Page History

...

1. Navigate to /local/content/protege/scripts/
2. To startup protege server: "./run-background.sh"
3. Do "tail ../logs/protserv-console.txt" to check that the protege server is running.
4. Server is started when you see "Admin server has started at port 9091"
5. To startup explanation server: “./pellet server --config /local/content/protege/protegedata/configdata/server.properties start"
6. Do "tail ../logs/pellet-console.txt" to check that the explanation server is running.

Packaging Server for Deployment to Upper Tier

1. Navigate to /tmp/protege and remove any files and folders there
2. Copy up server directory -  cp -R /local/content/protege/protegeserver .
3. Copy up explanation server - cp -R /local/content/protege/explanationserver .
4. Package into tarball with version number - tar -cvzf protege-server-deployment-1.00v.tar.gz explanationserver protegeserver
5. Copy tarball to /priv-file-repo/protege/deployment
6. Move any previous versions to /priv-file-repo/protege/archive/deployment-package

Packaging Client for Deployment

1. Navigate to /local/project/protegeClientPackage
2. Remove and previous zip files and client directories but leave java and the run scripts
3. Create directory nci-protege5_V2.1.00v
4. Copy in the desktop client "cp r /local/content/protege/protegedesktop/* ./nci-protege5_V2.1.00v"
5. Copy the jre and run scripts into the new directory

   1. cp -r ./jre1.8.0_102 ./nci-protege5_V2.1.00v/

   2. cp run.* ./nci-protege5_V2.1.00v/

6. Create a zip "zip -r nci-protege5_V2.1.00v.zip nci-protege5_V2.1.00v"

7. Copy the zip to your local machine, unzip and test

8. Put zip on sFTP under evs/Protege/Protege-2.0

Deployment

1. Explanation server is started when you see "Listening at: https://<server>.nci.nih.gov:18080"
2. Unzip the protege package in your chosed directory
3. Run the bat or sh file
4. Do NOT immediate accept download of plugins.  
   1. Go to Launcher/Preferences then the plugins tab.  Make sure you are pointed to the correct plugins location.
   2. Go to File/Check for plugins and select all plugins
   3. Restart protege
5. Set up Lucene - Go to File/Preferences and choose Lucene as in tne General tab
6. Set up Pellet - Go to File/Preferences, the Reasoner tab and the Pellet sub-tab.  
   1. Select Remote as the reasoner type
   2. Enter the server address for pellet
7. Optional - restart Protege
8. Choose File Open from Protege Server.  Enter the credentials and wait.
9. Profit