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Item	Who	Notes
Welcome & Roll Call	Gina Kuffel
New imputation paper	Elaine Ostrander	Best practices for low pass sequencing Link to paper on Box: https://nih.box.com/s/e86q5cithio6tfsu63rhq1vu0spg3btc Expected allele frequencies are an important factor
Alignment status of 1500 dog10K	Elaine Ostrander	Community using new German Shepherd reference from the Broad
Timing of Variant Release	Elaine Ostrander
Canine Reference Genome from the Broad	Elaine Ostrander	Link to paper on Box: https://nih.box.com/s/esdgq1qukgqmeae55wjauvegfrmp5y6o Paper shared through email with BPSC on July 20th from Toby.
Pan Cancer Study	Shaying Zhao	Breed prediction pipeline The 15TB harmonized reads are generated from cases with matched tumor and normal samples both passing our comprehensive quality control measures, including breed validation and prediction using our software provided

Committee Goals	Gina	Variant filter file Some of the filters are not well understood by the group A discussion is needed to identify overlap and differences in variant calling filter files being using by various groups Dependent on genome best practices for calling germ-line mutations Best Practices publication Initial Outline on Box: https://nih.app.box.com/folder/137612017625 Elaine to potentially take the lead on this initiative A milestone driven outline with dates and assigned tasks is needed Set to begin work on this effort by mid August Target date for submission is October 1, 2021

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