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Definition of project
The goal of this project is to create a survey of Publicly Available InVivo Medical Imaging Archives and the underlying software capabilities. It is generally agreed that there is a need for public medical imaging archives to provide the biomedical research community, industry, and academia with access to images that support:
- Lesion detection and classification
- Accelerated diagnostic imaging decision
- Quantitative imaging assessment of drug response
The purpose of this project is to provide a practical guide for the community which allows them to assess existing software and instantiations that are appropriate to their research or clinical needs.
Publicly Hosted Biomedical Imaging Archives
| NCI's NBIA node | Central XNAT | NIST | LONI/ADNI | NIAMS NBIA | NDAR | Give A Scan | NA-MIC | Pediatric MRI Data Repository | EORTC | MIDAS |
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Sponsor(s) | Cancer Imaging Program, caBIG |
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Content Type | In Vivo Cancer Imaging |
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| Alzheimer's Medical Imaging | Osteoarthritis | Autism Research | Patient-contributed Medical scans |
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Archive Software | NBIA |
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Supported Operating Systems | Linux, Mac?, Windows? |
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Active development Team/Community | Yes |
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Central curation/review | Yes |
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Explicit data sharing policy (link) |
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Availability/Uptime | 99%? |
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Submission Technology | CTP |
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Standard of De-Identification | Supplement 142 w/ Keep Description, Retain Device Info options enabled |
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Support for multi-site submissions | Yes |
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Project- or collection- based groupings? |
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Size of Current Volume | ~3TB |
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| None |
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Federated implementation | Yes |
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Public API | Yes |
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number of DICOM Tags query-able | ~90? |
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DICOM transfer protocol | For submission, but not download |
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methods to download DICOM data | Web, FTP, Java Webstart client |
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Affiliation with Journal |
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Central XNAT
http://central.xnat.org/app/template/Login.vm
LONI
http://www.loni.ucla.edu/ADNI/
https://ida.loni.ucla.edu/login.jsp?project=ADNI
https://ida.loni.ucla.edu/services/Menu/IdaData.jsp?project=ADNI
NAMIC
NAMIC Image Gallery: http://www.na-mic.org/publications/gallery
Lung Cancer Alliance: Give A Scan
NDAR
http://ndar.nih.gov/ndarpublicweb/aboutNDAR.go
Pediatric MRI Data Repository
https://nihpd.crbs.ucsd.edu/nihpd/info/data_access.html
NIH Image Bank
http://media.nih.gov/imagebank/index.aspx
EORTC
http://www.eortc.be/services/forms/erp/default.aspx
EORTC TUMOR BANK (pathology)
MIDAS
http://midas.osa.org/midaspub/\\
Image archive software solutions
| NBIA | XNAT | NIST | OpenPacs | DCM4CHEE |
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Interface/GUI | Web | Web |
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Query flexibility |
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Role Based Security | Yes |
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Public access option | Yes |
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Active Development |
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Supports Federated Implementation | Yes |
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API available |
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Supported image formats |
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Supported metadata formats |
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Helpdesk support |
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Transfer protocols (import/export) |
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Controlled Vocabulary |
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Deployment Support |
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NBIA
https://gforge.nci.nih.gov/frs/?group_id=312
Xnat
http://www.xnat.org/
http://www.xnat.org/2010+XNAT+Workshop+Agenda
OpenPacs
http://www.mii.ucla.edu/index.php/MainSite:OpenSourcePacsDocumentationImageServer