Page History

ExportLgXML

Exports content from the repository to a file in the LexGrid canonical XML format.
Usage:
<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="ce649031bd9f92cd-93e0f612-4b2f45cb-a6b09d25-e12ff1d20708297ff941b324"><ac:plain-text-body><![CDATA[ExportLgXML [-xc] [-an null] [-xall] -v null -u name -out uri [-xa] [-f] ]]></ac:plain-text-body></ac:structured-macro>

• -a,-associationsName Export associations with this name. Only valid with export type 'xa'
• -f,-force If specified, allows the destination file to be overwritten if present.
• -out,-output <uri> URI or path of the directory to contain the resulting XML file. The file name will be automatically derived from the coding scheme name.
• -u,-urn <name> URN or local name of the coding scheme to export.
• -v,-version The assigned tag/label or absolute version identifier of the coding scheme.
• -xa,-exportAssociations Type of export: export only associations.
• -xall,-exportAll Type of export: export all content. Default behavior.
• -xc,-exportConcepts Type of export: export only concepts.
  
  Example:

  Code Block
  ExportLgXML -out "file:///path/to/dir" -u "NCI Thesaurus" -v "05.06e" -f

ExportOBO

Exports content from the repository to a file in the Open Biomedical Ontologies (OBO) format.
Options:

• -out,-output <uri> URI or path of the directory to contain the resulting OBO file. The file name will be automatically derived from the coding scheme name.
• -u,-urn <name> URN or local name of the coding scheme to export.
• -v,-version <id> The assigned tag/label or absolute version identifier of the coding scheme.
• -nf,-noFail If specified, indicates that processing should not stop for recoverable errors
• -f,-force If specified, allows the destination file to be overwritten if present.

  Info
  title Note
  If the coding scheme and version values are unspecified, a list of available coding schemes will be presented for user selection.

  
  
  Examples:

  Code Block
  ExportOBO -out "file:///path/to/dir" -nf -f

  Code Block
  ExportOBO -out "file:///path/to/dir" -u "FBbt" -v "PRODUCTION" -nf -f

ExportOwlRdf

Exports content from the repository to a file in OWL format.
Options:

• -out,-output <uri> URI or path of the directory to contain the resulting OWL file. The file name will be automatically derived from the coding scheme name.
• -u,-urn <name> URN or local name of the coding scheme to export.
• -v,-version <id> The assigned tag/label or absolute version identifier of the coding scheme.
• -f,-force If specified, allows the destination file to be overwritten if present.

  Info
  title Note
  If the URN and version values are unspecified, a list of available coding schemes will be presented for user selection.

  
  
  Examples:

  Code Block
  ExportOwlRdf -out "file:///path/to/dir" -f

  Code Block
  ExportOwlRdf -out "file:///path/to/dir" -u "sample" -v "1.0" -f