NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Migration of unmigrated content due to installation of a new plugin
Scrollbar
iconsfalse

...

Page info
title
title

Version 1.0.2

...

This appendix includes lists and hypertext links, where appropriate, to technical manuals, articles, scientific publications and online resources related to the LexBIG project.

...

Redistributable components (e.g. those listed below) and associated license terms are also made available. The redistributable components provide equivalent content and function, but require more extensive configuration for program execution. |

lexbig

This archive includes the LexBIG runtime code, excluding all dependencies.

lbGUI

The LexBIG graphical user interface runtime code, excluding all dependencies.

activation

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provided by Sun's reference implementation of the JavaBeans Activation Framework (JAF)

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include
standard extension. Used for e-mail notification when runtime errors occur.

caGrid

Grid infrastructure to support the caBIG® community. Contains tools for creating and deploying caBIG®-compliant grid services.

commons-cli

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provides a simple API for working with command line arguments, options, option groups, mandatory options and so forth.

commons-codec

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provides implementations of common encoders and decoders such as Base64, Hex, Phonetic and URLs.

commons-collections

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provides a suite of classes that extend or augment the Java Collections Framework.

commons-lang

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provides a very common set of utility classes that provide extra functionality for classes in the java.lang package.

commons-logging

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provides a bridge between different logging libraries.

commons-pool

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provides a generic object pooling interface, a toolkit for creating modular object pools and several general purpose pool implementations.

gnu-regexp

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provides a Java language implementation of standard NFA regular expression features.

hsqldb

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

SQL relational database engine written in Java.

icu4j

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

International components for Unicode processing.

jakarta-regexp

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Java package for processing regular expressions.

jcalendar

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Java date chooser bean for graphically picking a date.

jdom

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Java-based solution for accessing, manipulating, and outputting XML data from Java code.

jena

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Java framework for building Semantic Web

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include
applications.

junit

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Java regression test framework.

log4j

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Runtime logging services.

lucene-core

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Text search engine library written in Java.
Provides support for regular expression-based queries.
Provides stemming support for indexed concepts.

mail

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Provided by the Sun JavaMail API

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include
. Used for e-mail notification when runtime errors occur.

mm.mysql (drivers, 2.0.6)

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

JDBC drivers for MySQL database.

org.eclipse.

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include
*

Used internally by LexBIG load and export extensions to access and manipulate Eclipse Modeling Framework (EMF)

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include
model representations.

postgresql (drivers)

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

JDBC drivers for PostgreSQL database.

prefuse

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

Used for graph representations in the LexBIG GUI.

swt

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include
( swt .jar)

Provides the underlying widget toolkit used by the LexBIG GUI.

xerces

Multiexcerpt include
nopaneltrue
MultiExcerptNameExitDisclaimer
PageWithExcerptwikicontent:Exit Disclaimer to Include

XML parsing services.

...

Refer to the license.pdf and license.txt files (installed to the LexBIG root directory) for the license terms and conditions of included components.

...

Scrollbar
iconsfalse