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Project

Goal

Assigned to

Accomplished?

1ICDC

Create schematics and a design document to access data files - formalize how this is going to work

Dimitri

Work still in progress.

2ICDCCreate a sustainable style guide for user interfaceDimitri

Done, but still work in progress.

3ICDCCreate All cases view to display the case using GraphQL APIAjay

Done.

4ICDCImplement a 404 error page and re position header logosAjay

Done.

5ICDCCreae Create GraphQL query for: dashboard, program details, cases of study, files of study, aliquotes of study,files of sample, files of cases, and samples of studyYizhenDone, but QA not done.
6ICDCValidate input data against data model, give detailed error messages if any, only load data if passed validation.Ming

Done.

7ICDCData loader should be able to read inputs file from a given S3 bucket.MingDone.
8ICDCRe-configure the existing NCATS data transformation such that it outputs Neo4J-ready loading files, and generate the appropriate .txt loading files.KevinDone.
9ICDCUpdate the data model so as to completely remove the Evaluation node and its relationships:PhilDone.
10ICDCRe-transform and load COTC007B Course Initiation data into Neo4JPhilDone.
1111ICDCRe-configure the existing NCATS data transformation such that it outputs Neo4J-ready loading files, and generate the appropriate .txt loading files.Kevin12ICDCRe-configure the existing transformations for longitudinal medical observations from COTC007B into Neo4J-ready loading files, and generate the appropriate .txt loading files for Physical Exam, Vital Signs and Extent of Disease records.PhilDone.
1213ICDCInvestigate parallel Pentaho-based transformation of grouped source filesKevinDone.
1314ICDCLoad longitudinal medical observations from COTC007B , COTC010, and COTC018 studies into Neo4J.Kevin, Phil, ClaireDone.
1514ICDCDefine Authentication and Authorization Workflow using FenceAmitPartially done.
1516ICDCLoad NCATS data directly into Neo4J databaseKevinDone.
1716ICDCImpose constraints upon NCATS-related fields within ICDC SamplePhilDone.
1718ICDCAutomatically create visit records using Neo4J loaderunassignedMingDone.
1819ICDCmapping all properties to BRIDG entitiesPhilOn going - need to get document from Wendy and put on Box.
1920ICDCTest newly-imposed constraints around NCATS-related fieldsPhilNext sprint - needed validation tool.
2021ICDCES Lint implementationAjayIn progress.
2122ICDCCreate sidebar presentation with CheckboxesAjayDone.


Retrospective Results

What went well

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