Page History

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1. Log in to the CSSI DCC Portal.
2. Select Investigations > Upload.
   The Upload ISA TAB Files page appears.
   

3. Click New Project.
   The Project Properties page appears.

   Info
   A project is simply a container for the ISA-TAB file. It allows you to track multiple versions of the same ISA-TAB file. It is a best practice for each investigation to have its own project.

   
   
   

4. Enter a title for your new project. Note that this title and the compressed ISA-TAB file that the project contains can be different.

5. Click Save Project.
   The page expands to allow you to specify the file to upload.
   Image Modified
   

   Info
   Click Edit to change the project name.

6. Select the file you want to upload in either of the following ways:

   • Drag and drop the ISA-TAB archive file from your computer to the Drop your files here box surrounded by the dashed lines:
     

   • Click the Drop your files here box image and browse to where the file is stored.
     Template files must be in one of the following archive formats: .zip,.rar,.tar,.gz. The file can be no larger than 500 MB.

7. Click Upload files.
   The status of the file becomes Ready.
   
8. Click Upload files.
   The file begins processing and the status moves through the following stages:
   • Uploading
   • Processing Queued
   • <need other statuses>
     
   • Success: file processed successfully
     

9. Refresh the page to see the new upload listed in the Investigation Projects section. You must take additional steps to publish it.
   
   

   Info
   title Versioning ISA TAB Files
   The first time you upload an ISA Tab TAB file to a new project, it is the first version of that file. While it is a best practice to associate only one investigation with a project, you can make changes to your investigation data, create a new ISA TAB file that reflects those changes, and then upload the new file to the original project. Each time you upload a new ISA TAB file to a project, the version number increases by one.

   
   

10. Click Open.
    The project information opens below on the page.

11. Click Preview.
    

    
    

    
    

12. 
    

Troubleshooting the Upload Process

Missing Data Files: File processed successfully. 1 files referenced in the assay(s) were not found. Click here to view the missing file lists (limited to 1000 entries each).