National Cancer Institute Center for Bioinformatics |
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Product Changes
The objective of this release of Protege 1.4.1 is to provide bugs fixes found in previous Protege releases as well as completing feature request for formatting of the complex properties and improving performance for batch edits.
New Feature Highlights
* 2948: Object properties available in role construction dialog are restricted according to the domain of the class that the role is being asserted on
* 6082: Forward and Backward navigation buttons have been enabled in the NCIEditTab.
* 16121: Buttons to make a class Defined or Primitive have been added to the NCIEditTab. If the entire list of Necessary conditions is to be made Necessary and Sufficient, the conditions don't need to be made defining one at a time, pressing the appropriate button makes all these conditions N&S. The same applies to making a class primitive starting from a defined class. Individual conditions can still be made either defining or non-defining as necessary.
* 21375: Internal format of complex properties has been modified. An xml schema is now used to specify the format. This affects batch editing jobs that include complex properties. The format to use for DEFINITION and ALT_DEFINITION in a batch edit is:
<ncicp:ComplexDefinition xmlns:ncicp="http://ncicb.nci.nih.gov/xml/owl/EVS/ComplexProperties.xsd#"><ncicp:def-definition>Text of DEFINITION.</ncicp:def-definition><ncicp:def-source>NCI or some other</ncicp:def-source><ncicp:attr>some attribution</ncicp:attr><ncicp:Definition_Reviewer_Name>Someone's name</ncicp:Definition_Reviewer_Name><ncicp:Definition_Review_Date>a date in YYMMDD format</ncicp:Definition_Review_Date></ncicp:ComplexDefinition>
If no attribution is required the entire set of tags can be eliminated from the above. And the format for a FULL_SYN is:
<ncicp:ComplexTerm xmlns:ncicp="http://ncicb.nci.nih.gov/xml/owl/EVS/ComplexProperties.xsd#"><ncicp:term-name>some term</ncicp:term-name><ncicp:term-group>PT or another type</ncicp:term-group><ncicp:term-source>NCI or another source</ncicp:term-source><ncicp:source-code>some code</ncicp:source-code> </ncicp:ComplexTerm>
If no source code is required the entire set of tags can be eliminated from the above.
Behavior To Be Aware Of
GF22902 and
GF26478
List of New Features
GForge number |
Brief description of item |
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List of Bug Fixes
GForge number |
Brief description of item |
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23517 |
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26154 |
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26131 |
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Other Items Closed
The defects in the following list were not reproducible, or were fixed as a by-product of refactoring, or were related to configuration setup.
GForge number |
Brief description of item |
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Legacy_Concept_Name issues |
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ReadCommited Cache throws a nullpointer exception. |
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(duplicate of 24360 ) Runtime errors during batch edit |
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Imports ontologies through the metadata tab is not working |
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Error editing concepts from workflow with changes in ConceptType |
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rethink and redesign workflow of pre-merge/pre-retire |
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Make Changes tab show login and log out |
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popup windows are inaccessible in citrix protege |
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Wrong Starting Point for Add/Edit Parent Class -- dup 22786 |
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CORE Product Dependencies
No caCORE dependencies. This software is used for editing and maintaining NCI Thesaurus and BiomedGT
Release History
Release |
Date |
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1.0 |
Jun 07 |
1.1 |
Sept 07 |
1.2.0 |
Dec 07 |
1.2.1 |
Feb 08 |
1.2.2 |
May 08 |
1.2.3 |
Jul 08 |
1.2.3 Patch |
Aug 08 |
1.3.0 |
Mar 09 |
1.4.0 |
Sep 09 |
1.4.1 |
Jan 10 |