription
toCodeSystem	codingScheme.getRelations(0).getTargetCodingScheme()

Note 1: The LexEVS codingSchemeURI value is determined through a special LexEVS URI handler that is responsible for constructing URIs from LexEVS resources.

MapRead

CTS2 Interface: edu.mayo.cts2.framework.service.profile.map.MapReadService

Implementation: edu.mayo.cts2.framework.plugin.service.lexevs.service.map.LexEvsMapReadService

Service Method Mappings Table

CTS2 MapReadService methods	LexEVS Service Implementation	LexEVS Service methods used
boolean exists(NameOrURI identifier, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)
List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 1 below table	Not Applicable
MapVersion read(NameOrURI identifier, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)

Note 1: Not supported at this time and returns an empty List.

Transformation Table: CTS2 MapCatalogEntry ⇔ LexEVS CodingScheme

CTS2 MapCatalogEntry	LexEVS CodingScheme
about	codingSchemeURI (Refer to Note 1 below table)
formalName	formalName
fromCodeSystem	codingScheme.getRelations(0).getSourceCodingScheme()
keywordList	values from the collection set of localName
mapName	codingSchemeName
properties	properties
resourceSynopsis	codingScheme.entityDescription.content.value
toCodeSystem	codingScheme.getRelations(0).getTargetCodingScheme()

Note 1: The LexEVS codingSchemeURI value is determined through a special LexEVS URI handler that is responsible for constructing URIs from LexEVS resources.

MapEntryQuery

CTS2 Interface: edu.mayo.cts2.framework.service.profile.mapentry.MapEntryQueryService

Implementation: edu.mayo.cts2.framework.plugin.service.lexevs.service.mapentry.LexEvsMapEntryQueryService

Service Method Mappings Table

CTS2 MapEntryQueryService methods	LexEVS Service Implementation	LexEVS Service methods used
int count(MapEntryQuery query)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingSchemeRenderingList getSupportedCodingSchemes() getGenericExtension("MappingExtension") MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)
List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 1 below table	Not Applicable
Set<PredicateReference> getKnownProperties()	Refer to Note 2 below table	Not Applicable
DirectoryResult<MapEntry> getResourceList(MapEntryQuery query, SortCriteria sortCriteria, Page page)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingSchemeRenderingList getSupportedCodingSchemes() getGenericExtension("MappingExtension") MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)
DirectoryResult<MapEntryDirectoryEntry> getResourceSummaries(MapEntryQuery query, SortCriteria sortCriteria, Page page)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingSchemeRenderingList getSupportedCodingSchemes() getGenericExtension("MappingExtension") MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)
Set<? extends MatchAlgorithmReference> getSupportedMatchAlgorithms()	Refer to Note 3 below table	Not Applicable
Set<? extends PropertyReference> getSupportedSearchReferences()	Refer to Note 4 below table	Not Applicable
Set<? extends PropertyReference> getSupportedSortReferences()	Refer to Note 2 below table	Not Applicable

Note 1: Not supported at this time and returns an empty List.

Note 2: Not supported at this time and returns an empty Set.

Note 3: Returned Set contains 3 MatchAlgorithmReference objects supporting "exactMatch", "contains" and "startsWith".

Note 4: Returned Set contains 3 PropertyReference objects supporting attributes "about", "resourceName" and "resourceSynopsis".

Transformation Table: CTS2 MapEntryDirectoryEntry ⇔ LexEVS ResolvedConceptReference

CTS2 MapEntryDirectoryEntry	LexEVS ResolvedConceptReference
href	Refer to Note 1 below table
mapFrom	Refer to Note 2 below table
resourceName	Refer to Note 3 below table

Note 1: the href attribute represents a MapEntry URLvalue as a String in the format: mapName/version/mapVersionName/entry/mapEntryName where mapName is the LexEVS ResolvedConceptReference.getCodingSchemeName() value, mapVersionName represents the String value concatentation of 'ResolvedConceptReference.getCodingSchemeName() + "-" + ResolvedConceptReference.getCodingSchemeVersion()', and mapEntryName is the encoded value of CTS2 MapEntryDirectoryEntry.mapFrom attribute.

