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Description:

Returns the set of all (or all active) concepts in the specified coding scheme.

Input:

org.LexGrid.LexBIG.iso21090.DataModel.cagrid.CodingSchemeIdentification, org.LexGrid.LexBIG.iso21090.DataModel.Core.CodingSchemeVersionOrTag

Output:

org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.CodedNodeSet.stubs.types.CodedNodeSetReference

Exception:

RemoteException

Implementation Details:

Implementation:

  • Step 1: Create a Resource on the server and populate it with the requested org.LexGrid.LexBIG.LexBIGService.CodedNodeSet.
  • Step 2: Return the Client Reference to the user. This Reference has the above org.LexGrid.LexBIG.LexBIGService.CodedNodeSet as a Resource. An org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.service.CodedNodeSetClient object is built from the above Reference.
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Sample Call

Sample Call:

  • Step 1: Connect to the LexEVS caGrid Service using the org.LexGrid.LexBIG.cagrid.adapters.LexBIGServiceAdapter or org.LexGrid.LexBIG.cagrid.adapters.LexBIGServiceGridAdapter.
    Code Block
    LexBIGServiceGrid lbs = new LexBIGServiceGridAdapter(url);
  • Step 2: Build a org.LexGrid.LexBIG.iso21090.DataModel.Core.CodingSchemeVersionOrTag containing the Version information for the desired Coding Scheme.
    Code Block
    CodingSchemeVersionOrTag csvt = new CodingSchemeVersionOrTag(); csvt.setVersion("testVersion");
  • Step 3: Build an org.LexGrid.LexBIG.iso21090.DataModel.cagrid.CodingSchemeIdentification to hold the Coding Scheme name.
    Code Block
    CodingSchemeIdentification codingScheme = new CodingSchemeIdentification(); codingScheme.setCode(code);
  • Step 4: Invoke the LexBIG caGrid service as follows:
    Code Block
    CodedNodeSetGrid cns = lbs.getCodingSchemeConcepts(codingScheme, csvt);

...

Description:

Returns an instance of the filter extension registered with the given name.

Input:

org.LexGrid.LexBIG.iso21090.DataModel.cagrid.ExtensionIdentification

Output:

org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.Filter.stubs.types.FilterReference

Exception:

RemoteException

Implementation Details:

Implementation:

  • Step 1: Create a Resource on the server and populate it with the requested org.LexGrid.LexBIG.Extensions.Query.Filter.
  • Step 2: Return the Client Reference to the user. This Reference has the above org.LexGrid.LexBIG.Extensions.Query.Filter as a Resource. This client is a Service Context that allows the user to call regular org.LexGrid.LexBIG.Extensions.Query.Filter API calls through the grid service. An org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.Filter.client.FilterClient object is built from the above Reference. This FilterClient implements the Interface org.LexGrid.LexBIG.Extensions.Query.Filter. This makes calling Grid Service Calls through org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.Filter.client.FilterClient transparent to the end user.
--

Sample Call

Sample Call:

  • Step 1: Connect to the LexEVS caGrid Service using the org.LexGrid.LexBIG.cagrid.adapters.LexBIGServiceAdapter or org.LexGrid.LexBIG.cagrid.adapters.LexBIGServiceGridAdapter.
    Code Block
    LexBIGServiceGrid lbs = new LexBIGServiceGridAdapter(url);
  • Step 2: Build an org.LexGrid.LexBIG.iso21090.DataModel.cagrid.ExtensionIdentification to hold the Extension name.
    Code Block
    ExtensionIdentification extension = new ExtensionIdentification(); extension.setLexBIGExtensionName(name);
  • Step 3: Invoke the LexEVS caGrid service as follows:
    Code Block
    Filter filter = lbs.getFilter(extension);

...

Description:

Returns an instance of the sort extension registered with the given name.

Input:

org.LexGrid.LexBIG.iso21090.DataModel.cagrid.ExtensionIdentification

Output:

org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.Sort.stubs.types.SortReference

Exception:

RemoteException

Implementation Details:

Implementation:

  • Step 1: Create a Resource on the server and populate it with the requested org.LexGrid.LexBIG.Extensions.Query.Sort
  • Step 2: Return the Client Reference to the user. This Reference has the above org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.Sort.client.SortClient as a Resource. This client is a Service Context that allows the user to call regular org.LexGrid.LexBIG.Extensions.Query.Sort API calls through the grid service. An org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.Sort.client.SortClient object is built from the above Reference. This SortClient implements the Interface org.LexGrid.LexBIG.Extensions.Query.Sort. This makes calling Grid Service Calls through org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.Sort.client.SortClient transparent to the end user.
--

Sample Call

Sample Call:

  • Step 1: Connect to the LexEVS caGrid Service using the org.LexGrid.LexBIG.cagrid.adapters.LexBIGServiceAdapter or org.LexGrid.LexBIG.cagrid.adapters.LexBIGServiceGridAdapter.
    Code Block
    LexBIGServiceGrid lbs = new LexBIGServiceGridAdapter(url);
  • Step 2: Build an org.LexGrid.LexBIG.iso21090.DataModel.cagrid.ExtensionIdentification to hold the Extension name.
    Code Block
    ExtensionIdentification extension = new ExtensionIdentification(); extension.setLexBIGExtensionName(name);
  • Step 3: Invoke the LexEVS caGrid service as follows:
    Code Block
    Filter filter = lbs.getSortAlgorithm(extension);

...

