NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Section
Column
width40%
Panel
titleContents of this Page
Table of Contents
minLevel2
Column
Panel
titleAt-a-Glance Details
  • Version Number and Release Date: 6.5 Community Version, August 2018, release notes
  • Primary audience: Investigators and Researchers
  • Installation Level: Intermediate - technical assistance may be required; download may require supporting infrastructure or software
  • System Requirements: Provides web-based access to de-identified DICOM images, markups, and annotations using role-based security. The NBIA download package is a ZIP package that includes the NBIA application, supporting libraries, RSNA Clinical Trial Processor (CTP) submission client/server (with NBIA modifications), and associated documentation.

Include Page
wikicontent:Included Page of CBIIT and NCIP Links
wikicontent:Included Page of CBIIT and NCIP Links

Tool Overview

Multiexcerpt
MultiExcerptNameNBIA

The National Biomedical Imaging Archive (NBIA) is a free and open source service and software application that enables users to securely store, search, and download diagnostic medical images, providing a searchable national repository integrating in vivo cancer images with clinical and genomic data. Using role-based security, NBIA provides web-based access to de-identified DICOM images, image markup, annotations, and rich metadata. The NBIA download package is a ZIP package that includes the NBIA application, supporting libraries, the RSNA MIRC application (with NBIA modifications), documentation, and a sample NBIA database.

...

  1. Creation of an imaging informatics infrastructure that provides cost-effective support for purpose-built and other databases as necessary, precluding the need to create separate infrastructure for each database.
  2. Development of searchable imaging reference libraries linked to clinical outcomes data to assist researchers and practitioners.
  3. Availability of the archive for mining and integration by the broader research and clinical community.
  4. Robust support for data-driven decision making in oncology and medical practice in general by clinicians throughout the world.

Installation and Downloads

NBIA Artifacts

NBIA provides a simplified approach to install on Linux and Windows platforms. Much of the installation process has been automated so that if you accept the default values, you can install NBIA by typing the single command ant. With the exception of the database, all supporting tools are automatically installed and configured as part of the installation. The installation package contains the binaries and scripts necessary to install the application and API. Refer to the NBIA Installation Guide for details.

Documentation is available on the NBIA wiki. There is also an NBIA GitHub repository

Multiexcerpt include
MultiExcerptNameExitDisclaimer
nopaneltrue
PageWithExcerptwikicontent:Exit Disclaimer to Include
. Sign up for the NBIA User listserv to receive updates about this tool.

NBIA Installation Files and Release Notes

NBIA 6.5 Community Version Artifacts (Current Release)FileSize
NBIA Distribution Package

nbia-install_6.5.zip

299 MB
CTP Client Package (including FileSender)CTP_Client.zip15.6 MB
NBIA Release NotesNBIA 6.5 Community Version Release NotesN/A

...

Downloader 3.0 (Current Release)

The Downloader is an app that allows you to download the images you have added to your data basket. More information on how to use the Downloader is in the user's guide link.
 

...

.

...

PlatformFileSize
Windows93 MB
Mac98 MB
Linux (tested on CentOS)

TCIADownloader-3.0-1.x86_64.rpm

To run this file, type the following at the command prompt:
sudo yum install TCIADownloader-3.0-1.x86_64.rpm

89 MB
Linux (tested on Ubuntu)

tciadownloader_3.0-2_amd64.deb

To run this file, type the following at the command prompt:
sudo dpkg -i tciadownloader_3.0-2_amd64.deb

83 MB

Support and Documentation

...

Open Source Development

Contact Application Support for information about open source development and NBIA.

Refer to the NBIA Documentation.Online help is available  and online help in the application.

No training materials are available. Refer to Presentations, Demos and Other Materials for an overview and demo.

...