Note 2: the MapEntryDirectoryEntry.mapFrom attribute represents a CTS2 UriAndEntityName object where the UriAndEntityName.name value is the LexEVS ResolvedConceptReference.getCode() value, the UriAndEntityName.nameSpace value is the LexEVS ResolvedConceptReference.getCodeNameSpace() value, and the the UriAndEntityName.uri value is determined through a special LexEVS URI handler that is responsible for constructing URIs from the LexEVS resource.

Note 3: the resourceName value is the encoded value of the CTS2 MapEntryDirectoryEntry.mapFrom attribute.

MapEntryRead

CTS2 Interface: edu.mayo.cts2.framework.service.profile.mapentry.MapEntryReadService

Implementation: edu.mayo.cts2.framework.plugin.service.lexevs.service.mapentry.LexEvsMapEntryReadService

Note 1: Not supported at this time and throws an UnsupportedOperationException.

Note 2: Not supported at this time and returns an empty List.

Transformation Table: CTS2 EntityDescription ⇔ LexEVS ResolvedConceptReference

MapQuery

CTS2 Interface: edu.mayo.cts2.framework.service.profile.map.MapQueryService

Service Method Mappings Table

CTS2 MapEntryReadService methods	LexEVS Service Implementation	LexEVS Service methods used
boolean exists(MapEntryReadId identifier, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	MappingExtension getGenericExtension("MappingExtension") Mapping MappingExtension.getMapping(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag, String relationsContainerName) Mapping restrictToCodes(ConceptReferenceList codeList, SearchContext searchContext)
List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 1 below table	Not Applicable
MapEntry read(MapEntryReadId, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	MappingExtension getGenericExtension("MappingExtension") Mapping MappingExtension.getMapping(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag, String relationsContainerName) Mapping restrictToCodes(ConceptReferenceList codeList, SearchContext searchContext)

Note 1: Not supported at this time and returns an empty List.

Transformation Table: CTS2 MapEntry ⇔ LexEVS ResolvedConceptReference

CTS2 MapEntry	LexEVS ResolvedConceptReference
assertedBy	codingSchemeName, codingSchemeVersion, codingSchemeURI (Refer to Note 1 below table)
mapFrom	Refer to Note 1 below table
mapSet	Refer to Note 2 below table
mapSet.entryOrder	is always set to value 1
mapSet.mapTarget.entryOrder	set according to the number of CTS2 MapTarget objects added to the CTS2 MapSet object
mapSet.mapTarget.mapTo	Refer to Note 3 below table
mapSet.processingRule	is always set to the CTS2 value MapProcessingRule.ALL_MATCHES
processingRule	is always set to the CTS2 value MapProcessingRule.ALL_MATCHES

Note 1: the MapEntry.mapFrom attribute represents a CTS2 UriAndEntityName object where the UriAndEntityName.name value is the LexEVS ResolvedConceptReference.getCode() value, the UriAndEntityName.nameSpace value is the LexEVS ResolvedConceptReference.getCodeNameSpace() value, and the the UriAndEntityName.uri value is determined through a special LexEVS URI handler that is responsible for constructing URIs from the LexEVS resource.

Note 2: the CTS2 MapEntry is always set to have only one CTS2 MapSet object.

Note 3: the CTS2 MapTarget.mapTo attribute represents a CTS2 UriAndEntityName object where the UriAndEntityName.name value is the LexEVS AssociatedConcept.getCode() value, the UriAndEntityName.nameSpace value is the LexEVS AssociatedConcept.getCodeNameSpace() value, and the the UriAndEntityName.uri value is determined through a special LexEVS URI handler that is responsible for constructing URIs from the LexEVS resource.

MapVersionQuery

CTS2 Interface: edu.mayo.cts2.framework.service.profile.mapversion.MapVersionQueryService

Implementation: edu.mayo.cts2.framework.plugin.service.lexevs.service.

map

mapversion.

