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Ticket Description Actions, Update
NCI-INC0805939
NCI-INC0805936
CTS2 down on Dev and QA
Met with Systems team to debug on Tu, Feb 27.
Waiting to hear back from Zihua on additional debugging work. 

NCI-RITM0512149

Security consult about IP traffic to Prod
Asked for dynamic IP throttling
NCI-INC0810790Report Exporter issue not avail on VPN
Open, escalated

NCI-RITM0513127

Give Zihua He access to apache logs
Having issues with collectors and access to logs star Complete

SCTASK0852270

Old Java version (1.7) on processing server
Completed, needs testing

 

Tomcat 9 installation on DEV
Open

NCI-RITM0510137

FTP access for processing
Chuck Solie actively working, being reviewed
SYSTEMS
.  Cancelled and will be using Sharepoint
EVS transition to virtual machines

STATUS:

  • Prod2 server up and running - being tested
    • Reported issues with value set exports - comparable to old Prod
    • Kim to check how mappings are retrieved
  • DECIDED: conversion first, then transition to VMs.  Likely end of March
  • URLs documented List of EVS URLs



LEXEVS UPDATES

Monthly Planning and Focus

Completed Sprint - Sprint 217 (Feb 2 - Mar 4) -

Current Sprint  - Sprint 218 (Mar 5 - Mar 29) - Sprint 218

For the month of March 2024

  • Report Exporter

    • Start work on templating

  • Improvements, Refactoring Code Debt, Feature development:
  • Implementation of Java 17
  • DataDog
  • NCI Terms Browser
Technical Debt remediation

LexEVS Code Debt Refactoring - Java 17 refactoring currently is in progress

  • Tomcat 9 partially installed on Dev.  Waiting on Java 8 cts2 problems to be resolved before asking for completion  
    • Can move forward now
  •  Tracy to check with team
OS Updates
  • QA conversions starting - Dev, QA, Stage updated for LexEVS. Some issues with CTS2 being debugged
    • First group of servers upating this week
    • Next group next week
    • LexEVS not scheduled yet - CTS2 issue
     
    • Waiting on Prod new server
  • Protege and SIP in completed in Dev/QA/Stage
    • Kathy Coleman to notify when ready to go to Prod - plans being developed
Report Exporter
  • Working on templating starting
    • Doing phase 1 - updating description fields. Completed and testing
  • Wait time indicator on Stage
    • Release notes written
    • Staging down, ticket entered
      • Works off VPN but not on VPN
      • Access to logs provided


Security
  • Notification 3/13 that lvg2015 on Processing server needs update as it relies on Java 7
    • lvg on server updated
    • Applications updated on server
      • Coordinate with Chao and Eric


Statistics Dashboard

OBJECTIVE 
Complete Migration of Statistics Dashboard from SumoLogic to DataDog by March 2024.  Hard end in April (ish) - possibly end of June

STATUS

  • S3 bucket has been created
    • Should be working now
    • Needs testing of archiving and refresh
  • RUM installation completed
  • Collectors installed on all servers except evs.nci.nih.gov 
  • No apache Apache logs being pulled in for on-prem servers - Cyrus reaching out to DataDog supportp805
    • Need tickets for the other servers
    • Found configuration solution - evsrestapi now returning logs on on-prem prod
    • Need all other logs configured

Link: Sharepoint Project Task Checklist

Comparison/Mapping Tool

On Hold

  • Systems asking if we still want to maintain the dev server for EVSCompare
  • Would need to update to Oracle 7 - ticket entered
  • Would need Tomcat and Java updated
AWS Cloud to be in Separate Account

Waiting on AWS team

Team Absences


Mayo Team - Andrew Mar 29, Apr 1

MSC - 

Leidos - 

QA - 

Gov - Mark PTO Apr 23 → May 7th, back on 8th



EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group

 Detailed discussions of CTS2 and caching


DATA UPDATES
Data
  • Metathesaurus standalones processing

BROWSER UPDATES

Browser
  • Both apps down on QA tier last week
    • Meta back up
    • NCITerms needed redeploy
  • History fix ready for promotion - Scott to tag
  • ChEBI loader issue
    • OBO loader was missing qualifier
      • Qualifiers added in 2019, loader written in 2017
      • Lyubov to discuss updates to loader
    • OWL Loader test had hierarchy issues

QA UPDATES

QA
  • complete March 2024 on evsrestapi on Stage and Prod
  • Report Exporter on Stage - one round progression and sanity
    • One pending issue with VPN
  • Prod 2 - Meta, TermForm, CTS2 complete
    • Term browser tickets for value sets and mappings
      • Export XML - Fails on large value set, works on repetition. Same behavior all tiers
      • Mappings being examined

TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 

Mark Benson TPM Update

AWS Tagging - request by Systems to add key:value tags for things used for AWS accounts `evstools-prod` , `evstools-non-prod`

  • Report Exporter is first app to be tested under tags

Contacted about moving LexEVS to Cloud - refused.


Vocabularies Slated for Production

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