Skip Navigation
NIH | National Cancer Institute | NCI Wiki   New Account Help Tips
Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

The Table below represents extensions made to each ISA-TAB file in support of ISA-TAB-Nano.

ISA-TAB Extension Field Name

ISA-TAB File

Purpose

Investigation Disease

Investigation

To capture and retrieve investigations associated with specific disease modalities such as cancer

Investigation Disease Term Accession Number

Investigation

To enable semantic interoperability for disease terms

Investigation Disease Term Source REF

Investigation

To enable semantic interoperability for disease terms

Investigation Outcome

Investigation

To enable researchers to review the outcomes of investigations for assessing the utility of the investigation in achieving scientific endpoints

Study Disease

Investigation

To capture and retrieve studies associated with specific disease modalities such as cancer

Study Disease Term Accession Number

Investigation

To enable semantic interoperability for disease terms

Study Disease Term Source REF

Investigation

To enable semantic interoperability for disease terms

Study Outcome

Investigation

To enable researchers to review the outcomes of studies for assessing the utility of the investigation in achieving scientific endpoints

Study Factor Name Term Accession Number

Investigation

To enable semantic interoperability for study factor name

Study Factor Name Term Source REF

Investigation

To enable semantic interoperability for study factor names

Study Assay Measurement Name

Investigation

To capture the variables measured in an assay to support cross study analysis

Study Assay Measurement Name Term Accession Number

Investigation

To enable semantic interoperability for assay measurement names

Study Assay Measurement Name Term Source REF

Investigation

To enable semantic interoperability for assay measurement names

Material Source Name REF

Study

To provide a reference for the material associated with the study and identfied in the Material file

Material File

Study

To provide a reference for the ISA-TAB-Nano material file that describes the material samples of a study

Measurement Value

Assay

To record the endpoint value of an assay measurement within the assay file

Statistic

Assay

To capture the statistical measures (e.g. mean, SD) associated with a measurement or factor value

All Fields

Material

To describe nanomaterials and small molecules

...