LexEvsMapQueryService

LexEvsMapVersionQueryService

Service Method Mappings Table

CTS2

MapQueryService

MapVersionQueryService methods	LexEVS Service Implementation	LexEVS Service methods used
int count(

MapQuery

MapVersionQuery query)

org.LexGrid.LexBIG.Impl.LexBIGServiceImpl

CodingSchemeRenderingList getSupportedCodingSchemes()
getGenericExtension("MappingExtension")
MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)

resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)

List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 1 below table	Not Applicable
Set<PredicateReference> getKnownProperties()	Refer to Note 2 below table	Not Applicable

DirectoryResult<MapCatalogEntry>

DirectoryResult<MapVersion> getResourceList(

MapQuery DirectoryResult<MapCatalogEntrySummary>

MapVersionQuery query, SortCriteria sortCriteria, Page page)

org.LexGrid.LexBIG.Impl.LexBIGServiceImpl

CodingSchemeRenderingList getSupportedCodingSchemes()
getGenericExtension("MappingExtension")
MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)

resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)

DirectoryResult<MapVersionDirectoryEntry> getResourceSummaries(

MapQuery

MapVersionQuery query, SortCriteria sortCriteria, Page page)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingSchemeRenderingList getSupportedCodingSchemes() getGenericExtension("MappingExtension") MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)
Set<? extends MatchAlgorithmReference> getSupportedMatchAlgorithms()	Refer to Note 3 below table	Not Applicable
Set<? extends PropertyReference> getSupportedSearchReferences()

Refer to Note 4 below table

Not Applicable

resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)

Set<? extends

MatchAlgorithmReference> getSupportedMatchAlgorithms

PropertyReference> getSupportedSortReferences()

Refer to Note

2 below table	Not Applicable
DirectoryResult<EntityDirectoryEntry> mapVersionEntities(NameOrURI mapVersion, MapRole mapRole, MapStatus mapStatus, EntityDescriptionQuery query, SortCriteria sortCriteria, Page page)	Refer to Note 5 below table	Not Applicable

Set<? extends PropertyReference> getSupportedSearchReferences(

DirectoryResult<EntityDescription> mapVersionEntityList(NameOrURI mapVersion, MapRole mapRole, MapStatus mapStatus, EntityDescriptionQuery query, SortCriteria sortCriteria, Page page)

Refer to Note

5 below table

Not Applicable

Set<? extends PropertyReference> getSupportedSortReferences(

EntityReferenceList mapVersionEntityReferences(NameOrURI mapVersion, MapRole mapRole, MapStatus mapStatus, EntityDescriptionQuery query, SortCriteria sortCriteria, Page page)

Refer to Note

5 below table

Not Applicable

Note 1: Not supported at this time and returns an empty List.

Note 2: Not supported at this time and returns an empty Set.

Note 3: Returned Set contains 3 MatchAlgorithmReference objects supporting "exactMatch", "contains" and "startsWith".

Note 4: Returned Set contains 3 PropertyReference objects supporting attributes "about", "resourceName" and "resourceSynopsis".

Note 5: Not supported at this time and throws an UnsupportedOperationException.

Transformation Table:

CTS2 MapCatalogEntrySummary

CTS2 MapVersionDirectoryEntry ⇔ LexEVS

CodingScheme

CodingSchemeRendering

CTS2

MapCatalogEntrySummary

MapVersionDirectoryEntry	LexEVS

CodingSchemeabout

CodingSchemeRendering
about	codingSchemeURI
mapVersionName	localName + '-' + representsVersion

codingSchemeURI

(Refer to Note 1 below table)
documentURI	codingSchemeURI
formalName	formalName

fromCodeSystemcodingScheme.getRelations(0).getSourceCodingScheme()mapNamecodingSchemeName

resourceSynopsis

content value of codingSchemeSummary's codingSchemeDescription

toCodeSystemcodingScheme.getRelations(0).getTargetCodingScheme()

Note 1: The

LexEVS codingSchemeURI value is determined through a special LexEVS URI handler that is responsible for constructing URIs from LexEVS resources

CTS2 'mapVersionName' is the only non 1-1 mapping. In CTS2, a version name is meant to be unique (even across versions) - so the LexEVS LocalName is concatenated with the LexEVS Version to get a unique name.

MapRead

MapVersionRead

CTS2 Interface: edu.mayo.cts2.framework.service.profile.

map

mapversion.

MapReadService

MapVersionReadService

Implementation: edu.mayo.cts2.framework.plugin.service.lexevs.service.

map

mapversion.

