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1 | Obtain or write an OWL2 source An example is the OBI Ontology described here: http://obi-ontology.org/page/Main_Page With source currently available here: http://svn.code.sf.net/p/obi/code/releases/2015-09-15/obi.owl | ||||||||||||||||||||||||||
2 | Create a manifest and preferences file for this source Manifests are XML files formatted to an XML schema. They are easiest to create when using an XML editor that can reference an XML schema. The manifest schema is hosted here: http://LexGrid.org/schema/2010/01/LexOnt/CodingSchemeManifest For OWL2 the user can create one like the example for regular OWL above but add a tag for mappings that will help define namespaces in the OBI load:
As tag content supply a supported coding scheme for the enclosing coding scheme OBI.
After this tag define the namespace for the enclosing coding scheme with a reference to the enclosing coding scheme in the equivalent coding scheme attribute
All other namespaces can be defined in the same way with references from the original OWL source which are found in the xmlns attributes of the "<rdf:RDF tag." Each with a reference to the enclosing coding scheme using the equivalentCodingScheme attribute
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3 | Load source with options using option files |
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