Page History

Versions Compared

Key

This line was added.
This line was removed.
Formatting was changed.

...

REST calls are not platform specific. They can be integrated into a wide variety of platforms.

Browser
Java
Scala
Python
JavaScript
Unix Command line
Any platform able to handle REST calls and XML or JSON formatted responses

...

Code Block

language	python
title	Python REST Client
collapse	true

__author__ = 'sbauer'
from restful_lib import Connection

conn = Connection("http://informatics.mayo.edu/cts2/rest")
reply = conn.request_get("/valuesets")
if reply['headers']['status'] == '200':
    print reply['body']


conn = Connection("http://informatics.mayo.edu/cts2/rest")
reply = conn.request_get("/valuesets?format=json",headers={'Accept':'application/json;q=1.0'})
if reply['headers']['status'] == '200':
    print reply['body']
    print eval(reply['body'])

conn = Connection("http://informatics.mayo.edu/cts2/rest")
print conn.request_get("/valuesets?matchvalue='Sequence'")['body']'] == '200':
    print reply['body']
    print eval(reply['body'])

conn = Connection("http://informatics.mayo.edu/cts2/rest")
print conn.request_get("/valuesets?matchvalue='Sequence'")['body']

JavaScript (JQuery and Bootstrap.js)

Code Block

language	javascript
linenumbers	true

var CodeSystemListConfig = {
    serviceUrl: "http://<base url>/codesystemversions?format=json"
};

function init() {

    $(document).ready(
        function() {
            var url = CodeSystemListConfig.serviceUrl;
            $.getJSON(url + "&callback=?", function (data) {

                for (var i in data.codeSystemVersionCatalogEntryDirectory.entryList) {
                    var entry = data.codeSystemVersionCatalogEntryDirectory.entryList[i];
                    var key = entry.formalName;
                    var designation = entry.documentURI;
                    var uri = entry.href;
                    $("ul").append("<li><a href=\"" + uri +"\">" + key + "</a></li>");
                }
            });
        });
}

Code Block

language	html/xml
title	HTML
linenumbers	true

<!DOCTYPE html>
<html>
<head>
    <title>Code System</title>
    <meta name="viewport" content="width=device-width, initial-scale=1.0">
    <!-- Bootstrap -->
    <link href="bootstrap/css/bootstrap.min.css" rel="stylesheet" media="screen">
    <script src="cts2/js/codeSystem.js"></script>
    <script src="cts2/js/jquery-1.10.2.js"></script>
</head>
<body>
<h1>Code Systems</h1>
<script>init()</script>
<ul class="nav nav-pills nav-stacked">
    <li class="active"><a href="#">Home</a></li>
</ul>
<script src="bootstrap/js/bootstrap.js"></script>
</body>
</html>

Unix Command Line

returns XML that can be piped to a file

...

Code Block

collapse	true

<IteratableResolvedValueSet xmlns="http://schema.omg.org/spec/CTS2/1.0/ValueSetDefinition" xmlns:core="http://schema.omg.org/spec/CTS2/1.0/Core"xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://schema.omg.org/spec/CTS2/1.0/ValueSetDefinition http://www.omg.org/spec/cts2/201206/valuesetdefinition/ValueSetDefinition.xsd" complete="PARTIAL" numEntries="50" next="http://<base url>/valueset/NICHD Newborn Screening Terminology/definition/4125c982/resolution/1?page=1&maxtoreturn=50">
<core:heading>
<core:resourceRoot>
valueset/NICHD Newborn Screening Terminology/definition/4125c982/resolution/1
</core:resourceRoot>


<core:resourceURI>
http://<base url>/valueset/NICHD Newborn Screening Terminology/definition/4125c982/resolution/1
</core:resourceURI>


<core:accessDate>2013-09-13T16:54:52.357-05:00</core:accessDate>

</core:heading>


<resolutionInfo>
<resolutionOf>
<core:valueSetDefinition uri="http://ncit:C89506" href="http://<base url>/valueset/NICHD Newborn Screening Terminology/definition/4125c982">4125c982</core:valueSetDefinition>
<core:valueSet>NICHD Newborn Screening Terminology</core:valueSet>

</resolutionOf>



</resolutionInfo>


<entry uri="http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16847" href="http://<base url>/codesystem/NCI_Thesaurus/version/10.07e/entity/NCI_Thesaurus:C16847">
<core:namespace>NCI_Thesaurus</core:namespace>
<core:name>C16847</core:name>
<core:designation>Technique</core:designation>

</entry>


<entry uri="http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C34816" href="http://<base url>/codesystem/NCI_Thesaurus/version/10.07e/entity/NCI_Thesaurus:C34816">
<core:namespace>NCI_Thesaurus</core:namespace>
<core:name>C34816</core:name>
<core:designation>Congenital Metabolic Disorder</core:designation>

</entry>


<entry uri="http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C81178" href="http://<base url>/codesystem/NCI_Thesaurus/version/10.07e/entity/NCI_Thesaurus:C81178">
<core:namespace>NCI_Thesaurus</core:namespace>
<core:name>C81178</core:name>
<core:designation>Newborn Screening</core:designation>

</entry>


<entry uri="http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C50644" href="http://<base url>/codesystem/NCI_Thesaurus/version/10.07e/entity/NCI_Thesaurus:C50644">
<core:namespace>NCI_Thesaurus</core:namespace>
<core:name>C50644</core:name>
<core:designation>Lung Overinflation</core:designation>

</entry>


<entry uri="http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13235" href="http://<base url>/codesystem/NCI_Thesaurus/version/10.07e/entity/NCI_Thesaurus:C13235">
<core:namespace>NCI_Thesaurus</core:namespace>
<core:name>C13235</core:name>
<core:designation>Fetus</core:designation>

</entry>

Content

Space Tools

Versions Compared

Old Version 48

New Version 49

Key

JavaScript (JQuery and Bootstrap.js)

Unix Command Line