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Section
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titleContents of this Page
Table of Contents
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NBIA 7.1 GA Community Version Release Announcement
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titleAt-a-Glance Details
Link in New Window
linkTextNBIA 7.1 GA Community Version Release Announcement
tipNBIA 7.1 GA Community Version Release Announcement
href
  • Current Release of NBIA Data Retriever: 3.5, January 2020 4.4, October 2022; Linux versions, 4.4.1, August 2023
  • Primary audience: Investigators and ResearchersInstallation Level: Intermediate - technical assistance may be required; download may require supporting infrastructure or software.
  • System Requirements: Provides web-based access to de-identified DICOM images, markups, and annotations using role-based security. The NBIA download package is a ZIP package that includes the NBIA application, supporting libraries, RSNA Clinical Trial Processor (CTP) submission client/server (with NBIA modifications), and associated documentation.
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    •  

    Tool Overview

    Multiexcerpt
    MultiExcerptNameNBIA

    The National Biomedical Imaging Archive (available both in the

    Link in New Window
    linkTextclassic
    tipNBIA Classic Interface
    hrefhttps://imaging.nci.nih.gov/ncia/login.jsf
    search interface and
    Link in New Window
    linkTextnew
    tipNBIA Data Portal New Interface
    hrefhttps://imaging.nci.nih.gov/nbia-search/
    search interface) is is a free and open-source service and a software application that enables users to securely store, search, and download diagnostic medical images, providing a searchable national repository integrating in vivo cancer images with clinical data. Using role-based security, NBIA provides web-based access to de-identified identify DICOM images, image markup, annotations, and rich metadata. The NBIA download package is a ZIP package that includes the NBIA application, supporting libraries, the RSNA MIRC application (with NBIA modifications), documentation, and a sample NBIA database.

    Along with the Clinical Trial Processor software from the Radiological Society of North America, NBIA supports customized de-identification of images. NBIA is able to integrate with other applications through a set of APIs. For more information, see the  Link in New WindowlinkTextthe NBIA REST API User GuidetipNBIA REST API User GuidehrefNBIA REST API User Guide, 

    Link in New Window
    linkTextNBIA DICOM API User Guide
    tipNBIA DICOM API User Guide
    hrefNBIA DICOM API User Guide
    , and 
    Link in New Window
    linkTextNBIA WADO API User Guide
    tipNBIA WADO API User Guide
    hrefNBIA WADO API User Guide
    . 

    NCI's hosted instance of NBIA provides researchers and clinicians with a demonstration of a robust DICOM archive that can securely share and access images to enhance scientific research and support clinical decision making. Anyone can deploy a local instance of NBIA, which you can customize to your organization's branding.

    Installation and Downloads

    Before installing NBIA, you must download and install Java SE Development Kit 8, Apache Ant, MySQL, and Tomcat, and set environmental variables. You must also specify the parameters in the properties file to customize NBIA. Refer to Chapters 3 and 4 of the

    Link in New Window
    linkTextNational Biomedical Imaging Archive Installation Guide
    tipNational Biomedical Imaging Archive Installation Guide
    hrefNational Biomedical Imaging Archive Installation Guide
     for details.

    After installing all pre-requisite software and setting the properties, you can install NBIA by typing the single command ant. The NBIA installation configures Tomcat for running NBIA and the optional NBIA REST API, and creates an NBIA-specific schema within a pre-existing database on a pre-installed MySQL server. Refer to Chapter 5 of the 

    Link in New Window
    linkTextNational Biomedical Imaging Archive Installation Guide
    tipNational Biomedical Imaging Archive Installation Guide
    hrefNational Biomedical Imaging Archive Installation Guide
     for NBIA installation details.

    Guides

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    .

    Installation and Downloads

    Refer to

    Link in New Window
    linkTextNBIA User Documentation
    tipNBIA User Documentation
    hrefNBIA User Documentation
    is available on the NBIA wiki. There is also an
    Link in New Window
    linkTextNBIA GitHub repository
    tipNBIA GitHub repository
    hrefhttps://github.com/NCIP/national-biomedical-image-archive
    . GitHub
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     Sign up for the
    Link in New Window
    linkTextNBIA listserv
    tipNBIA user listserv
    hrefhttps://list.nih.gov/cgi-bin/wa.exe?REPORT&z=3&s=0&9=O&a=1
    to receive updates about this tool.