LexEvsMapReadService

LexEvsMapVersionReadService

Service Method Mappings Table

CTS2 MapReadService MapVersionReadService methods	LexEVS Service Implementation	LexEVS Service methods used
boolean exists(NameOrURI identifier, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)
boolean existsByTag(NameOrURI parentIdentifier, VersionTagReference tagboolean exists(NameOrURI identifier, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)
List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 1 below table	Not Applicable
List<VersionTagReference> getSupportedTags()	Refer to Note 2 below table	Not Applicable
MapVersion read(NameOrURI identifier(NameOrURI identifier, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)
MapVersion readByTag(NameOrURI codeSystem, VersionTagReference tag, ResolvedReadContext readContext)	org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)

Note 1: Not Not supported at this time and returns an empty List.

Note 2: Only the default of current tag is supported at this time.

Transformation Table:

CTS2 MapCatalogEntry

CTS2 MapVersion ⇔ LexEVS CodingScheme

CTS2 MapCatalogEntryMapVersion	LexEVS CodingScheme
about	codingSchemeURI (Refer to Note 1 below table)codingSchemeURI
formalName	formalName	fromCodeSystem	codingScheme.getRelations(0).getSourceCodingScheme()
keywordList	values from the collection set of localName
mapName	codingSchemeName
set of localName
mapVersionName	codingSchemeName + '-' + representsVersion (Refer to Note 1 below table)
properties	properties
resourceSynopsis	codingScheme.entityDescription.content.value
toCodeSystem	codingScheme.getRelations(0).getTargetCodingScheme()
sourceAndNotation.description	string value "LexEVS"
versionOf.content	codingSchemeName
versionOf.uri	codingSchemeURI

Note 1: The CTS2 'mapVersionName' is the only non 1-1 mapping. In CTS2, a version name is meant to be unique (even across versions) - so the LexEVS CodingSchemeName is concatenated with the LexEVS Version to get a unique nameNote 1: The LexEVS codingSchemeURI value is determined through a special LexEVS URI handler that is responsible for constructing URIs from LexEVS resources.

MapEntryQuery

MapEntryRead

ValueSetDefinitionRead

CTS2 Interface: edu.mayo.cts2.framework.service.profile.mapentryvaluesetdefinition.MapEntryReadServiceValueSetDefinitionReadService

Implementation: edu.mayo.cts2.framework.plugin.service.lexevs.service.mapentrymapversion.LexEvsMapEntryReadServiceLexEvsValueSetDefinitionReadService

Service Method Mappings Table

CTS2

MapEntryReadService

MapVersionReadService methods	LexEVS Service Implementation	LexEVS Service methods used
boolean exists(

MapEntryReadId

ValueSetDefinitionReadId identifier, ResolvedReadContext readContext)

org.

LexGrid.LexBIG.Impl.LexBIGServiceImpl

MappingExtension getGenericExtension("MappingExtension")

Mapping MappingExtension.getMapping(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag, String relationsContainerName)

lexgrid.valuesets.LexEVSValueSetDefinitionServices	ValueSetDefinition getValueSetDefinition(String uri, String revision)
boolean existsByTag(NameOrURI parentIdentifier, VersionTagReference tag, ResolvedReadContext readContext)	Not Applicable	Not Applicable

Mapping restrictToCodes(ConceptReferenceList codeList, SearchContext searchContext)


List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 1 below table	Not Applicable

MapEntry read(MapEntryReadId, ResolvedReadContext readContext)org.LexGrid.LexBIG.Impl.LexBIGServiceImpl

MappingExtension getGenericExtension("MappingExtension")
Mapping MappingExtension.getMapping(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag, String relationsContainerName)
Mapping restrictToCodes(ConceptReferenceList codeList, SearchContext searchContext)

List<VersionTagReference> getSupportedTags()	Refer to Note 2 below table	Not Applicable
ValueSetDefinition read(ValueSetDefinitionReadId identifier, ResolvedReadContext readContext)	org.lexgrid.valuesets.LexEVSValueSetDefinitionServices	ValueSetDefinition getValueSetDefinition(String uri, String revision)
ValueSetDefinition readByTag(ValueSetDefinitionReadId valueSet, VersionTagReference tag, ResolvedReadContext readContext)	Not Applicable	Not Applicable

