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Tool

Name

Purpose

Annotations


Layer Manager


Home

Return to the caMicroscope home page.

Draw

Draw thin lines, thick lines, or polygons on the image.

Magnifier

Image Added

Measurement

Image Added

Share View

Image Added

Side by Side Viewer

Image Added

Heat Map

Image Added

Labeling

Image Added

Segment

Image Added

Bug Report

Image Added

Reviewed

Zooming In and Out

To zoom in on the image, click the main content window with your mouse. Each time you click, the view zooms in further, the scale updates, and the bounding box in the inset window changes to show how much of the total image is in the main content window. When you are zoomed in very far, the bounding box may not be visible. Zooming out reverses this process.

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To Zoom Out: Press and hold the Shift key while you click on the main window.

Zoomed in:


Zoomed out:

 

Panning an Image

Panning allows you to move the image inside the window.

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Tool

Name

Purpose


Home

Return to the caMicroscope home page


caMicroscope

Return to the caMicroscope application


Filter Markups

View only those markups associated with selected algorithms. For more information, see page 8.


Show/Hide Markups

View the image with or without markups.


Decrease Opacity

Decrease the opacity of the selected markup(s), making it/them more transparent.


Increase Opacity

Increase the opacity of the selected markup(s), making it/them less transparent.


Show Weight Panel

This panel allows you to adjust the automatic lymphocyte prediction results for this slide, with the options described below.

  • Lymphocyte Sensitivity bar:

Adjust the sensitivity of lymphocyte prediction.

Choose a higher volume for more predicted lymphocyte regions.

  • Necrosis Specificity bar:

Adjust the specificity of necrosis prediction.

Choose a higher volume for more predicted lymphocyte regions.

  • Lymphocyte Prediction box:

Show lymphocyte prediction without necrosis filtering.

  • Necrosis Prediction box:

Show necrosis prediction.

  • Lym Prediction with Nec Filtering box:

Show lymphocyte prediction with necrosis filtering (recommended).


Free Line MarkupDraw thin lines, thick lines, or polygons on the image.



Switch User

If you are a super user, click this button to review and change other people’s annotations.

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