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caDSR Wiki | caDSR Database and Tools | caDSR Documentation
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Additionally, attempting to download all the caDSR CDEs would result in a file that is too large for a single MS Excel download.
Therefore, "canned", or pre-downloaded collections in the following CDEs are provided for your convenience.
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NCI Standard CDEs
- For current list of all NCI Standards since the date of this download, visit the NCI caDSR CDE Browser and click "Advanced Search", select "Standard" Registration Status, select "Search".
- All production CDEs with Registration Status = "STANDARD" as of August 10th, 2015
caDSR Community Released CDEs
- For current list of all NCI Standards since the date of this download, visit the NCI caDSR CDE Browser and select "Search", or enter search criteria to filter the results.
- All non-retired production CDEs (CDEs with Workflow status NOT = "RETIRED....") as of July 29th, 2015
REDx - caDSR REDCap Transformation Utilities
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- User Guide
REDxCDE V3
- Transformation utility to convert caDSR CDE Browser 4.0.5 XML download format into REDCap Data Dictionary as of 2014/11/10
- Version 3 - 2015-08-05: Change field note to contain the CDE Question Text, the field does not need to be lower-case without spaces, that rule applies only to variable name
- Version 2.1 - 2015-6-18: Add instruction for customizing Form name, Id and Version
- Version 2.0 - 2015-6-10: Add a check for existing CDE PV Values. If already a numeric, use existing value. If not, generate a unique value based on the position in the value list.
REDxCRF Single V5.0
- Transformation utility to convert a single caDSR Form Builder 4.0.3.1 formCart Version 1 XML format (retrieved from Objcart API) into REDCap Data Dictionary
- Version 5 - 2015-07-29: Add a check for existing CDE PV Values. If PV Value is already a numeric, use existing value. If not, generate unique value based on the position of the PV in the value list.
- Version 4 - 2014-11-10:
- Change generation of Field Label to the original caDSR Preferred Question Text, without converting it to lower case and replacing spaces with underscores
- See Version comments within the xslt for prior version release notes
Current NCI Standard CRFs
The NCI develops and publishes standard CRF templates for use in creating new clinical trials protocol forms. Each CRFs consists of CDEs organized into 3 sections: mandatory, optional, and conditional CDEs. To retrieve these and any other forms registered in caDSR since the dates listed below, please visit the caDSR Form Builder, where a Guest account and passcode are provided for your convenience.
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Adverse Event and Series Adverse Event NCI CRF Standards created on September 5th, 2014
- Adverse Event and Serious Adverse Event CTCAE v3 NCI CRF Standards 2748814 in Excel
- Adverse Event and Serious Adverse Event CTCAE v4 NCI CRF Standards 3265657 in Excel
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Concomitant Medication NCI CRF Standards created on September 5th, 2014
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Consent NCI CRF Standards created on October 4th, 2013
- Consent NCI CRF Standards 3475603 in Excel
- Consent Withdrawal NCI CRF Standards 3913324 in Excel
- Consent Withdrawal QOL NCI CRF Standards 3913360 in Excel
- Consent Withdrawal Specimen NCI CRF Standards 3913343 in Excel
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CT Image Acquisition NCI CRF Standards created on December 9th, 2013
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CT Imaging Agent NCI CRF Standards created on December 9th, 2013
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Demography NCI CRF Standards created on March 22nd, 2013
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Diagnosis NCI CRF Standards created on December 9th, 2013
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Diagnosis Administrative NCI CRF Standards created on October 4th, 2013
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Diagnosis Gross Pathology NCI CRF Standards created on December 9th, 2013
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Diagnosis Intervention NCI CRF Standards created on January 7, 2014
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Attempting to download all the caDSR CDEs would result in a file size that is too large for a single MS Excel download, and currently forms can only be downloaded one form at a time.
Therefore, "canned", or pre-downloaded collections of all the NCI "Released" CDEs, and CDEs by selected individual projects in is provided for your convenience. The NCI Preferred Standards have become too large to download in a single file, so they can be extracted from the "Released" CDE files.
Note that NCI added an FTP site where all "Released" CDEs as XML.
