NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Section

Column
width220px
Panel
titleUseful Links


Panel
titleICR Active Working Groups


Panel
titlePrevious ICR Working Groups
Column

The Integrative Cancer Research Workspace is producing modular and interoperable tools and interfaces that provide for integration between biomedical informatics applications and data. This will ultimately enable translational and integrative research by providing for the integration of clinical and basic research data. The Workspace is developing a software-engineered, well-documented and validated biomedical informatics toolset for use throughout the research community.

Workspace Logistics

General Workspace Meetings

Additional information is also found on the Molecular Analysis Knowledge Center site.

Subscribe to the ICR listserv.

Upcoming Speakers

Info
titleICR WS Teleconference Speakers

Thank you very much for the many suggestions we received for ICR Workspace teleconference speakers.  Based on your feedback, here are the speakers and topics for our upcoming meetings:

  • March 28: Rakesh Nagarajan, Washington University at St. Louis, will give a presentation on operations of the Wash U Genome Center. Zhong Li, Columbia University, will give an update on new features in geWorkbench.
  • April 11: Sorena Nadaf will speak about UCSF’s application of NGS technology including data management, interoperability and secondary use of data.

    * April 11: Philippe Rocca-Serra, Oxford University, will provide a demo of ISA Tools.

    • April 25: TBD
    • May 9: Richard McCombie will talk about the Cold Spring Harbor Laboratory Genome Center
    • May 23: Sorena Nadaf will speak about USSF's application of NGS technology including data management, interoperability and secondary use of data.

    You are welcome to join us on the 2nd and 4th Wednesdays of each month from 2:00 – 4:00 pm ET.

    Teleconference information:  800-593-0616 passcode: 2927756
    Adobe Connect: http://cbiit.acrobat.com/icrws/


    Recent News

    Info
    titlecaBIG® Life Sciences Domain Analysis Model (LS DAM) v2.2.2 is Released


    We are pleased to announce the release of the caBIG® Life Sciences Domain Analysis Model (LS DAM) v2.2.2. The LS DAM provides a shared view of semantics for the Life Sciences domain, which includes hypothesis-driven basic and pre-clinical research as well as discovery science.
    The changes to the LS DAM in this release are described in the Release Summary and include

    Changes to the Experiment Core for clearer alignment with the ISA-TAB standard and to address feedback from HL7 Clinical Genomics Work Group collaborators
    Deletion of several classes determined not to be in scope of the model
    Addition of an LS DAM Users Guide
    Report and models from an LS DAM Ontological Representation Pilot project

    For a complete list of modifications and additions to the LS DAM v 2.2.2, please see the Release Summary and Change List .  For an exemplar on how the Experiment Core of the LS DAM could be instantiated to support a sample scenario, please see the Experiment Implementation Guide.

    The LS DAM v2.2.2 model is available in two formats:

    An Enterprise Architect file may be downloaded LS DAM v 2.2.2 EA file
    A web based view of the model is also available using Internet Explorer LS DAM v2.2.2 HTML

    Info
    titleNew Article: Informatics and Standards for Nanomedicine Technology


    A recent focus article in “Wiley Interdisciplinary Reviews: Nanomedicine and Nanobiotechnology,” explores nanotechnology and its impact on medicine and biomedical research, as well as the need for informatics standards in Nanomedicine.  To read more about how Nanotechnology has the potential to make medicine more personalized, predictive, and preemptive, click here.


    ...