NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Migrated to Confluence 5.3
Panel

Note: This collection has been migrated to The Cancer Imaging Archive (TCIA) with improved quality control standards and an expanded patient population. For more information about this collection please visit the TCIA wiki's TCGA-GBM Collection page.

Summary

Project Summary

...

The Cancer Imaging Program (CIP) is working with the cooperation of several of the TCGA GBM tissue-contributing institutions to obtain the pre-surgical diagnostic MRIs has archived a large portion of the radiological images of the genetically-analyzed cases whose genetic . Clinical, genetic, and pathological data resides in the TCGA portal]. These images with their TCGA identifier tags relating to the genomic, clinical, and pathological data being stored within the TCGA Data Portal.  Currently this large MR multi-sequence image collection of pre-surgical glioblastoma patients can be matched by each unique case identifier with the extensive gene and expression data of the same case from the Cancer Genome Atlas Data Portal to research the link between clinical phenome and tissue genome.  Over time it is expected to grow in diversity, including other tumor types that are being collected as part of the funded TCGA activities.

These images were also utilized as part of the caBIG TCGA Enterprise Use Case project. This caBIG enterprise use case involves loading the TCGA images stored in NBIA into 3 different workstations that are being developed with annotation and markup capabilities based on Annotation Imaging Markup (AIM)

...

data portal while the radiological data is stored within TCIA. The data utilizes the same TCGA patient identifiers in both repositories, allowing researchers to explore the correlations between tissue genotype and radiological phenotype.

Data Access

Collection Statistics

 

Modalities

MR

Number of Patients

98

Number of Studies

120

Number of Series

1,118

Number of Images

129,053