Note 1: Not supported at this time and returns an empty List

MapVersionQuery

CTS2 Interface: edu.mayo.cts2.framework.service.profile.mapversion

MapVersionQueryService

Implementation

Note 2:

edu.mayo.cts2.framework.plugin.service.lexevs.service.mapversion.LexEvsMapVersionQueryService

Service Method Mappings Table

CTS2 MapVersionQueryService methodsLexEVS Service ImplementationLexEVS Service methods usedint count(MapVersionQuery query)org.LexGrid.LexBIG.Impl.LexBIGServiceImpl

CodingSchemeRenderingList getSupportedCodingSchemes()
getGenericExtension("MappingExtension")
MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)

List<DocumentedNamespaceReference> getKnownNamespaceList()Refer to Note 1 below tableNot ApplicableSet<PredicateReference> getKnownProperties()Refer to Note 2 below tableNot ApplicableDirectoryResult<MapVersion> getResourceList(MapVersionQuery query, SortCriteria sortCriteria, Page page)org.LexGrid.LexBIG.Impl.LexBIGServiceImpl

CodingSchemeRenderingList getSupportedCodingSchemes()
getGenericExtension("MappingExtension")
MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)

DirectoryResult<MapVersionDirectoryEntry> getResourceSummaries(MapVersionQuery query, SortCriteria sortCriteria, Page page)org.LexGrid.LexBIG.Impl.LexBIGServiceImpl

CodingSchemeRenderingList getSupportedCodingSchemes()
getGenericExtension("MappingExtension")
MappingExtension.isMappingCodingScheme(String codingScheme, CodingSchemeVersionOrTag codingSchemeVersionOrTag)

Set<? extends MatchAlgorithmReference> getSupportedMatchAlgorithms()Refer to Note 3 below tableNot ApplicableSet<? extends PropertyReference> getSupportedSearchReferences()Refer to Note 4 below tableNot Applicable

Only the default of current tag is supported at this time.

Transformation Table: CTS2 ValueSetDefinition ⇔ LexEVS ValueSetDefinition

CTS2 ValueSetDefinition	LexEVS ValueSetDefinition
about	valueSetDefinitionURI
documentURI	valueSetDefinitionURI
formalName	valueSetDefinitionURI
CompleteCodeSystemReference	CodingSchemeReference
AssociatedEntitiesReference OR SpecificEntityList	EntityReference
PropertyQueryReference	PropertyReference
CompleteValueSetReference	ValueSetDefinitionReference

ResolvedValueSetQueryService

CTS2 Interface: edu.mayo.cts2.framework.service.profile.resolvedvalueset.ResolvedValueSetQueryService

Implementation:

edu.mayo.cts2.framework.plugin.service.lexevs.service.resolvedvalueset.LexEvsResolvedValueSetQueryService

Service Method Mappings Table

org.lexgrid.resolvedvalueset

CTS2 ResolvedValueSetQueryService methods	LexEVS Service Implementation	LexEVS Service methods used
int count(EntityDescriptionQuery query)	org.lexgrid.resolvedvalueset.LexEVSResolvedValueSetService	listAllResolvedValueSets()
List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 1 below table	Not Applicable
Set<PredicateReference> getKnownProperties

Set<? extends PropertyReference> getSupportedSortReferences

()

Refer to Note 2 below table

Not Applicable

DirectoryResult<EntityDirectoryEntry> mapVersionEntities(NameOrURI mapVersion, MapRole mapRole, MapStatus mapStatus, EntityDescriptionQuery

DirectoryResult<ResolvedValueSetDirectoryEntry> getResourceSummaries(

ResolvedValueSetQuery query, SortCriteria

sortCriteria

sort, Page page)

Refer to Note 5 below tableNot ApplicableDirectoryResult<EntityDescription> mapVersionEntityList(NameOrURI mapVersion, MapRole mapRole, MapStatus mapStatus, EntityDescriptionQuery query, SortCriteria sortCriteria, Page page

org.LexGrid.LexBIG.Impl.LexBIGServiceImpl	CodingSchemeRenderingList getSupportedCodingSchemes() CodedNodeSet getNodeSet(String codingScheme, CodingSchemeVersionOrTag versionOrTag, LocalNameList entityTypes)
Set<? extends MatchAlgorithmReference> getSupportedMatchAlgorithms()	Refer to Note

3 below table

Not Applicable

EntityReferenceList mapVersionEntityReferences(NameOrURI mapVersion, MapRole mapRole, MapStatus mapStatus, EntityDescriptionQuery query, SortCriteria sortCriteria, Page page

Set<? extends PropertyReference> getSupportedSearchReferences()

Refer to Note

4 below table

Not Applicable

Note 1: Not supported at this time and returns an empty List.

