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LexEVS 6.4.1

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Release Highlights Include:

  • Update LexEVS to use Lucene 5.2.1
  • OWL2 and loader enhancements 
  • Admin script updates
  • HTTPS enhancements
    • New
      Add Page
      nameRemote Client HTTPS Requirements
      linkTextHTTPS Requirements

       

LexEVS 6.4

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.1 - Features Implemented

FeatureSummary
LEXEVS-784

OWL2 Loader - annotation on association, object + annotation (v1)

LEXEVS-868

Upgrade LexEVS to Lucene 5.X

LEXEVS-1271

Add to documentation of Entity Centered query documentation

LEXEVS-1335

Loader - OWL2: Load of OWL2 sources will deal with only and exactly restrictions

LEXEVS-1336

Loader - OWL2: Load of OWL2 sources will deal with has role relationships from "some" restrictions

LEXEVS-1338

Loader - OWL2: Load of OWL2 sources will deal with tagged obo namespace values as resolvable properties

LEXEVS-1450

Admin Script: LoadValueSetDefinition script should output confirmation message

LEXEVS-1731

Allow exclusion of anonymous classes optionally in dynamic resolution of a value set definition.

LEXEVS-1884

Update URI resolver URL to point to NCI's URI resolver

LEXEVS-1151

Loader - OWL2: Investigate OBI Load - why loading of named instances (individuals) don't appear in the browser.

LEXEVS-1152Loader - OWL2: Investigate OBI Load - why restrictions on a class are not being seen in the GUI
LEXEVS-1153Loader - OWL2: Investigate NDFRT Load - why restrictions on a class are not being seen in the GUI 
LEXEVS-1160Loader - OWL2: NDFRT Loader - Restrictions on a class not displayed in the browser.
LEXEVS-1299Loader - OWL2: Unable to associate property code with property label.
LEXEVS-1339Loader - OWL2: Entity or BFO_0000001 has qualifier value that is not resolved
LEXEVS-1976Loader - OWL2: Investigate to determine if complex property loader directives are hard coded
LEXEVS-2030

Loader - OWL2 history annotation should be represented as an IRI

LEXEVS-1338Loader - OWL2: Load of OWL2 sources will deal with tagged obo namespace values as resolvable properties

LexEVS 6.4.1

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- Defects Fixed

Defect
Summary
LEXEVS-826

RRF loader - staging table column width needs to be increased for AUI1 and AUI2

LEXEVS-828

Investigation of serialization error on mapping api

LEXEVS-829

Mapping extension iterator delivers incorrect or infinite number of next() values

LEXEVS-850

Mapping Extension API Coded Node Iterator implemenation is defective

LEXEVS-851

Tree extension returns nodes from another scheme in multi-namespace search

LEXEVS-852

The buildJsonPathFromRootTree method returns JSON string with no namespace.

LEXEVS-853

Missing restrictions after OWL2 load

LEXEVS-854

Codes get prefixed with a namespace

LEXEVS-855

NDFRT OWL2 loads restrictions as anonymous classes

LEXEVS-942

MRMAP loader doesn't load all available mappings

LEXEVS-946

OBI hierarchy is broken

LEXEVS-957

Mapping iterators do not work on distributed

LEXEVS-970

Identify issues associated to "OWL2 loader not backwards compatible with OWL1 sources"

LEXEVS-980

Unable to retrieve source and target versions of a mapping coding scheme through Relations API.

LEXEVS-999

MedDRASecurity OutOfMemoryError issue.

LEXEVS-1017

Unable to access extension.xsd from Mayo's server.

LEXEVS-1033

OBI SupportedNamespaces data issue.

LEXEVS-1034

NPO SupportedNamespaces data issue.

LEXEVS-1037

Loader - HL7: HL7 SupportedNamespaces data issue.

LEXEVS-1055

LexEVS OWL2 loader fails when there is no network connectivity

LEXEVS-1143

Load through GUIs is one-at-a-time

LEXEVS-1158

OBI Loader - Named instances (individuals) not displayed in the browser.

LEXEVS-1159

OBI Loader - Restrictions on a class not displayed in the browser.

LEXEVS-1165

GUI - Filter out resolved value set definitions from the coding scheme dropdown.

