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titleEVS Vocabulary Processing

EVS licenses and serves third party terminology as needed to meet NCI and caBIG requirements. These vocabularies come to EVS from a variety of sources and in a variety of formats. Though the LexBIG application is able to import most of these formats directly, a few terminologies require further processing before they can be loaded. Details on terminology sources, formats and processing are provided on this page.

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Locally produced vocabularies

EVS produces the following vocabularies and makes them available through The the LexEVS API and various browsers (NCIt Browser, NCI Metathesaurus Browser, BiomedGT wiki).

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Name

Source

URL for Download

Secured?

Format

Size

Processing Notes

NCI

...

...

...

...

...

...

...

...

...

...

NAOWL

...

1M

...

N/A

External vocabularies published by EVS

EVS makes available a number of terminologies through the BioPortal NCI Browser and API that are produced by sources outside the NCI.


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Name

Source

URL for Download

Secured?

Format

Size

Processing Notes

Gene Ontology

Gene Ontology Consortium

ftp://ftp.geneontology.org/pub/go/ontology-archive/

...

N/A

OBO

12M

...

...

N/A

RIM database

32M

...

None

NDF-RT

Department of

...

...

...

...

...

...

/ftp1/NDF-RT/

Yes

OWL

4M

Converted from

...

Ontylog to OWL by Lockheed Martin

...

...

Radiological Society of North America

...

http://www.rsna.org/radlex/downloads.cfm

...

 

...

OBO

...

7M

...

 

The MGED Ontology

...

...

http://mged.sourceforge.net/ontologies/MGEDOntology.owl

...

 

No longer being produced - has been incorporated into OBI

N/A

OWL

1M

...

...

...

...

N/A

RRF

1M

...

...

 

...

OBO

...

1M

...

UMLS subsets published by EVS

The UMLS is not published in entirety. Instead a number of subset ontologies are extracted and published.

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