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Active Period

Active from September 9, 2009 to November 30, 2009

Issue/Problem Statement

Problem Statement: caBIG, NCI, cancer centers and other organization associated with caBIG need to be able to easily create and edit ("author") Terminologies.  Although NCI has used various authoring tools in the past, they have proven too heavyweight for use in an easy, distributed environment.  With the advent of distributed terminology publishing services (eg, LexEVS), the caBIG community will need to consider tools and services for AUTHORING terminologies.

Objectives

This group should produce (at least) two documents:

1)  A list of prioritized requirements for a terminology authoring tool/service.  The requirements can be (but do not have to be) layered. That is, high level conceptual requirements (eg, based on best practices) and lower level, implementation specific requirements for an NCI/caBIG implementation.

2)  A table (a simplistic notion = a table like in consumer reports) of terminology authoring tools/services on the market that are ranked according to the criteria in #1 above.  There should be some written text on the 5 highest priorities with an emphasis on how that tool or service can be brought into use by caBIG/NCI and in what time frame.

Deliverables

This section should provide the list of deliverables with their respective due dates.

Deliverable 

Description

Due Date 

Draft List - Tools

Draft list of terminology authoring tools and environments

Oct 10

Draft List - Requirements

Stable draft of requirements/features that will be used to compare tools

Oct 19

Update at F2F in Atlanta

Tentative, if enough to show, and an appropriate slot exists

Oct 20

Draft Table - Tools vs Features

Draft table of tools/ environments vs features/requirements

Oct 30

Annotated Table - Tools vs Features

Annotated table of tools/ environments vs features/requirements

Nov 15

Final Documents

Final requirements/features and annotated table

Nov 30

Background and Purpose

caBIG has in place a critical component of semantic interoperability, a Terminology Service (LexEVS as an implementation at NCI) for serving or publishing terminologies.  Another component necessary is a terminology authoring tool for creating and editing terminologies.  caBIG will soon be ready for a distributed terminology services, one need is to provide a choices for terminology authoring service for those institutions (including NCI) which desire to author (as well as serve) terminologies in the context of caBIG (eg, served thru the caGrid).  This document serves as a charter for a small group to do market research on possible terminology authoring tools that satisfy terminology authoring best practices and caBIG/NCI needs.

Group Organization, Roles, and Responsibilities

This section should provide an overview on the members of the small group and their roles and responsibilites.

...

Member Name

...

Role

...

Responsibilities

...

Sherri de Coronado

...

Coordinator

...

Lead, facilitate, set up meetings, meet deadlines

...

Larry Wright

...

Co-Coordinator

...

ditto

...

Cecil Lynch (Ontoreason)

...

VCDE contractor

...

Core Research and document production

...

Solbrig/ Pathak (Mayo)

...

VCDE contractor

...

Core Research and document production

...

Russ Hamm (Apelon)

...

VCDE contractor

...

Core Research and document production

...

Keith Campbell (Informatics Inc)

...

VCDE contractor

...

Core Research and document production

...

Stan Huff (Intermountain Healthcare)

...

volunteer

...

Provide domain expertise and end user viewpoint

...

James Cimino (NIH/Laboratory for Informatics Development)

...

volunteer

...

Provide domain expertise and end user viewpoint

...

Brian Davis

...

advisor

...

 

Document Information

Author: Craig Stancl
Email: Stancl.craig@mayo.edu
Team: LexEVS
Contract: CBITT BOA Subcontract# 29XS223
Client: NCI CBIIT
National Institutes of Heath
US Department of Health and Human Services

Revision History

Version

Date

Description of Changes 

Author

1.0

5/14/10

Initial Version Approved via Design Review

Team

Objectives

The objective of this release of the LexEVS API is to design and construct a reference implementation of the CTS2 specification, leveraging LexEVS as the basis for the design and code base.

This release will address support for value sets, mappings between code sets, support for creation of local extensions to code sets and support related to content creation and editing.

Scope of Work

This effort will focus on three major capabilities needed by LexEVS to fully support CTS2. Defining a specification and reference implementation of a new version of LexEVS that:

  • Provides support for value sets
  • Develops within LexEVS the ability to provide local extensions to code sets and maps among code sets
  • Develops within LexEVS other capabilities called for in the CTS2 Specification.

Please view the project scope document at: LexEVS 6.0 Scope Document

Summary of Products and Services

Functional Description

Please view the functional description (as part of the design document) at: LexEVS 6.0 Design Document - Solution Architecture#Required CTS2 Functionality.

Technical Architecture

Please view the technical architecture (as part of the design document) at: LexEVS 6.0 Design Document - Solution Architecture#HighLevelArchitecture

Analytical Services

Please view the analytical services (as part of ECCF documentation) at: LexEVS 6.0 Platform Independent Model

Data Services

Please view the data services (as part of ECCF documentation) at: LexEVS 6.0 Platform Independent Model

Preliminary Deployment Plan

Please view the deployment plan document at: LexEVS 6.0 Implementation Plan Document

Stakeholder Summary

CBIIT Staff/Contractor Name

Role

Responsibilities

George Komatsoulis

NCICB Application Infrastructure

Oversees NCICB Application Infrastructure

Avinash Shanbhag

NCICB Application Infrastructure

Oversees NCICB caCORE Software Engineering

Larry Wright/ Sherri de Coronado

EVS Product Managers

Directs EVS Projects

Denise Warzel

CORE Product Line Manager

Trans-CORE requirement coordination

Gilberto Fragoso

Associate Director EVS Infrastructure

Technical Direction

Jason Lucas

EVS Software Project Manager

Project schedule and task management for EVS team

Craig Stancl

Mayo Clinic Technical Lead

Technical Direction and Implementation

Traci St.Martin

Mayo Clinic Project Manager

Project schedule and task management

Larry Brem

SAIC caBIG ARCH and VCDE Technical Program Manager

Contract governance

Document History

Item

Information

Document Version:

Click the Info tab. View the Recent Changes or click the link to view the page history.

Last Modified:

Refer to the first line displayed in the document window.

Project GForge site:

LexEVS GForge Docs archive, Files archive

Most current version:

Unless the display includes a notice that you are viewing a previous version, you are viewing the most current version of this Scope Document for the release indicated in the title.

Revision history:

Click the Info tab. In the Recent Changes area, click the link to view the page history.

Review history:

Click the Info tab. In the Recent Changes area, note the developer who made each change and the date and time. Refer to the Key People Directory for their roles. Click the link to view any page or to view the page history, and then click the link for a page. When the page opens, view the comments and changes made in that version.

Related documents:

Confluence Wiki documents: LexEVS 6.0 Development Documents
GForge documents archive (deliverables) (LexEVS Project Documents 6.0)

Project Information

CBIIT Management

Role

Responsibilities

Larry Wright/ Sherri de Coronado

Co-Product Managers

Oversees development of the product: features, functions, definition of stakeholders, priorities within the scope, timeframe for release

Avinash Shanbhag

Engineering Manager

Oversees NCICB caCORE software engineering practices, conducts design reviews, guides technical development

Denise Warzel

Product Line Manager

Oversees NCICB caCORE product line. Responsible for overall product integration, major and minor release cycles. Supports Product Manager.

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Work to date:

Wikipedia site with list of authoring tools / 2007 survey of ontology tools

Draft of Requirements (Larry Wright, Sherri De Coronado and Gilberto Fragoso)

Gforge site

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