LEXEVS-1169

Admin Script: LoadMedDRA script instructions/example is wrong

LEXEVS-1172

LexEVS GUI - Value Set Loader dialog should allow multiple loads

LEXEVS-1192

OBI property qualifiers not being loaded

LEXEVS-1204

Fix mapping scheme resolution issues for new lucene

LEXEVS-1255

Implement property type query for lucene

LEXEVS-1264

Load NCIt to OWL2 for to evaluate potential issues

LEXEVS-1266

Investigate options for reimplementing scoring over multiple indexes

LEXEVS-1296

lbGUI cleanup script fails when no metadata is present

LEXEVS-1305

lbGUI refresh button does not fully refresh indexes

LEXEVS-1306

lbGUI coding scheme activation fails

LEXEVS-1309

Dev branch on CI server will pass tests to a certain degree

LEXEVS-1333

CodedNodeSetImpl constructor should throw a resource unavailable exception

LEXEVS-1337

Loader - OWL2: Anotation uses individuals

LEXEVS-1340

Query against missing index creates obscure error message

LEXEVS-1386

Under some circumstances, Tree extension fails while running on the browser against OBI

LEXEVS-1418

Admin Script CleanUpMetadata is broken

LEXEVS-1419

Admin Script ExportOBO is broken

LEXEVS-1420

Admin Script LoadRadLexProtegeFrames is no longer used

LEXEVS-1421

Admin Script LoadUmlsBatch is broken

LEXEVS-1422

Admin Script LoadMedDRA is broken

LEXEVS-1423

Admin Script RemoveResolvedValueSet is broken

LEXEVS-1424

Admin Script LoadResolvedValueSetDefinition is broken

LEXEVS-1425

Admin Script LoadUMLSHistory.bat is broken

LEXEVS-1426

Admin Script RemoveIndex.bat is broken

LEXEVS-1427

Correct Namespace Functionality in path to root implementation

LEXEVS-1430

Loader - Batch Loader: Rxn Batch Loader Extension Fails to load

LEXEVS-1431

Update cleanup test for improved CI service test running

LEXEVS-1520

Inactive Coding Schemes can be queried

LEXEVS-1521

Some property qualifier based searches do not return values

LEXEVS-1522

Lazy Loadable Code to Return Fails on a single value

LEXEVS-1523

Under some conditions, queries to newly tagged terminologies cause a failure.

LEXEVS-1524

Mapping Node resolve to iterator fails

LEXEVS-1525

Under some circumstances, resolved value set does not return expected results

LEXEVS-1526

XML export does not work except for associations

LEXEVS-1552

Cleanup Utility fails

LEXEVS-1572

Post load manifest fails on association update

LEXEVS-1575

Transient Unit test failure in Mapping Extension AP

LEXEVS-1615

Clean Up script only registers and does not create new Indexes

LEXEVS-1625

RRF Loader loads apparent duplicates of SMQ property values

LEXEVS-1628

I want LexEVS 6.4 to perform subsecond searches on multiple coding scheme and larger single index searches

LEXEVS-1729

Unexpected behavior found in searching value set using LexEVSValueSetDefinitionServices API.

LEXEVS-1757

Utility method in SearchExtension

LEXEVS-1871

GUI UMLSBatchLoader fails

LEXEVS-1948

Loader - OWL: Complex properties hardcoded in OWL Loader

LEXEVS-2016

Loader - HL7: entityCode format needs to be updated

LEXEVS-2078Lexevs install script completes with an error - gui/Linux-lbGUI.sh does not exist anymore

LexEVS Remote API 6.4

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.1 - Features Implemented

FeatureSummary
LEXEVSREM-2 Provide HTTPs for LexEVS Remote API

LexEVS Remote API 6.4

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.1 - Defects Fixed

DefectSummary
  

LexEVS Remote Client 6.4.1 - Features Implemented

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LexEVS Remote Client 6.4.1 - Defects Fixed

DefectSummary
  

LexEVS CTS2 Service 1.5.1

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- Features Implemented

FeatureSummary
LEXEVSCTS2-35

CTS2 does not provide property qualifier support

LEXEVSCTS2-36

Parameterize the URI resolver service URL for CTS2 LexEVS-Service

LEXEVSCTS2-37

Update URI resolver URL to point to NCI's production URI resolver

LexEVS CTS2 Service 1.5

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.1 - Defects Fixed

DefectSummary
LEXEVSCTS2-45 

LexEVSResolvedValueSetService Test fails with Java 1.8

LEXEVSCTS2-53CTS2 Service fails to resolve entities for HL7 terminology loaded from MIF

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