Note 2: Not supported at this time and returns an empty Set.

Note 3: Returned Set contains 3 MatchAlgorithmReference objects supporting "exactMatch", "contains" and "startsWith".

Note 4: Returned Set contains 3 PropertyReference objects supporting attributes "about", "resourceName" and "resourceSynopsis".

Note 5: Not supported at this time and throws an UnsupportedOperationException.

Transformation Table: CTS2

MapVersionDirectoryEntry

ResolvedValueSetDirectoryEntry ⇔ LexEVS

CodingSchemeRendering

CodingScheme

CTS2

MapVersionDirectoryEntry

ResolvedValueSetDirectoryEntry	LexEVS

CodingSchemeRendering

CodingScheme

aboutcodingSchemeURImapVersionNamelocalName

setResolvedValueSetURI	codingSchemeURI (Refer to Note 1 below table)
setResourceName	codingSchemeName + '-' + representsVersion (Refer to Note

2 below table)

documentURIcodingSchemeURIformalNameformalName

ResolvedValueSetHeader

property= codingScheme.propertyName[

LexEVSValueSetDefinitionServices.RESOLVED_AGAINST_CODING_SCHEME_VERSION)

ResolvedValueSetHeaderURI= property.getValue().getContent();

ResolvedValueSetHeaderVersion=property.getPropertyQualifier().getValue().getContent();

resourceSynopsis

codingScheme.entityDescription.content.value

resourceSynopsiscontent value of codingSchemeSummary's codingSchemeDescription

Note 1: The LexEVS codingSchemeURI value is determined through a special LexEVS URI handler that is responsible for constructing URIs from LexEVS resources.

Note 2: The CTS2 '

mapVersionName

codeSystemVersionName' is the only non 1-1 mapping. In CTS2, a version name is meant to be unique (even across versions) - so the LexEVS

LocalName

CodingSchemeName is concatenated with the LexEVS Version to get a unique name.

MapVersionRead

CTS2 Interface: edu.mayo.cts2.framework.service.profile.mapversion.MapVersionReadService

Implementation:

ResolvedValueSetResolutionService

CTS2 Interface: edu.mayo.cts2.framework.plugin.service.lexevs.service

.mapversion.LexEvsMapVersionReadService

.resolvedvalueset.ResolvedValueSetResolutionService

Implementation: edu.mayo.cts2.framework.service.profile.resolvedvalueset.ResolvedValueSetResolutionService

Service Method Mappings Table

CTS2 MapVersionReadService methodsLexEVS Service ImplementationLexEVS Service methods usedboolean exists(NameOrURI identifier, ResolvedReadContext readContext)org.LexGrid.LexBIG.Impl.LexBIGServiceImplCodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)boolean existsByTag(NameOrURI parentIdentifier, VersionTagReference tag, ResolvedReadContext readContext)org.LexGrid.LexBIG.Impl.LexBIGServiceImplCodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)List<DocumentedNamespaceReference> getKnownNamespaceList()Refer to Note 1 below tableNot ApplicableList<VersionTagReference> getSupportedTags

CTS2 ResolvedValueSetResolutionService methods	LexEVS Service Implementation	LexEVS Service methods used
Set<? extends MatchAlgorithmReference> getSupportedMatchAlgorithms

()	Refer to Note

3 below table

Not Applicable

MapVersion read(NameOrURI identifier, ResolvedReadContext readContext)org.LexGrid.LexBIG.Impl.LexBIGServiceImplCodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)MapVersion readByTag(NameOrURI codeSystem, VersionTagReference tag, ResolvedReadContext readContext)org.LexGrid.LexBIG.Impl.LexBIGServiceImplCodingScheme resolveCodingScheme(String codingScheme, CodingSchemeVersionOrTag versionOrTag)

Note 1: Not supported at this time and returns an empty List.

Note 2: Only the default of current tag is supported at this time.

