NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Multiexcerpt
MultiExcerptNameNBIA

The National Biomedical Imaging Archive (available both in the

Link in New Window
linkTextclassic
tipNBIA Classic Interface
hrefhttps://imaging.nci.nih.gov/ncia/login.jsf
search interface and
Link in New Window
linkTextnew
tipNBIA Data Portal New Interface
hrefhttps://imaging.nci.nih.gov/nbia-search/
search interface) is a free and open-source service and a software application that enables users to securely store, search, and download diagnostic medical images, providing a searchable national repository integrating in vivo cancer images with clinical data. Using role-based security, NBIA provides web-based access to de-identified DICOM images, image markup, annotations, and rich metadata. The NBIA download package is a ZIP package that includes the NBIA application, supporting libraries, the RSNA MIRC application (with NBIA modifications), documentation, and a sample NBIA database.

...

Before installing NBIA, you must download and install Java SE Development Kit 8, Apache Ant, MySQL, and Tomcat, and set environmental variables. You must also specify the parameters in the properties file to customize NBIA. Refer to Chapters 3 and 4 of the NBIA

Link in New Window
linkTextNational Biomedical Imaging Archive Installation Guide
tipNational Biomedical Imaging Archive Installation Guide
hrefNational Biomedical Imaging Archive Installation Guide
 for details.

After installing all pre-requisite software and setting the properties, you can install NBIA by typing the single command ant. The NBIA installation configures Tomcat for running NBIA and the optional NBIA REST API, and creates an NBIA-specific schema within a pre-existing database on a pre-installed MySQL server. Refer to Chapter 5 of the NBIA

Link in New Window
linkTextNational Biomedical Imaging Archive Installation Guide
tipNational Biomedical Imaging Archive Installation Guide
hrefNational Biomedical Imaging Archive Installation Guide
 for NBIA installation details.

Link in New Window
linkTextNBIA User Documentation
tipNBIA User Documentation
hrefNBIA User Documentation
is available on the NBIA wiki. There is also an
Link in New Window
linkTextNBIA GitHub repository
tipNBIA GitHub repository
hrefhttps://github.com/NCIP/national-biomedical-image-archive
.
Multiexcerpt include
MultiExcerptNameExitDisclaimer
nopaneltrue
PageWithExcerptwikicontent:Exit Disclaimer to Include
 Sign up for the NBIA User listserv
Link in New Window
linkTextNBIA user listserv
tipNBIA user listserv
hrefhttps://list.nih.gov/cgi-bin/wa.exe?REPORT&z=3&s=0&9=O&a=1
to receive updates about this tool.

...