NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Migration of unmigrated content due to installation of a new plugin

...

A coding scheme manifest file is a valid XML file, conforming to the schema defined by: http://LexGrid.org/schema/LexBIG/2007/01/CodingSchemeManifestList.xsdImage Removed

This XML file can define values for one or more coding schemes you are dealing with. Some coding scheme meta-information may not easily map to information in the source file. In this case a manifest file is of great help to bridge the gap and control the information flow while mapping to the LexGrid model. A detailed model of the LexGrid Coding Scheme and its fields can be found online. Structure of the schema for the manifest file is explained in the following table (manifest components refer to the original LexGrid model schema namespaces and types):

  • Coding Scheme Manifest entry field: id
    • Type: lgCommon:registeredName
    • Required: Yes
    • Override flag set: Not applicable
    • Description:
      The registered name is the key used to find a coding scheme (for example a unique URL or namespace by which other people access same coding scheme). This String value will be used to identify the manifest entry in the manifest file for the coding scheme too. For example the registered name for coding scheme "Amino-acid" is http://www.co-ode.org/ontologies/amino-acid/2006/05/18/amino-acid.owl#Image Removed. This string is also set as the coding scheme's registered name field in the LexGrid model.

...

An example code snipped:

Include Page
LexEVS:SupplyOwlFileUri SnippetLexEVS:
SupplyOwlFileUri Snippet

For all other manifest loads the following methods are employed.

...

Depending on backup strategy, system administrators will need to be aware that multiple databases are being created and may need backup procedures to meet servicability and recovery requirements for your organization.

MySQL Configuration

MySQL properties

PostGreSQL Configuration

PostgreSQL properties

Scrollbar
iconsfalse