Transformation Table: CTS2 MapVersion ⇔ LexEVS CodingScheme

CTS2 MapVersion	LexEVS CodingScheme
about	codingSchemeURI
formalName	formalName
keywordList	values from the collection set of localName
mapVersionName	codingSchemeName + '-' + representsVersion (Refer to Note 1 below table)
properties	properties
resourceSynopsis	codingScheme.entityDescription.content.value
sourceAndNotation.description	string value "LexEVS"
versionOf.content	codingSchemeName
versionOf.uri	codingSchemeURI

Set<? extends PropertyReference> getSupportedSearchReferences()	Refer to Note 4 below table	Not Applicable
Set<? extends PropertyReference> getSupportedSortReferences()	Refer to Note 2 below table	Not Applicable
Set<PredicateReference> getKnownProperties()	Refer to Note 2 below table	Not Applicable
List<DocumentedNamespaceReference> getKnownNamespaceList()	Refer to Note 2 below table	Not Applicable
ResolvedValueSetResult<EntitySynopsis> getResolution( ResolvedValueSetReadId identifier, Set<ResolvedFilter> filterComponent, Page page)	Uses CTS2's LexEvsEntityQueryService	Not Applicable
ResolvedValueSet getResolution(ResolvedValueSetReadId identifier)	Refer to Note 1 below table	Not Applicable
ResolvedValueSetResult<EntityDirectoryEntry> getEntities( ResolvedValueSetReadId identifier, ResolvedValueSetResolutionEntityQuery query, SortCriteria sortCriteria, Page page)	Uses CTS2's LexEvsEntityQueryService	Not Applicable
DirectoryResult<EntityDescription> getEntityList( ResolvedValueSetReadId identifier, ResolvedValueSetResolutionEntityQuery query, SortCriteria sortCriteria, Page page)	Uses CTS2's LexEvsEntityQueryService	Not Applicable

Note 1: Not supported at this time and throws an UnsupportedOperationException.

Note 2: Not supported at this time and returns null.

Note 3: Returned Set contains 3 MatchAlgorithmReference objects supporting "exactMatch", "contains" and "startsWith".

Note 4: Returned Set contains 3 PropertyReference objects supporting attributes "about", "resourceName" and "resourceSynopsis".

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Old Version 31

New Version Current

Key

CodeSystemVersionRead

EntityDescriptionQuery

Transformation Table:

EntityDescriptionRead

Service Method Mappings Table

CTS2 EntityDirectoryEntry ⇔ LexEVS ResolvedConceptReference

EntityDescriptionRead

Service Method Mappings Table

Transformation Table: CTS2 EntityDescription ⇔ LexEVS ResolvedConceptReference

MapQuery

Service Method Mappings Table

Transformation Table: CTS2 MapCatalogEntrySummary ⇔ LexEVS CodingScheme

MapRead

Service Method Mappings Table

Transformation Table: CTS2 MapCatalogEntry ⇔ LexEVS CodingScheme

MapEntryQuery

Service Method Mappings Table

Transformation Table: CTS2 MapEntryDirectoryEntry ⇔ LexEVS ResolvedConceptReference

MapEntryRead

Transformation Table: CTS2 EntityDescription ⇔ LexEVS ResolvedConceptReference

MapQuery

Service Method Mappings Table

Transformation Table: CTS2 MapEntry ⇔ LexEVS ResolvedConceptReference

MapVersionQuery

Service Method Mappings Table

Transformation Table:

CTS2 MapVersionDirectoryEntry ⇔ LexEVS

CodingSchemeRendering

MapVersionRead

Service Method Mappings Table

Transformation Table:

CTS2 MapVersion ⇔ LexEVS CodingScheme

MapEntryQuery

MapEntryRead

ValueSetDefinitionRead

Service Method Mappings Table

MapVersionQuery

Service Method Mappings Table

Transformation Table: CTS2 ValueSetDefinition ⇔ LexEVS ValueSetDefinition

ResolvedValueSetQueryService

Service Method Mappings Table

Transformation Table: CTS2

ResolvedValueSetDirectoryEntry ⇔ LexEVS

CodingScheme

ResolvedValueSetResolutionService

Service Method Mappings Table

Service Method Mappings Table

Transformation Table: CTS2 MapVersion ⇔ LexEVS CodingScheme