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SYSTEMS
Systems

Discussion Points:

  • Tickets for EOL Third Party Applications
    • Chuck requested to send contact information for security team to discuss  deadlines.
    • Chuck suggested pulling in D.J. Leslie for discussions
  • CTS2 Docs Investigation
    • Node.js updated on QA and being tested
    • Ticket to Stage should include Node.js instructions.

Nothing new to discuss

Decision Points:


LEXEVS UPDATES

LexEVS Sprint Status


Current Sprint - Sprint 183 (March 24, 2021 – April 3, 2022)

16X237 Agile Development - Sprint Status#16X237AgileDevelopmentSprintStatus-Sprint183
  • Activities
    • HHS Security Link - completed
    • Metathesaurus Investigation
    •     Might need to reload on Data-QA
    • Updates to Spring for LexEVS - up to 6 months workworking through the DAO and registry work
    • Loader Support - Some CanMed conversion edge cases handled
    • More Log4j updates - removing old packages from archives
LexEVS Spring Updates

Discussion Points:

  • Work Status - XML files mapped, several Spring jars updated
    • Still working through configurations
  • Will put together task list for review by Lyubov with prospective dates.

  • Updates noted below.  We are pushing progress to other API's while getting through entire vocab loads. 
  • Also correcting and updating legacy applications as we go

Decision Points:

  • Need to consider mitigation plans for caDSR
    • Meeting to be scheduled with Denise
    • Legacy admin application is up in order to review existing data, but no longer for active editing.
    • Other dependencies to be reviewed
  • Need to look at Drug Dictionary, OCPL and other dependencies on CTS2
Decision Points:

CBIIT's enterprise github

Discussion Points:

  • Shall we drop this from our meeting notes?
    • Need name
    • Need NIH email
    • Need github username
    Waiting for Dates from Github Team

Decision Points:

Mark is out this week and will gather and post this information when he returns

BOD 22-01 HHS Vulnerability Disclosure Link

Discussion Points:

Report Exporter on Prod

  • CTS2 Docs - on QAMay require node.js update on Stage and ProdInformational app so not critical
  • Craig Haines says ASAP, but not needed by Friday

Decision Points:

Share any info with Lyubov

Meta Tree investigation

Discussion Points:

  • Ticket Created NCI-INC0656932.  
  • We have a response and will be running a new load.Nothing new to report

Decision Points:

CTS2 Mapping/URI Resolver

Discussion Points:

  • On Hold

Decision Points:

Statistics Dashboard

Discussion Points: Need to review responses to our requirements

Decision Points:

Comparison/Mapping Tool

Discussion Points

  • Had a meeting
  • Have access to Server
  • If there is time, we'll meet with Tracy Truong to establish work flow.  On hold

Decision Points:

EVS transition to virtual machines

Discussion Points:

Decision Points:

Team Absences

Mayo Team

  • Scott - April 29th 
  • Tracy - 


Vulnerability testing

Jason can see results.  Mark has no new updates.

Lyubov would like an update at end-of-day every day until complete



EVS SERVICE AND ARCHITECTURE GROUP UPDATES

EVS Service and Architecture Group

Discussion Points:

Decision Points:


DATA UPDATES
Data

Discussion Points: 

New NCIt - should be on Prod by Friday

Decision Points:


BROWSER UPDATES

Browser

Discussion Points:

  • Penetration vulnerability tag on Stage and Prod.
  • Issue with browse button on browser fixed
  • On Prod for now
  • Expecting another round of penetration testing and scans

Decision Points: 

  • New vulnerability reported by user - 'cross site request forgery'Will require generating tokens for each page and have server compare local stored token to submitted page.JIRA issue entered on a mapping issue to LexEVS

QA UPDATES

QA

Discussion Points:

  • Did testing on vulnerability remediation for NCI Term From and EVS Explorefinished termbrowser and termform vaildation
  • Finished smoke test of Report Exporter
  • Working on EVS Rest API, EVS Explore
  • Adding NCIt Browser to queue
  • CTS2Docs test in progress - has two ticket responses. Should finish testing by end of day

Decision Points: 

  • on CTS2Docs
  • Reviewed data for CanMED and HGNC
  • Reviewing EVSRestAPI

Decision Points: Lyubov suggested some way of tracking what is status of QA - a tracking of apps when they arrive, are mid-testing, are ready for promotion, and so on. Will work with Mark.



TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 

Discussion Points: Updates to columns 

Decision Points: 


LexEVS Spring Migration Progress


Spring Related Update

Estimated Effort

Status

Spring Related Update

Estimated Effort

Status

Ivy Dependency Update3 daysComplete
Ibatis to Mybatis xml conversion3 daysComplete
Compile capable code conversion3 daysComplete
Application context startup1 week Complete
CodingSchemeDao Verification tests / Code Corrections10 daysIn progress
Association Dao Verification tests  / Code Corrections10 daysIn progress
Registry Dao Verification  / Code Corrections10 daysIn progress
Coded Node Graph Dao / Code Corrections10 daysNot Started
Entity Dao / Code Corrections10 daysNot Started
NCI History Dao / Code Corrections3 daysNot Started
Property Dao / Code Corrections10 daysIn Progress
Revision Dao / Code Corrections2 daysIn Progress
System Release Dao / Code Corrections1 dayNot Started
Pick List Dao / Code Corrections1 week Not Started
Pick List Entry Dao / Code Corrections1 week Not Started
Source Asserted Value Set Dao / Code Corrections2 daysNot Started
Value Set Definitions Dao / Code Corrections10 daysNot Started
Value set Hierarchy Dao / Code Corrections1 day Not Started
Vaue set Definition Entry Dao / Code Corrections2 daysNot Started
Value Set Entry State Dao / Code Corrections2 daysNot Started
Value Set Property Dao / Code Corrections1 week Not Started
Versions Dao / Code Corrections2 days In Progress
Testing/ Verification1 week Not Started
Load tests 2 weeksNot Started
Testing verification Recoding10 daysNot Started
Full system test1 dayNot Started
LexEVS Remote3-4 weeksNot Started
LexEVS CTS2 Service2-3 weeksNot Started



Total Effort (Approximately)4-5 months

Vocabularies Slated for Production

 Terminology Updates and Schedule


Vocabulary Name

Local Name

Version

Arrival Date

Loaded to data-qa DB

Date to Stage

Date to Production

Vocabulary Name in LexBIG

Short Name

Version identifier

Date the vocabulary arrived for processing

Has the vocabulary been loaded to the data-qa database?

Approximate date the vocabulary version is scheduled to move to staging

Approximate date the vocabulary version is scheduled to move to production

NCI ThesaurusNCIt22.04d

 04/25/2022

yes04/28/2204/29/22
NCIt-HGNCNCIt-HGNCApr2204/25/2022yes04/28/2204/29/22
SwissProtSwissProtApr202204/25/2022yes04/28/2204/29/22
ChEBI
CanMED
ChEBI
CanMED
v210
May22
04
05/
25
02/22yes05/
03
09/2205/
04
10/22
ChEBIChEBI




GOGO




HGNCHGNC
Apr22
May22
04
05/
25
02/22yes05/
03
09/2205/
04
10/22
MED-RTMED-RTMay2022


05/
04
03/22


JIRA Issues


Recent EVS Stats Dashboard Related Bugs and Features (within last week)

Jira
serverNCI Tracker
columnIdsissuekey,summary,issuetype,created,reporter,priority,status
columnskey,summary,type,created,reporter,priority,status
maximumIssues20
jqlQueryproject = "EVS Statistics Dashboard" AND (TYPE = bug or TYPE = "new feature" or TYPE ="Improvement" or TYPE ="Inquiry" or Type="Task") AND created >=2022-04-20 27 AND created <= 2022-0405-27 11
serverId7954a81f-12da-3366-a0ef-97c806660e7c

...

Jira
serverNCI Tracker
columnIdsissuekey,summary,issuetype,created,reporter,priority,status
columnskey,summary,type,created,reporter,priority,status
maximumIssues20
jqlQueryproject = "EVS Report Exporter" AND (TYPE = bug or TYPE = "new feature" or TYPE ="Improvement" or TYPE ="Inquiry") AND created >= 2022-04-20 27 AND created <= 2022-0405-27 11
serverId7954a81f-12da-3366-a0ef-97c806660e7c

...

Jira
serverNCI Tracker
columnIdsissuekey,summary,issuetype,created,reporter,priority,status
columnskey,summary,type,created,reporter,priority,status
maximumIssues20
jqlQueryproject = LEXEVS AND (TYPE = bug or TYPE = "new feature" or TYPE ="Improvement" or TYPE ="Inquiry") AND created >=2022-04-20 27 AND created <= 2022-0405-27 11
serverId7954a81f-12da-3366-a0ef-97c806660e7c

...

Jira
serverNCI Tracker
columnIdsissuekey,summary,issuetype,created,updated,duedate,assignee,reporter,priority,status,resolution
columnskey,summary,type,created,updated,due,assignee,reporter,priority,status,resolution
maximumIssues20
jqlQueryproject = LEXEVSCTS2 AND (TYPE = bug or TYPE = "new feature" or TYPE ="Improvement" or TYPE ="Inquiry" or TYPE ="Task" ) AND created >=2022-04-20 27 AND created <= 2022-0405-27 11
serverId7954a81f-12da-3366-a0ef-97c806660e7c

...