Description:

Return an interface to perform system-wide query over metadata for loaded code systems and providers.

Input:

none

Output:

org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.LexBIGServiceMetadata.
stubs.types.LexBIGServiceMetadataReference

Exception:

RemoteException

Implementation Details:

Implementation:

  • Step 1: Create a Resource on the server and populate it with the requested org.LexGrid.LexBIG.LexBIGService.LexBIGServiceMetadata.
  • Step 2: Return the LexBIGServiceMetadataClient to the user. This LexBIGServiceMetadataClient has the above org.LexGrid.LexBIG.LexBIGService.LexBIGServiceMetadata as a Resource. An org.LexGrid.LexBIG.cagrid.LexBIGCaGridServices.service.LexBIGServiceMetadataClient object is built from the above Reference.
--

Sample Call

Sample Call:'

  • Step 1: Connect to the LexEVS caGrid Service using the org.LexGrid.LexBIG.cagrid.adapters.LexBIGServiceAdapter or org.LexGrid.LexBIG.cagrid.adapters.LexBIGServiceGridAdapter.
    Code Block
    LexBIGServiceGrid lbs = new LexBIGServiceGridAdapter(url);
  • Step 2: Invoke the LexEVS caGrid service as follows:
    Code Block
    LexBIGServiceMetadataGrid metadata = lbs.getServiceMetadata();

...

LexEVS Grid Service 4.2 URL: {

Code Block
 Link provided for historical purposes http://lexevsapi.nci.nih.gov/wsrf/services/cagrid/LexEVSGridService

...

 Code Block
The 
...
 service 
...
 is 
...
 also 
...
 accessible 
...
 via:
...
caGRID 
...
Portal
Required Libraries
The libraries required for programmatic access to the LexEVS Grid Service are listed in the tables below. The 3rd Party Software Libraries required for use of the LexEVS API Grid Service are listed in the following table.
 Product 
 Jars 
 License 
 Home Page 
 Apache WS-Addressing 
 addressing-1.0.jar 
...
adressing 
...
 1.0.LICENSE
...
 From Globus 4.0.2 Java Web Services Core lib directory: http://www.
...
globus.org/toolkit/downloads/4.0.2
...

 Source available at:
 Code Block
Link provided for historical purposes 
...
http://ws.apache.org/addressin
...
...
 Apache Axis 
  • axis-ant.jar
...
  • axis.jar
...
  • commons-pool-1.3.jar
...
  • commons-logging-1.1.jar
...
  • commons-lang-2.2.jar
...
  • commons-collections-3.2.jar
...
  • commons-codec-1.3.jar
...
  • log4j-1.2.8.jar
...
  • jaxrpc.jar
...
  • saaj.jar
...
  • wsdl4j.jar
...
 axis-jars.LICENSE 
http://
...
ws.
...
apache.org/axis
 Apache Xerces 
 xercesImpl.jar 
 xerces.LICENSE 
http://xerces.apache.org/xerces-j
...
 Apache Lucene 
  • lucene-core-2.3.2.jar
...
  • lucene-regex-2.3.2.jar
...
  • lucene-snowball
...
  • -2.3.2.jar
 Lucene LICENSE 
http://lucene.apache.org/
...
 ASM - all purpose Java bytecode manipulation and analysis framework 
 asm.jar 
http://asm.objectweb.org/license.html
...
http://asm.objectweb.org/
...
 Castor 
 castor-1.2.jar 
...
 Code Block
Link provided for historical purposes http://www.castor.org/license.html
...
 Code Block
...
Link provided for historical purposes http://www.castor.org/index.html
...
 Globus Toolkit 
 cog-axis.jar
 cog-jglobus.jar 
 http://www.globus.org/toolkit/legal/4.0/ 
 Bouncy Castle Crypto APIs 
 jce-jdk13-125.jar 
 http://www.bouncycastle.org/licence.html 
 http://www.bouncycastle.org/ 
 Open Permis 
 wsrf_core.jar
 wsrf_core_stubs.jar 
 http://www.openpermis.org/BSDlicenceKent.txt 
 http://www.openpermis.org/ 
 Apache WSS4J 
 wss4j.jar 
 http://ws.apache.org/wss4j/license.html 
 http://ws.apache.org/wss4j/ 
 Spring 
 spring.jar 
 Spring LICENSE 
 http://www.springframework.org 
...