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REDCap CDE and CRF Transformation Utilities - REDx
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Current NCI Standard CRFs
The NCI develops and publishes standard CRF templates for use in creating new clinical trials protocol forms. Each CRFs consists of CDEs organized into 3 sections: mandatory, optional, and conditional CDEs. To retrieve these and any other forms registered in caDSR since the dates listed below, please visit the caDSR Form Builder, where a Guest account and password are provided for your convenience.
There are currently over 70 Standard CRFs released for production use.
There are 60 CRFs that have been converted to REDCap format and can be found in the Shared Library, and in the zip file attached here.
NCI Standard CRFs: REDCap format Zip
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- Staging Corpus Uteri Carcinoma NCI CRF Standards 3444622 in Excel
- Staging Gestational Trophoblastic NCI CRF Standards 3447654 in Excel
- Staging Liver NCI CRF Standards 3443558 in Excel
- Staging Pancreas NCI CRF Standards 3453359 in Excel
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Project CDEs
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TCGA Phase II Data Elements
- TCGA Phase II CDEs in Excel - as of Oct. 19, 2011
- TCGA Phase II CDEs in XML - as of Oct. 19, 2011
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North American Central Cancer Registries (NAACCR) meta data elements (CDEs)
- NAACCR 11.1 CDEs in Excel - as of Dec 17, 2010
- NAACCR 11.1 CDEs in XML - as of Dec 17, 2010
- NAACCR 12.1 CDEs in Excel - as of April 23, 2012
- NAACCR 12.1 CDEs in XML - as of April 23, 2012
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Surveillance, Epidemiology and End Results (SEER) meta data elements (CDEs)
- SEER CDEs in Excel - as of Dec 23, 2010
- SEER CDEs in XML - as of Dec 23, 2010
BRIDG metadata elements (CDEs)
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CDEs Initiatives
CDEs initiatives are owned by individual NCI Divisions, Offices, and Centers, as well as by NCI stakeholder communities who have chosen to use NCI caDSR as a central repository for their CDEs. The CDEs are organized in the caDSR CDE Browser based on Context and Classification Scheme. Contexts represent a community who have agreed to share CDEs and CRFs, within a Context end users create Classification Schemes within caDSR for various projects in their community, and use them to classify and organize CDEs. The classifications are a list of keywords and categories familiar to the community. Opening up a Context in the CDE Browser will reveal a "Classifications" node, that when opened will list all the projects in alphabetical order. Clicking on a project node will return a list of all the CDEs for that project.
For prior downloaded versions of these collections, see the Attachments listed at the end of this page. The date of the download is listed as the "as-of" date for each collection of CDEs.
If importing caDSR content from a download into another ISO/IEC 11179 or other similar CDE or CRF metadata registry, please add the caDSR Registration Authority Identifier (RAI) 2.16.840.1.113883.3.26.2 to the metadata to keep the caDSR content distinct from the local repository. Per ISO/IEC 11179, the RAI is part of a globally unique identifier known as the IRID (Item Registry Identifier), and uniquely identifies registry content as being related to particular registrars. The IRID for all caDSR content is the <caDSR OID + Item public Id + item version>. For example, if the caDSR item public id = 2181292, version = 1.1, when importing you would add the RAI, and the result would be an IRID = 2.16.840.1.113883.3.26.2 + 2181292 + 1.1.
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Health Information National Trends Survey (HINTS2005)
- HINTS 2005 CDEs in Excel - as of April 04, 2012
- HINTS 2005 CDEs in XML - as of April 04, 2012
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eMerge Project
- eMerge CDEs in Excel - as of August 05, 2015
- eMerge CDEs in XML - as of August 05, 2015
For other prior versions of the files see the Attachments listed at the end of this page.
If importing caDSR content into another ISO/IEC 11179 registry, i.e. local implementation of cgMDR, please add the caDSR Registration Authority Identifier (RAI) 2.16.840.1.113883.3.26.2 to the metadata to keep the caDSR content distinct from the local repository. Per ISO/IEC 11179, the RAI is part of a globally unique identifier known as the IRID (Item Registry Identifier), and uniquely identifies registry content as being related to particular registrars. The IRID for all caDSR content is the <caDSR OID + Item public Id + item version>. For example, if the caDSR item public id = 2181292, version = 1.1, when importing you would add the RAI, and the result would be an IRID = 2.16.840.1.113883.3.26.2 + 2181292 + 1.1.
The following lists the attachments to this page.
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