    NBIA Installation Files and Release Notes

    ...

    NBIA 7.1 Community Version Release Notes

    ...

     for more information on building and installing NBIA.

    No community support is available from the NCI for NBIA.

    NBIA Data Retriever 4.4

    ...

    (Current Release)

    The NBIA Data Retriever is an application that allows you to download the images you have Link in New WindowlinkTextadding added data to the carttipAdding Data to the Carthrefhttps://wiki.nci.nih.gov/display/NBIA/National+Biomedical+Imaging+Archive+User+Guide#NationalBiomedicalImagingArchiveUserGuide-AddingDatatotheCart. More information on how to use the NBIA Data Retriever is at 

    Link in New Window
    linkTextDownloading NBIA Images
    tipDownloading NBIA Images
    hrefhttps://wiki.nci.nih.gov/display/NBIA/NBIA+Data+Portal+User+Guide#NBIADataPortalUserGuide-DownloadingNBIAImages
    .

    ...

    in the TCIA Radiology Portal User's Guide. The NCI supports the current release of the NBIA Data Retriever and two previous releases. Earlier releases have been deprecated.

    Multiexcerpt
    MultiExcerptNameNBIADataRetrieverInstallFiles
    PlatformFile
    Windows

    NBIA Data Retriever-

    ...

    4.

    ...

    4.msi

    ...

    Mac

    NBIA Data Retriever in the Mac App Store

    Linux (tested on CentOS)

    NBIADataRetriever-

    ...

    4.4.

    ...

    1.x86_64.rpm

    To run this file, type the following at the command prompt:
    sudo yum -v -y remove NBIADataRetriever-

    ...

    4.

    ...

    4.x86_64.rpm;sudo

    ...

    yum -y install NBIADataRetriever-

    ...

    4.4.

    ...

    1.x86_64.rpm

    ...

    Linux (tested on Ubuntu)

    nbia-data-retriever-

    ...

    4.4.

    ...

    1.deb

    To run this file, type the following at the command prompt:

    sudo -S dpkg -r nbia-data-retriever-

    ...

    4.

    ...

    4.deb;sudo -S dpkg -i nbia-data-retriever-

    ...

    4.4.

    ...

    1.deb

    ...

    Support and Documentation

    • NCI CBIIT Application Support Email
    • Link in New Window
      linkTextNBIA Documentation
      tipNBIA Documentation
      hrefNBIA Documentation
    • Link in New Window
      linkTextNBIA Listserv
      tipNBIA Listserv
      hrefhttps://list.nih.gov/archives/nbia_user-l.html
       (requires login)

    Defects and Feature Requests

    Open-Source Development

    Contact

    Link in New Window
    linkTextApplication Support
    tipApplication Support
    hrefhttps://datascience.cancer.gov/about/application-support
    for information about open-source development and NBIA.

    Refer to the latest ,

    Link in New Window
    linkTextinstallation guide
    tipNBIA Installation Guide
    hrefhttps://wiki.nci.nih.gov/display/NBIA/National+Biomedical+Imaging+Archive+Installation+Guide
    Link in New Window
    linkTextuser guide
    tipNBIA Data Portal User's Guide
    hrefhttps://wiki.nci.nih.gov/display/NBIA/National+Biomedical+Imaging+Archive+User+Guide
    , and
    Link in New Window
    linkTextdeveloper documentation
    tipNBIA Developer Documentation
    hrefhttps://wiki.nci.nih.gov/display/NBIA/NBIA+Developer+Documentation
    . 

    Presentations, Demos and Other Materials

    Documentation

    Open-Source Development

    NBIA is an open-source project with its code repository on GitHub

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    .

    Presentations, Demos and Other Materials

    • DICOM viewer links
    • TCIA Data Portal four-video YouTube playlist
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    • Link in New Window
      linkTextDICOM Viewer Links
      tipDICOM Viewer Links
      hrefDICOM Viewer Links
    • TCIA Data Portal four-video YouTube 
      Link in New Window
      linkTextYouTube playlist
      tipTCIA Data Portal YouTube Playlist
      hrefhttps://www.youtube.com/playlist?list=PL2uforSa-XbP9Xle6x5skOci8CtmQrT_6